RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 RNF31Q96EP0 1072 aa14.59□□□□□ -0.07
HERPUD1-219ENST00000570273 MMABQ96EY8 250 aaPredicted RBP14.59□□□□□ -0.07
HERPUD1-219ENST00000570273 LIN37Q96GY3 246 aaPredicted RBP14.59□□□□□ -0.07
HERPUD1-219ENST00000570273 CTRCQ99895 268 aa14.59□□□□□ -0.07
HERPUD1-219ENST00000570273 SLC25A23Q9BV35 468 aa14.59□□□□□ -0.07
HERPUD1-219ENST00000570273 NPLQ9BXD5 320 aaPredicted RBP14.59□□□□□ -0.07
HERPUD1-219ENST00000570273 REEP4Q9H6H4 257 aa14.59□□□□□ -0.07
HERPUD1-219ENST00000570273 ACTR5Q9H9F9 607 aaPredicted RBP14.59□□□□□ -0.07
HERPUD1-219ENST00000570273 LYRM4Q9HD34 91 aa14.59□□□□□ -0.07
HERPUD1-219ENST00000570273 MIEF1Q9NQG6 463 aa14.59□□□□□ -0.07
HERPUD1-219ENST00000570273 TXLNGQ9NUQ3 528 aa14.59□□□□□ -0.07
HERPUD1-219ENST00000570273 HCN3Q9P1Z3 774 aa14.59□□□□□ -0.07
HERPUD1-219ENST00000570273 DHCR7Q9UBM7 475 aaKnown RBP14.59□□□□□ -0.07
HERPUD1-219ENST00000570273 ATG4BQ9Y4P1 393 aa14.59□□□□□ -0.07
HERPUD1-219ENST00000570273 SPACA6W5XKT8 324 aa14.59□□□□□ -0.07
HERPUD1-219ENST00000570273 LOC100653049A0A140TA62 436 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 A0A1B0GX78 115 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 ERICH4A6NGS2 130 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 B4E171 279 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 TM4SF5O14894 197 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 DSCR3O14972 297 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 SCRG1O75711 98 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 KRT34O76011 436 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 AIFM1O95831 613 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 ATXN8OSP0DMR3 200 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 NR2F6P10588 404 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 FGF5P12034 268 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 CEACAM1P13688 526 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 DDCP20711 480 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 CAPN3P20807 821 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 ALAS2P22557 587 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 CPN2P22792 545 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 BUD31P41223 144 aaPredicted RBP14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 TSPAN7P41732 249 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 ZFP36L2P47974 494 aaKnown RBP14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 LIM2P55344 173 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 MC1RQ01726 317 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 TNFRSF17Q02223 184 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 IL11RAQ14626 422 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 HEPACAMQ14CZ8 416 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 UGT8Q16880 541 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 PGS1Q32NB8 556 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 FAM174BQ3ZCQ3 159 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 SPANXN4Q5MJ08 99 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 NDUFAF5Q5TEU4 345 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 C1orf189Q5VU69 101 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 ANKRD26P1Q6NSI1 321 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 PWWP2BQ6NUJ5 590 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 RAB11FIP2Q7L804 512 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 R3HCC1LQ7Z5L2 792 aaKnown RBP14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 BPHLQ86WA6 291 aaPredicted RBP14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 CA13Q8N1Q1 262 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 OR7A2PQ8NGA2 310 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 RP9Q8TA86 221 aaKnown RBP14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 TESCQ96BS2 214 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 PPCDCQ96CD2 204 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 SPDL1Q96EA4 605 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 MVB12AQ96EY5 273 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 NSL1Q96IY1 281 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 PRPF18Q99633 342 aaKnown RBP14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 SLC39A1Q9NY26 324 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 ATP6V1HQ9UI12 483 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 DAPP1Q9UN19 280 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 CDC14AQ9UNH5 594 aa14.58□□□□□ -0.07
HERPUD1-219ENST00000570273 CCDC187A0A096LP49 1063 aa14.58□□□□□ -0.08
HERPUD1-219ENST00000570273 A0A1W2PR48 441 aa14.58□□□□□ -0.08
HERPUD1-219ENST00000570273 CCDC154A6NI56 674 aa14.58□□□□□ -0.08
HERPUD1-219ENST00000570273 ANGPT2O15123 496 aa14.58□□□□□ -0.08
HERPUD1-219ENST00000570273 CFLARO15519 480 aa14.58□□□□□ -0.08
HERPUD1-219ENST00000570273 DNAJB6O75190 326 aa14.58□□□□□ -0.08
HERPUD1-219ENST00000570273 KIAA0754O94854 1291 aa14.58□□□□□ -0.08
HERPUD1-219ENST00000570273 TIAF1O95411 115 aa14.58□□□□□ -0.08
HERPUD1-219ENST00000570273 FURINP09958 794 aa14.58□□□□□ -0.08
HERPUD1-219ENST00000570273 ESRRAP11474 423 aaPredicted RBP14.58□□□□□ -0.08
HERPUD1-219ENST00000570273 S100A3P33764 101 aa14.58□□□□□ -0.08
HERPUD1-219ENST00000570273 CPA2P48052 419 aa14.58□□□□□ -0.08
HERPUD1-219ENST00000570273 DGKQP52824 942 aa14.58□□□□□ -0.08
HERPUD1-219ENST00000570273 RAB38P57729 211 aa14.58□□□□□ -0.08
HERPUD1-219ENST00000570273 SHC2P98077 582 aa14.58□□□□□ -0.08
HERPUD1-219ENST00000570273 MAT1AQ00266 395 aaKnown RBP14.58□□□□□ -0.08
HERPUD1-219ENST00000570273 PDE7AQ13946 482 aa14.58□□□□□ -0.08
HERPUD1-219ENST00000570273 DPY19L1Q2PZI1 675 aa14.58□□□□□ -0.08
HERPUD1-219ENST00000570273 VPS26BQ4G0F5 336 aa14.58□□□□□ -0.08
HERPUD1-219ENST00000570273 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.58□□□□□ -0.08
HERPUD1-219ENST00000570273 CPTPQ5TA50 214 aa14.58□□□□□ -0.08
HERPUD1-219ENST00000570273 TICAM1Q8IUC6 712 aa14.58□□□□□ -0.08
HERPUD1-219ENST00000570273 FAM47BQ8NA70 645 aa14.58□□□□□ -0.08
HERPUD1-219ENST00000570273 VPS33AQ96AX1 596 aa14.58□□□□□ -0.08
HERPUD1-219ENST00000570273 MTERF3Q96E29 417 aa14.58□□□□□ -0.08
HERPUD1-219ENST00000570273 TUBB6Q9BUF5 446 aa14.58□□□□□ -0.08
HERPUD1-219ENST00000570273 WDR41Q9HAD4 459 aa14.58□□□□□ -0.08
HERPUD1-219ENST00000570273 DLL3Q9NYJ7 618 aa14.58□□□□□ -0.08
HERPUD1-219ENST00000570273 SH3BP4Q9P0V3 963 aa14.58□□□□□ -0.08
HERPUD1-219ENST00000570273 PISDQ9UG56 409 aa14.58□□□□□ -0.08
HERPUD1-219ENST00000570273 EXO1Q9UQ84 846 aaKnown RBP14.58□□□□□ -0.08
HERPUD1-219ENST00000570273 MAU2Q9Y6X3 613 aa14.58□□□□□ -0.08
HERPUD1-219ENST00000570273 DYTNA2CJ06 578 aa14.57□□□□□ -0.08
HERPUD1-219ENST00000570273 BBIP1A8MTZ0 92 aa14.57□□□□□ -0.08
HERPUD1-219ENST00000570273 H0YIG0 161 aa14.57□□□□□ -0.08
HERPUD1-219ENST00000570273 CHST10O43529 356 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms