RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 ANKRD53Q8N9V6 530 aa10.93□□□□□ -0.66
GTF3C1-209ENST00000568569 RELL2Q8NC24 303 aaPredicted RBP10.93□□□□□ -0.66
GTF3C1-209ENST00000568569 RNASE6Q93091 150 aaKnown RBP10.93□□□□□ -0.66
GTF3C1-209ENST00000568569 NEIL2Q969S2 332 aa10.93□□□□□ -0.66
GTF3C1-209ENST00000568569 SMIM10Q96HG1 83 aa10.93□□□□□ -0.66
GTF3C1-209ENST00000568569 SCYL1Q96KG9 808 aa10.93□□□□□ -0.66
GTF3C1-209ENST00000568569 SGCZQ96LD1 299 aa10.93□□□□□ -0.66
GTF3C1-209ENST00000568569 CNPPD1Q9BV87 410 aa10.93□□□□□ -0.66
GTF3C1-209ENST00000568569 EXO5Q9H790 373 aa10.93□□□□□ -0.66
GTF3C1-209ENST00000568569 PRTFDC1Q9NRG1 225 aa10.93□□□□□ -0.66
GTF3C1-209ENST00000568569 SACM1LQ9NTJ5 587 aa10.93□□□□□ -0.66
GTF3C1-209ENST00000568569 ARL15Q9NXU5 204 aa10.93□□□□□ -0.66
GTF3C1-209ENST00000568569 TAS2R13Q9NYV9 303 aa10.93□□□□□ -0.66
GTF3C1-209ENST00000568569 FBXO5Q9UKT4 447 aa10.93□□□□□ -0.66
GTF3C1-209ENST00000568569 ZKSCAN5Q9Y2L8 839 aa10.93□□□□□ -0.66
GTF3C1-209ENST00000568569 TRGV5A0A0B4J1U4 118 aa10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 CTAGE15A4D2H0 777 aa10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 FAM171A2A8MVW0 826 aa10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 WWP2O00308 870 aa10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 DVL2O14641 736 aa10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 HAUS5O94927 633 aa10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 HEXAP06865 529 aa10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 SERPINA6P08185 405 aa10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 CELA3AP09093 270 aa10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 PTMSP20962 102 aa10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 TACR1P25103 407 aa10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 MAGEA6P43360 314 aa10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 TERF1P54274 439 aa10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 STXBP1P61764 594 aaKnown RBP10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 FOXO1Q12778 655 aa10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 BMPR2Q13873 1038 aa10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 ELAVL1Q15717 326 aaKnown RBP10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 ZNF750Q32MQ0 723 aa10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 FBXL19-AS1Q494R0 122 aa10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 TMEM198Q66K66 360 aa10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 HSDL2Q6YN16 418 aa10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 CTAGE6Q86UF2 777 aa10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 CAND1Q86VP6 1230 aaKnown RBP10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 TMEM132CQ8N3T6 1108 aa10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 FBXW8Q8N3Y1 598 aa10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 ATL1Q8WXF7 558 aa10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 DAZLQ92904 295 aaKnown RBP10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 ARSGQ96EG1 525 aa10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 LINGO1Q96FE5 620 aa10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 TSNARE1Q96NA8 513 aa10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 NDNQ99608 321 aa10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 SH3GL2Q99962 352 aa10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 AIF1LQ9BQI0 150 aa10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 TRIM54Q9BYV2 358 aa10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 KLHL31Q9H511 634 aa10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 NEUROD4Q9HD90 331 aa10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 C20orf96Q9NUD7 363 aaPredicted RBP10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 SPRR3Q9UBC9 169 aa10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 MTRF1LQ9UGC7 380 aaKnown RBP10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 FOXD3Q9UJU5 478 aaPredicted RBP10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 MRPS33Q9Y291 106 aaKnown RBP10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 PCDHGB3Q9Y5G1 929 aa10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 CLDN16Q9Y5I7 305 aa10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 MAD1L1Q9Y6D9 718 aa10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 CLCA3PQ9Y6N3 262 aa10.92□□□□□ -0.66
GTF3C1-209ENST00000568569 TUBAL3A6NHL2 446 aa10.91□□□□□ -0.66
GTF3C1-209ENST00000568569 SDR42E2A6NKP2 422 aa10.91□□□□□ -0.66
GTF3C1-209ENST00000568569 C4orf51C9J302 202 aa10.91□□□□□ -0.66
GTF3C1-209ENST00000568569 TGFBR3LH3BV60 316 aa10.91□□□□□ -0.66
GTF3C1-209ENST00000568569 NRDCO43847 1150 aa10.91□□□□□ -0.66
GTF3C1-209ENST00000568569 P04436 131 aa10.91□□□□□ -0.66
GTF3C1-209ENST00000568569 MLNP12872 115 aa10.91□□□□□ -0.66
GTF3C1-209ENST00000568569 ENDOUP21128 410 aaKnown RBP10.91□□□□□ -0.66
GTF3C1-209ENST00000568569 BMP5P22003 454 aa10.91□□□□□ -0.66
GTF3C1-209ENST00000568569 DNASE1L1P49184 302 aa10.91□□□□□ -0.66
GTF3C1-209ENST00000568569 HK2P52789 917 aa10.91□□□□□ -0.66
GTF3C1-209ENST00000568569 RAB38P57729 211 aa10.91□□□□□ -0.66
GTF3C1-209ENST00000568569 BTN3A2P78410 334 aa10.91□□□□□ -0.66
GTF3C1-209ENST00000568569 CCZ1BP86790 482 aa10.91□□□□□ -0.66
GTF3C1-209ENST00000568569 CCZ1P86791 482 aaPredicted RBP10.91□□□□□ -0.66
GTF3C1-209ENST00000568569 TIAL1Q01085 375 aaKnown RBP eCLIP10.91□□□□□ -0.66
GTF3C1-209ENST00000568569 RBBP5Q15291 538 aaKnown RBP10.91□□□□□ -0.66
GTF3C1-209ENST00000568569 TOR1AIP1Q5JTV8 583 aa10.91□□□□□ -0.66
GTF3C1-209ENST00000568569 PAQR3Q6TCH7 311 aa10.91□□□□□ -0.66
GTF3C1-209ENST00000568569 OPN5Q6U736 354 aa10.91□□□□□ -0.66
GTF3C1-209ENST00000568569 TMPRSS11BQ86T26 416 aa10.91□□□□□ -0.66
GTF3C1-209ENST00000568569 ZNF595Q8IYB9 648 aa10.91□□□□□ -0.66
GTF3C1-209ENST00000568569 RNF10Q8N5U6 811 aaKnown RBP10.91□□□□□ -0.66
GTF3C1-209ENST00000568569 GAL3ST3Q96A11 431 aa10.91□□□□□ -0.66
GTF3C1-209ENST00000568569 FBXL8Q96CD0 374 aa10.91□□□□□ -0.66
GTF3C1-209ENST00000568569 FAR2Q96K12 515 aa10.91□□□□□ -0.66
GTF3C1-209ENST00000568569 FAM167BQ9BTA0 163 aa10.91□□□□□ -0.66
GTF3C1-209ENST00000568569 NPLQ9BXD5 320 aaPredicted RBP10.91□□□□□ -0.66
GTF3C1-209ENST00000568569 PELI2Q9HAT8 420 aa10.91□□□□□ -0.66
GTF3C1-209ENST00000568569 TUBA8Q9NY65 449 aaPredicted RBP10.91□□□□□ -0.66
GTF3C1-209ENST00000568569 DYRK1BQ9Y463 629 aa10.91□□□□□ -0.66
GTF3C1-209ENST00000568569 ATG4BQ9Y4P1 393 aa10.91□□□□□ -0.66
GTF3C1-209ENST00000568569 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 A0A088AWK7 358 aa10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 GOSR1O95249 250 aa10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 IFNA16P05015 189 aa10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 CCL3P10147 92 aa10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 EPXP11678 715 aa10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 ZNF10P21506 573 aaPredicted RBP10.9□□□□□ -0.66
GTF3C1-209ENST00000568569 SAT1P21673 171 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms