RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 SNX25Q9H3E2 840 aa3.45□□□□□ -1.86
UBR1-211ENST00000569971 AGPAT3Q9NRZ7 376 aa3.45□□□□□ -1.86
UBR1-211ENST00000569971 IARS2Q9NSE4 1012 aaKnown RBP3.45□□□□□ -1.86
UBR1-211ENST00000569971 DNAJC17Q9NVM6 304 aaKnown RBP3.45□□□□□ -1.86
UBR1-211ENST00000569971 DMAC2Q9NW81 257 aa3.45□□□□□ -1.86
UBR1-211ENST00000569971 TXNDC16Q9P2K2 825 aa3.45□□□□□ -1.86
UBR1-211ENST00000569971 HPCAL4Q9UM19 191 aa3.45□□□□□ -1.86
UBR1-211ENST00000569971 EXOC7Q9UPT5 735 aa3.45□□□□□ -1.86
UBR1-211ENST00000569971 WDR83OSQ9Y284 106 aa3.45□□□□□ -1.86
UBR1-211ENST00000569971 DLGAP4Q9Y2H0 992 aa3.45□□□□□ -1.86
UBR1-211ENST00000569971 CNTNAP1P78357 1384 aa3.45□□□□□ -1.86
UBR1-211ENST00000569971 LOXHD1Q8IVV2 1947 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 SCN9AQ15858 1988 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 CASTOR2A6NHX0 329 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 GOLGA6L10A6NI86 522 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 SDR42E2A6NKP2 422 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 E9PI62 339 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 F8VZ95 297 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 H0YCG3 227 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 RTCAO00442 366 aaKnown RBP3.44□□□□□ -1.86
UBR1-211ENST00000569971 GAPDHSO14556 408 aaPredicted RBP3.44□□□□□ -1.86
UBR1-211ENST00000569971 MAPK13O15264 365 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 RTN2O75298 545 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 SLC22A3O75751 556 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 ERLIN2O94905 339 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 LUC7L3O95232 432 aaKnown RBP3.44□□□□□ -1.86
UBR1-211ENST00000569971 LYPLA2O95372 231 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 SLC16A8O95907 504 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 PLGP00747 810 aaPredicted RBP3.44□□□□□ -1.86
UBR1-211ENST00000569971 INHBAP08476 426 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 T-ENOLP0DO92 83 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 UROSP10746 265 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 HSPA8P11142 646 aaKnown RBP3.44□□□□□ -1.86
UBR1-211ENST00000569971 FCGR1AP12314 374 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 P4HA1P13674 534 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 RPS12P25398 132 aaKnown RBP3.44□□□□□ -1.86
UBR1-211ENST00000569971 CCND2P30279 289 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 SLC6A6P31641 620 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 AHRP35869 848 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 CASP3P42574 277 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 QARSP47897 775 aaKnown RBP3.44□□□□□ -1.86
UBR1-211ENST00000569971 CASP4P49662 377 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 DNA2P51530 1060 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 MLLT10P55197 1068 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 FOXG1P55316 489 aaPredicted RBP3.44□□□□□ -1.86
UBR1-211ENST00000569971 YBEYP58557 167 aaPredicted RBP3.44□□□□□ -1.86
UBR1-211ENST00000569971 PSMC5P62195 406 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 CX3CL1P78423 397 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 GUCY2DQ02846 1103 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 EEF1A2Q05639 463 aaKnown RBP3.44□□□□□ -1.86
UBR1-211ENST00000569971 ZBTB17Q13105 803 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 CUL1Q13616 776 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 NPTX1Q15818 432 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 ZSCAN26Q16670 478 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 UGT3A2Q3SY77 523 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 ZC2HC1CQ53FD0 456 aaPredicted RBP3.44□□□□□ -1.86
UBR1-211ENST00000569971 ELFN2Q5R3F8 820 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 IRAK1BP1Q5VVH5 260 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 PODNL1Q6PEZ8 512 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 OTUD6AQ7L8S5 288 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 ZNF571Q7Z3V5 609 aaPredicted RBP3.44□□□□□ -1.86
UBR1-211ENST00000569971 C12orf56Q8IXR9 622 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 DCP1BQ8IZD4 617 aaKnown RBP3.44□□□□□ -1.86
UBR1-211ENST00000569971 FBXL14Q8N1E6 418 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 MUC20Q8N307 709 aaPredicted RBP3.44□□□□□ -1.86
UBR1-211ENST00000569971 SFRP1Q8N474 314 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 PPFIBP2Q8ND30 876 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 LILRB1Q8NHL6 650 aaPredicted RBP3.44□□□□□ -1.86
UBR1-211ENST00000569971 CCDC26Q8TAB7 109 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 OLIG1Q8TAK6 271 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 FAM76AQ8TAV0 307 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 ACTRT1Q8TDG2 376 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 U2AF1L4Q8WU68 220 aaKnown RBP3.44□□□□□ -1.86
UBR1-211ENST00000569971 CCDC107Q8WV48 283 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 IFT81Q8WYA0 676 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 ATP6V0A1Q93050 837 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 PHF21BQ96EK2 531 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 ABHD8Q96I13 439 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 MS4A14Q96JA4 679 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 CDHR1Q96JP9 859 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 SGK494Q96LW2 274 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 ZNF385AQ96PM9 386 aaKnown RBP3.44□□□□□ -1.86
UBR1-211ENST00000569971 KLHL5Q96PQ7 755 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 ATP6V0BQ99437 205 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 KRT12Q99456 494 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 NTPCRQ9BSD7 190 aaKnown RBP3.44□□□□□ -1.86
UBR1-211ENST00000569971 PRRG4Q9BZD6 226 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 FAM107BQ9H098 131 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 TSPYL1Q9H0U9 437 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 RAB9BQ9NP90 201 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 MYOZ2Q9NPC6 264 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 SIX2Q9NPC8 291 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 ZNF701Q9NV72 531 aaPredicted RBP3.44□□□□□ -1.86
UBR1-211ENST00000569971 SLC38A7Q9NVC3 462 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 AKAP7Q9P0M2 348 aaPredicted RBP3.44□□□□□ -1.86
UBR1-211ENST00000569971 DAPK2Q9UIK4 370 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 DNAJC12Q9UKB3 198 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 POU2F3Q9UKI9 436 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 UBIAD1Q9Y5Z9 338 aa3.44□□□□□ -1.86
UBR1-211ENST00000569971 PFASO15067 1338 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms