RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 PNO1Q9NRX1 252 aaKnown RBP12.9□□□□□ -0.34
GTF3C1-211ENST00000569653 DNAJC11Q9NVH1 559 aa12.9□□□□□ -0.34
GTF3C1-211ENST00000569653 WWOXQ9NZC7 414 aa12.9□□□□□ -0.34
GTF3C1-211ENST00000569653 SUCOQ9UBS9 1254 aaKnown RBP12.9□□□□□ -0.34
GTF3C1-211ENST00000569653 MEMO1Q9Y316 297 aa12.9□□□□□ -0.34
GTF3C1-211ENST00000569653 PHF3Q92576 2039 aaKnown RBP12.89□□□□□ -0.35
GTF3C1-211ENST00000569653 URADA6NGE7 173 aa12.89□□□□□ -0.35
GTF3C1-211ENST00000569653 RTCAO00442 366 aaKnown RBP12.89□□□□□ -0.35
GTF3C1-211ENST00000569653 SLC35E2BP0CK96 405 aa12.89□□□□□ -0.35
GTF3C1-211ENST00000569653 MYBL2P10244 700 aa12.89□□□□□ -0.35
GTF3C1-211ENST00000569653 ZNF24P17028 368 aa12.89□□□□□ -0.35
GTF3C1-211ENST00000569653 CYB561P49447 251 aa12.89□□□□□ -0.35
GTF3C1-211ENST00000569653 MEOX1P50221 254 aa12.89□□□□□ -0.35
GTF3C1-211ENST00000569653 LIM2P55344 173 aa12.89□□□□□ -0.35
GTF3C1-211ENST00000569653 GPR85P60893 370 aa12.89□□□□□ -0.35
GTF3C1-211ENST00000569653 STXBP1P61764 594 aaKnown RBP12.89□□□□□ -0.35
GTF3C1-211ENST00000569653 SLC7A5Q01650 507 aa12.89□□□□□ -0.35
GTF3C1-211ENST00000569653 E2F2Q14209 437 aa12.89□□□□□ -0.35
GTF3C1-211ENST00000569653 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.89□□□□□ -0.351e-7■□□□□ 9.7
GTF3C1-211ENST00000569653 KBTBD12Q3ZCT8 623 aa12.89□□□□□ -0.35
GTF3C1-211ENST00000569653 KRTCAP3Q53RY4 240 aa12.89□□□□□ -0.35
GTF3C1-211ENST00000569653 CCDC25Q86WR0 208 aa12.89□□□□□ -0.35
GTF3C1-211ENST00000569653 DOLPP1Q86YN1 238 aa12.89□□□□□ -0.35
GTF3C1-211ENST00000569653 SULF2Q8IWU5 870 aa12.89□□□□□ -0.35
GTF3C1-211ENST00000569653 ZNF295-AS1Q8N0V1 137 aa12.89□□□□□ -0.35
GTF3C1-211ENST00000569653 RNF175Q8N4F7 328 aa12.89□□□□□ -0.35
GTF3C1-211ENST00000569653 MARVELD2Q8N4S9 558 aa12.89□□□□□ -0.35
GTF3C1-211ENST00000569653 OR2L5Q8NG80 312 aa12.89□□□□□ -0.35
GTF3C1-211ENST00000569653 EXT2Q93063 718 aa12.89□□□□□ -0.35
GTF3C1-211ENST00000569653 MAGED4Q96JG8 741 aa12.89□□□□□ -0.35
GTF3C1-211ENST00000569653 DMRTA2Q96SC8 542 aa12.89□□□□□ -0.35
GTF3C1-211ENST00000569653 LRRC1Q9BTT6 524 aa12.89□□□□□ -0.35
GTF3C1-211ENST00000569653 NPLQ9BXD5 320 aaPredicted RBP12.89□□□□□ -0.35
GTF3C1-211ENST00000569653 DEFB126Q9BYW3 111 aa12.89□□□□□ -0.35
GTF3C1-211ENST00000569653 TRIM8Q9BZR9 551 aa12.89□□□□□ -0.35
GTF3C1-211ENST00000569653 EHD1Q9H4M9 534 aa12.89□□□□□ -0.35
GTF3C1-211ENST00000569653 IGSF5Q9NSI5 407 aa12.89□□□□□ -0.35
GTF3C1-211ENST00000569653 GPRC5BQ9NZH0 403 aa12.89□□□□□ -0.35
GTF3C1-211ENST00000569653 TXNDC16Q9P2K2 825 aa12.89□□□□□ -0.35
GTF3C1-211ENST00000569653 DAPP1Q9UN19 280 aa12.89□□□□□ -0.35
GTF3C1-211ENST00000569653 F8P00451 2351 aa12.89□□□□□ -0.35
GTF3C1-211ENST00000569653 HIVEP1P15822 2718 aa12.89□□□□□ -0.35
GTF3C1-211ENST00000569653 INTS1Q8N201 2190 aaKnown RBP12.88□□□□□ -0.35
GTF3C1-211ENST00000569653 ESYT3A0FGR9 886 aa12.88□□□□□ -0.35
GTF3C1-211ENST00000569653 HMX2A2RU54 273 aa12.88□□□□□ -0.35
GTF3C1-211ENST00000569653 ESPNB1AK53 854 aa12.88□□□□□ -0.35
GTF3C1-211ENST00000569653 SH3BGRLO75368 114 aa12.88□□□□□ -0.35
GTF3C1-211ENST00000569653 ITGA10O75578 1167 aa12.88□□□□□ -0.35
GTF3C1-211ENST00000569653 STK16O75716 305 aa12.88□□□□□ -0.35
GTF3C1-211ENST00000569653 CTAGE8P0CG41 777 aa12.88□□□□□ -0.35
GTF3C1-211ENST00000569653 GP5P40197 560 aa12.88□□□□□ -0.35
GTF3C1-211ENST00000569653 KIR3DL1P43629 444 aa12.88□□□□□ -0.35
GTF3C1-211ENST00000569653 CLCN2P51788 898 aa12.88□□□□□ -0.35
GTF3C1-211ENST00000569653 HSD17B7P56937 341 aa12.88□□□□□ -0.35
GTF3C1-211ENST00000569653 RBPJQ06330 500 aa12.88□□□□□ -0.35
GTF3C1-211ENST00000569653 TERF2Q15554 542 aa12.88□□□□□ -0.35
GTF3C1-211ENST00000569653 PDK4Q16654 411 aa12.88□□□□□ -0.35
GTF3C1-211ENST00000569653 CMPK2Q5EBM0 449 aa12.88□□□□□ -0.35
GTF3C1-211ENST00000569653 SULT1C3Q6IMI6 304 aa12.88□□□□□ -0.35
GTF3C1-211ENST00000569653 RPTNQ6XPR3 784 aa12.88□□□□□ -0.35
GTF3C1-211ENST00000569653 CEP128Q6ZU80 1094 aa12.88□□□□□ -0.35
GTF3C1-211ENST00000569653 CYS1Q717R9 158 aa12.88□□□□□ -0.35
GTF3C1-211ENST00000569653 ISCA2Q86U28 154 aa12.88□□□□□ -0.35
GTF3C1-211ENST00000569653 CTAGE4Q8IX94 777 aa12.88□□□□□ -0.35
GTF3C1-211ENST00000569653 MMGT1Q8N4V1 131 aa12.88□□□□□ -0.35
GTF3C1-211ENST00000569653 SNX31Q8N9S9 440 aa12.88□□□□□ -0.35
GTF3C1-211ENST00000569653 NOA1Q8NC60 698 aaKnown RBP12.88□□□□□ -0.35
GTF3C1-211ENST00000569653 AGAP11Q8TF27 550 aa12.88□□□□□ -0.35
GTF3C1-211ENST00000569653 ZNF473Q8WTR7 871 aaKnown RBP12.88□□□□□ -0.35
GTF3C1-211ENST00000569653 PTPMT1Q8WUK0 201 aaPredicted RBP12.88□□□□□ -0.35
GTF3C1-211ENST00000569653 KIAA1191Q96A73 305 aa12.88□□□□□ -0.35
GTF3C1-211ENST00000569653 PTCD3Q96EY7 689 aaKnown RBP12.88□□□□□ -0.35
GTF3C1-211ENST00000569653 VMP1Q96GC9 406 aa12.88□□□□□ -0.35
GTF3C1-211ENST00000569653 ATOH8Q96SQ7 321 aa12.88□□□□□ -0.35
GTF3C1-211ENST00000569653 CPNE1Q99829 537 aa12.88□□□□□ -0.35
GTF3C1-211ENST00000569653 MAPKAP1Q9BPZ7 522 aa12.88□□□□□ -0.35
GTF3C1-211ENST00000569653 SORBS1Q9BX66 1292 aaKnown RBP12.88□□□□□ -0.35
GTF3C1-211ENST00000569653 MS4A8Q9BY19 250 aa12.88□□□□□ -0.35
GTF3C1-211ENST00000569653 REXO4Q9GZR2 422 aaKnown RBP12.88□□□□□ -0.35
GTF3C1-211ENST00000569653 ALG9Q9H6U8 611 aa12.88□□□□□ -0.35
GTF3C1-211ENST00000569653 FBXW2Q9UKT8 454 aa12.88□□□□□ -0.35
GTF3C1-211ENST00000569653 FREM3P0C091 2139 aa12.88□□□□□ -0.35
GTF3C1-211ENST00000569653 UBXN8O00124 270 aa12.87□□□□□ -0.35
GTF3C1-211ENST00000569653 B3GALT2O43825 422 aa12.87□□□□□ -0.35
GTF3C1-211ENST00000569653 H2AFYO75367 372 aaKnown RBP12.87□□□□□ -0.35
GTF3C1-211ENST00000569653 OR6B1O95007 311 aa12.87□□□□□ -0.35
GTF3C1-211ENST00000569653 MTHFD2P13995 350 aa12.87□□□□□ -0.35
GTF3C1-211ENST00000569653 STMN1P16949 149 aa12.87□□□□□ -0.35
GTF3C1-211ENST00000569653 TFEBP19484 476 aa12.87□□□□□ -0.35
GTF3C1-211ENST00000569653 STX2P32856 288 aa12.87□□□□□ -0.35
GTF3C1-211ENST00000569653 MAGEA4P43358 317 aa12.87□□□□□ -0.35
GTF3C1-211ENST00000569653 SLC12A2P55011 1212 aa12.87□□□□□ -0.35
GTF3C1-211ENST00000569653 RAB10P61026 200 aa12.87□□□□□ -0.35
GTF3C1-211ENST00000569653 ATP6V0D1P61421 351 aa12.87□□□□□ -0.35
GTF3C1-211ENST00000569653 IRF9Q00978 393 aa12.87□□□□□ -0.35
GTF3C1-211ENST00000569653 ID2Q02363 134 aa12.87□□□□□ -0.35
GTF3C1-211ENST00000569653 GUCY2DQ02846 1103 aa12.87□□□□□ -0.35
GTF3C1-211ENST00000569653 SLC13A2Q13183 592 aa12.87□□□□□ -0.35
GTF3C1-211ENST00000569653 CHIT1Q13231 466 aa12.87□□□□□ -0.35
GTF3C1-211ENST00000569653 CDKL4Q5MAI5 379 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms