RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 MISP3Q96FF7 219 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 CERS2Q96G23 380 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 HRASLS5Q96KN8 279 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 CAPZA3Q96KX2 299 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 TUBB6Q9BUF5 446 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 RHBGQ9H310 441 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 PARVBQ9HBI1 364 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 NECTIN3Q9NQS3 549 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 SMYD2Q9NRG4 433 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 GPATCH2Q9NW75 528 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 GFOD1Q9NXC2 390 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 STMN3Q9NZ72 180 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 ASIC3Q9UHC3 531 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 MRFAP1Q9Y605 127 aa8.65□□□□□ -1.02
NPLOC4-210ENST00000572824 FREM3P0C091 2139 aa8.65□□□□□ -1.03
NPLOC4-210ENST00000572824 AKAP6Q13023 2319 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 KCNE1BA0A087WTH5 132 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 GABRR3A8MPY1 467 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 KIAA1324LA8MWY0 1029 aaPredicted RBP8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 H0YIG0 161 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 AP3B1O00203 1094 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 CCL21O00585 134 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 PRPF4O43172 522 aaKnown RBP eCLIP8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 CHST10O43529 356 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 PRKNO60260 465 aaPredicted RBP8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 SUSD5O60279 629 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 GALR3O60755 368 aaPredicted RBP8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 PRAMEF4O60810 478 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 NEURL1O76050 574 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 RASAL1O95294 804 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 TBX6O95947 436 aaPredicted RBP8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 GDF5P43026 501 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 CA7P43166 264 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 SLC26A5P58743 744 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 REEP5Q00765 189 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 PTK6Q13882 451 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 PPP1R7Q15435 360 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 PPP1R3AQ16821 1122 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 TEDDM1Q5T9Z0 273 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 PRAMEF9Q5VWM5 478 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 SP5Q6BEB4 398 aaPredicted RBP8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 PLAG1Q6DJT9 500 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 GALNTL5Q7Z4T8 443 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 TMPRSS11BQ86T26 416 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 TSPYL5Q86VY4 417 aaPredicted RBP8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 SIAH3Q8IW03 269 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 CEP97Q8IW35 865 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 MCEMP1Q8IX19 187 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 KLHL7Q8IXQ5 586 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 MYO1HQ8N1T3 1032 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 AFAP1L2Q8N4X5 818 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 OR56A3Q8NH54 315 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 UTP15Q8TED0 518 aaKnown RBP8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 THAP3Q8WTV1 239 aaPredicted RBP8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 RELTQ969Z4 430 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 PBKQ96KB5 322 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 EBNA1BP2Q99848 306 aaKnown RBP8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 TRIM31Q9BZY9 425 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 LIN28AQ9H9Z2 209 aaKnown RBP8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 KCNK13Q9HB14 408 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 ANKHQ9HCJ1 492 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 ARL15Q9NXU5 204 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 WHRNQ9P202 907 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 ABI3Q9P2A4 366 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 KLHL42Q9P2K6 505 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 COPG2Q9UBF2 871 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 SEC14L3Q9UDX4 400 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 ZNF223Q9UK11 482 aaPredicted RBP8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 JRKLQ9Y4A0 524 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 ASB1Q9Y576 335 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 CLDN16Q9Y5I7 305 aa8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 ANKRD17O75179 2603 aaKnown RBP8.64□□□□□ -1.03
NPLOC4-210ENST00000572824 HIVEP1P15822 2718 aa8.63□□□□□ -1.03
NPLOC4-210ENST00000572824 KIAA1549Q9HCM3 1950 aa8.63□□□□□ -1.03
NPLOC4-210ENST00000572824 A0A0G2JMM0 328 aa8.63□□□□□ -1.03
NPLOC4-210ENST00000572824 A0A1W2PPB8 328 aa8.63□□□□□ -1.03
NPLOC4-210ENST00000572824 A0A1W2PRS3 328 aa8.63□□□□□ -1.03
NPLOC4-210ENST00000572824 ZNF839A8K0R7 811 aa8.63□□□□□ -1.03
NPLOC4-210ENST00000572824 KIR3DP1A8MWS1 328 aa8.63□□□□□ -1.03
NPLOC4-210ENST00000572824 NPIPA5E9PKD4 350 aa8.63□□□□□ -1.03
NPLOC4-210ENST00000572824 PFDN6O15212 129 aa8.63□□□□□ -1.03
NPLOC4-210ENST00000572824 PDPK1O15530 556 aa8.63□□□□□ -1.03
NPLOC4-210ENST00000572824 KLHL41O60662 606 aa8.63□□□□□ -1.03
NPLOC4-210ENST00000572824 SLC19A2O60779 497 aa8.63□□□□□ -1.03
NPLOC4-210ENST00000572824 C8GP07360 202 aa8.63□□□□□ -1.03
NPLOC4-210ENST00000572824 FHP07954 510 aa8.63□□□□□ -1.03
NPLOC4-210ENST00000572824 TPP2P29144 1249 aaPredicted RBP8.63□□□□□ -1.03
NPLOC4-210ENST00000572824 PTGER1P34995 402 aa8.63□□□□□ -1.03
NPLOC4-210ENST00000572824 HSD17B2P37059 387 aa8.63□□□□□ -1.03
NPLOC4-210ENST00000572824 FNTAP49354 379 aa8.63□□□□□ -1.03
NPLOC4-210ENST00000572824 OR4D2P58180 307 aa8.63□□□□□ -1.03
NPLOC4-210ENST00000572824 SARNPP82979 210 aaKnown RBP8.63□□□□□ -1.03
NPLOC4-210ENST00000572824 SP140Q13342 867 aa8.63□□□□□ -1.03
NPLOC4-210ENST00000572824 NAA25Q14CX7 972 aa8.63□□□□□ -1.03
NPLOC4-210ENST00000572824 NSDHLQ15738 373 aa8.63□□□□□ -1.03
NPLOC4-210ENST00000572824 NDUFA9Q16795 377 aa8.63□□□□□ -1.03
NPLOC4-210ENST00000572824 H3F3CQ6NXT2 135 aa8.63□□□□□ -1.03
NPLOC4-210ENST00000572824 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.63□□□□□ -1.03
NPLOC4-210ENST00000572824 MRGPRGQ86SM5 289 aa8.63□□□□□ -1.03
NPLOC4-210ENST00000572824 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms