RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 IFT88Q13099 833 aa12.57□□□□□ -0.4
CCDC40-205ENST00000571028 ART3Q13508 389 aa12.57□□□□□ -0.4
CCDC40-205ENST00000571028 PWP1Q13610 501 aa12.57□□□□□ -0.4
CCDC40-205ENST00000571028 SYT16Q17RD7 645 aa12.57□□□□□ -0.4
CCDC40-205ENST00000571028 DEFB134Q4QY38 66 aa12.57□□□□□ -0.4
CCDC40-205ENST00000571028 TCHHL1Q5QJ38 904 aaPredicted RBP12.57□□□□□ -0.4
CCDC40-205ENST00000571028 DCAF10Q5QP82 559 aa12.57□□□□□ -0.4
CCDC40-205ENST00000571028 YOD1Q5VVQ6 348 aaPredicted RBP12.57□□□□□ -0.4
CCDC40-205ENST00000571028 GARNL3Q5VVW2 1013 aa12.57□□□□□ -0.4
CCDC40-205ENST00000571028 TMEM214Q6NUQ4 689 aaKnown RBP12.57□□□□□ -0.4
CCDC40-205ENST00000571028 SCIMPQ6UWF3 145 aa12.57□□□□□ -0.4
CCDC40-205ENST00000571028 SHISA6Q6ZSJ9 500 aa12.57□□□□□ -0.4
CCDC40-205ENST00000571028 FRMD7Q6ZUT3 714 aa12.57□□□□□ -0.4
CCDC40-205ENST00000571028 PARP9Q8IXQ6 854 aa12.57□□□□□ -0.4
CCDC40-205ENST00000571028 HUS1BQ8NHY5 278 aa12.57□□□□□ -0.4
CCDC40-205ENST00000571028 PROKR1Q8TCW9 393 aa12.57□□□□□ -0.4
CCDC40-205ENST00000571028 AGR3Q8TD06 166 aa12.57□□□□□ -0.4
CCDC40-205ENST00000571028 GRHL3Q8TE85 626 aa12.57□□□□□ -0.4
CCDC40-205ENST00000571028 REPS1Q96D71 796 aa12.57□□□□□ -0.4
CCDC40-205ENST00000571028 KCNA7Q96RP8 456 aa12.57□□□□□ -0.4
CCDC40-205ENST00000571028 DPH2Q9BQC3 489 aaPredicted RBP12.57□□□□□ -0.4
CCDC40-205ENST00000571028 PITHD1Q9GZP4 211 aaPredicted RBP12.57□□□□□ -0.4
CCDC40-205ENST00000571028 OR51B5Q9H339 312 aa12.57□□□□□ -0.4
CCDC40-205ENST00000571028 ELOVL6Q9H5J4 265 aa12.57□□□□□ -0.4
CCDC40-205ENST00000571028 CHST11Q9NPF2 352 aa12.57□□□□□ -0.4
CCDC40-205ENST00000571028 HCN3Q9P1Z3 774 aa12.57□□□□□ -0.4
CCDC40-205ENST00000571028 NAALAD2Q9Y3Q0 740 aa12.57□□□□□ -0.4
CCDC40-205ENST00000571028 TIMM22Q9Y584 194 aa12.57□□□□□ -0.4
CCDC40-205ENST00000571028 KLF2Q9Y5W3 355 aaPredicted RBP12.57□□□□□ -0.4
CCDC40-205ENST00000571028 CROCCQ5TZA2 2017 aa12.57□□□□□ -0.4
CCDC40-205ENST00000571028 SPTBP11277 2137 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 PDZD2O15018 2839 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 NF1P21359 2839 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 URADA6NGE7 173 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 MAGEB17A8MXT2 336 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 UBFD1O14562 309 aaKnown RBP12.56□□□□□ -0.4
CCDC40-205ENST00000571028 ERI3O43414 337 aaKnown RBP12.56□□□□□ -0.4
CCDC40-205ENST00000571028 UGDHO60701 494 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 RDH16O75452 317 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 CLEC3AO75596 197 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 KLHL18O94889 574 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 CAPN1P07384 714 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 SERPINA6P08185 405 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 PIM1P11309 404 aaPredicted RBP12.56□□□□□ -0.4
CCDC40-205ENST00000571028 SERPINB3P29508 390 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 HNRNPH1P31943 449 aaKnown RBP12.56□□□□□ -0.4
CCDC40-205ENST00000571028 FOLR3P41439 243 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 GCGRP47871 477 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 RAP1GDS1P52306 607 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 PKNOX1P55347 436 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 RPS13P62277 151 aaKnown RBP12.56□□□□□ -0.4
CCDC40-205ENST00000571028 OLR1P78380 273 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 PCDH1Q08174 1060 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 HYAL2Q12891 473 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 CHI3L2Q15782 390 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 VWA2Q5GFL6 755 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 CRB2Q5IJ48 1285 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 IRAK1BP1Q5VVH5 260 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 FAM180AQ6UWF9 173 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 ABHD13Q7L211 337 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 LAS2Q8IYD9 372 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 METTL6Q8TCB7 284 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 UTP15Q8TED0 518 aaKnown RBP12.56□□□□□ -0.4
CCDC40-205ENST00000571028 ZNF473Q8WTR7 871 aaKnown RBP12.56□□□□□ -0.4
CCDC40-205ENST00000571028 SELENOMQ8WWX9 145 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 FAR2Q96K12 515 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 CNDP1Q96KN2 507 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 ZNF382Q96SR6 550 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 HBEGFQ99075 208 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 SLC6A16Q9GZN6 736 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 REXO4Q9GZR2 422 aaKnown RBP12.56□□□□□ -0.4
CCDC40-205ENST00000571028 AICDAQ9GZX7 198 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 RHBGQ9H310 441 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 ZNF552Q9H707 407 aaPredicted RBP12.56□□□□□ -0.4
CCDC40-205ENST00000571028 SLC22A11Q9NSA0 550 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 FARSBQ9NSD9 589 aaKnown RBP12.56□□□□□ -0.4
CCDC40-205ENST00000571028 TRPC4Q9UBN4 977 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 SUCOQ9UBS9 1254 aaKnown RBP12.56□□□□□ -0.4
CCDC40-205ENST00000571028 TRPS1Q9UHF7 1281 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 ZNF225Q9UK10 706 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 CDC14AQ9UNH5 594 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 STK38LQ9Y2H1 464 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 HEATR5BQ9P2D3 2071 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 CSMD2Q7Z408 3487 aa12.56□□□□□ -0.4
CCDC40-205ENST00000571028 C4orf51C9J302 202 aa12.55□□□□□ -0.4
CCDC40-205ENST00000571028 H0YIV9 168 aa12.55□□□□□ -0.4
CCDC40-205ENST00000571028 RTCAO00442 366 aaKnown RBP12.55□□□□□ -0.4
CCDC40-205ENST00000571028 MANBAO00462 879 aa12.55□□□□□ -0.4
CCDC40-205ENST00000571028 DNAJB6O75190 326 aa12.55□□□□□ -0.4
CCDC40-205ENST00000571028 LYPLA1O75608 230 aaPredicted RBP12.55□□□□□ -0.4
CCDC40-205ENST00000571028 CHRNGP07510 517 aa12.55□□□□□ -0.4
CCDC40-205ENST00000571028 ALOX12P18054 663 aa12.55□□□□□ -0.4
CCDC40-205ENST00000571028 ITGAXP20702 1163 aa12.55□□□□□ -0.4
CCDC40-205ENST00000571028 BGNP21810 368 aa12.55□□□□□ -0.4
CCDC40-205ENST00000571028 EMP3P54852 163 aa12.55□□□□□ -0.4
CCDC40-205ENST00000571028 FOXA1P55317 472 aa12.55□□□□□ -0.4
CCDC40-205ENST00000571028 E2F2Q14209 437 aa12.55□□□□□ -0.4
CCDC40-205ENST00000571028 SSPNQ14714 243 aa12.55□□□□□ -0.4
CCDC40-205ENST00000571028 MFSD4BQ5TF39 518 aa12.55□□□□□ -0.4
CCDC40-205ENST00000571028 FRG2Q64ET8 278 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms