RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 F2RL3Q96RI0 385 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 CSF3RQ99062 836 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 ROGDIQ9GZN7 287 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 ADAP2Q9NPF8 381 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 COPG2Q9UBF2 871 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 MTRF1LQ9UGC7 380 aaKnown RBP9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 PTBP2Q9UKA9 531 aaKnown RBP9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 DAPP1Q9UN19 280 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 NPIPA1Q9UND3 350 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 ACOT9Q9Y305 439 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 ASB1Q9Y576 335 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 CLCA3PQ9Y6N3 262 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 CACNA1CQ13936 2221 aa9.02□□□□□ -0.97
NPLOC4-212ENST00000573328 NCOA6Q14686 2063 aaPredicted RBP9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 A0A087X1B8 175 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 MYOCOSA0A1B0GUC4 107 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 ARHGAP10A1A4S6 786 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 SYNDIG1LA6NDD5 238 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 K7EPI3 171 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 RTCAO00442 366 aaKnown RBP9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 TFECO14948 347 aaPredicted RBP9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 NME2P1O60361 137 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 SLC19A2O60779 497 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 PRAMEF4O60810 478 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 ITGA10O75578 1167 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 C1QAP02745 245 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 ABOP16442 354 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 EPB42P16452 691 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 CD22P20273 847 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 NME2P22392 152 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 CA7P43166 264 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 HLCSP50747 726 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 SSR4P51571 173 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 MLF1P58340 268 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 PHEXP78562 749 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 IRF9Q00978 393 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 DLG1Q12959 904 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 TERF2Q15554 542 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 FAM83EQ2M2I3 478 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.01□□□□□ -0.973e-6■□□□□ 10.3
NPLOC4-212ENST00000573328 AP5B1Q2VPB7 878 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 ADPRMQ3LIE5 342 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 ZNF468Q5VIY5 522 aaPredicted RBP9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 PRAMEF9Q5VWM5 478 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 MED27Q6P2C8 311 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 MTFR2Q6P444 385 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 KLC3Q6P597 504 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 ABHD17CQ6PCB6 329 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 ZNF572Q7Z3I7 529 aaPredicted RBP9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 VN1R5Q7Z5H4 357 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 CYP4Z2PQ8N1L4 340 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 TMEM132CQ8N3T6 1108 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 CPSF7Q8N684 471 aaKnown RBP9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 TEX9Q8N6V9 391 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 APCDD1LQ8NCL9 501 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 NFAM1Q8NET5 270 aaPredicted RBP9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 UBTD2Q8WUN7 234 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 RELTQ969Z4 430 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 NXNL1Q96CM4 212 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 WDR34Q96EX3 536 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 CCDC120Q96HB5 630 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 FRMD6Q96NE9 622 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 QRFPRQ96P65 431 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 ATOH8Q96SQ7 321 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 CENPKQ9BS16 269 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 LRRC1Q9BTT6 524 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 MS4A8Q9BY19 250 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 SNX15Q9NRS6 342 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 CPSF2Q9P2I0 782 aaKnown RBP9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 TINAGQ9UJW2 476 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 ZNF490Q9ULM2 529 aaPredicted RBP9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 ERVK-11Q9UQG0 969 aa9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 KLF13Q9Y2Y9 288 aaPredicted RBP9.01□□□□□ -0.97
NPLOC4-212ENST00000573328 ASPDHA6ND91 283 aa9□□□□□ -0.97
NPLOC4-212ENST00000573328 A8MVJ9 347 aa9□□□□□ -0.97
NPLOC4-212ENST00000573328 TGFBR3LH3BV60 316 aa9□□□□□ -0.97
NPLOC4-212ENST00000573328 SAP18O00422 153 aaKnown RBP9□□□□□ -0.97
NPLOC4-212ENST00000573328 CDK2AP1O14519 115 aa9□□□□□ -0.97
NPLOC4-212ENST00000573328 LDB3O75112 727 aa9□□□□□ -0.97
NPLOC4-212ENST00000573328 TBX6O95947 436 aaPredicted RBP9□□□□□ -0.97
NPLOC4-212ENST00000573328 TGFB1P01137 390 aa9□□□□□ -0.97
NPLOC4-212ENST00000573328 EPORP19235 508 aa9□□□□□ -0.97
NPLOC4-212ENST00000573328 TNNI3P19429 210 aa9□□□□□ -0.97
NPLOC4-212ENST00000573328 CPN2P22792 545 aa9□□□□□ -0.97
NPLOC4-212ENST00000573328 TYK2P29597 1187 aa9□□□□□ -0.97
NPLOC4-212ENST00000573328 SERPINB1P30740 379 aa9□□□□□ -0.97
NPLOC4-212ENST00000573328 RFC3P40938 356 aa9□□□□□ -0.97
NPLOC4-212ENST00000573328 MEOX1P50221 254 aa9□□□□□ -0.97
NPLOC4-212ENST00000573328 SERPINB8P50452 374 aa9□□□□□ -0.97
NPLOC4-212ENST00000573328 NAA30Q147X3 362 aaPredicted RBP9□□□□□ -0.97
NPLOC4-212ENST00000573328 ELAVL1Q15717 326 aaKnown RBP9□□□□□ -0.97
NPLOC4-212ENST00000573328 TBCCQ15814 346 aa9□□□□□ -0.97
NPLOC4-212ENST00000573328 C3AR1Q16581 482 aa9□□□□□ -0.97
NPLOC4-212ENST00000573328 PFKFB4Q16877 469 aa9□□□□□ -0.97
NPLOC4-212ENST00000573328 KRTCAP3Q53RY4 240 aa9□□□□□ -0.97
NPLOC4-212ENST00000573328 GRHL2Q6ISB3 625 aa9□□□□□ -0.97
NPLOC4-212ENST00000573328 ZNF793Q6ZN11 406 aa9□□□□□ -0.97
NPLOC4-212ENST00000573328 CEP128Q6ZU80 1094 aa9□□□□□ -0.97
NPLOC4-212ENST00000573328 CHSY3Q70JA7 882 aa9□□□□□ -0.97
NPLOC4-212ENST00000573328 CCDC91Q7Z6B0 441 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms