RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 CCDC80Q76M96 950 aa17.26■□□□□ 0.35
SMPD3-211ENST00000568373 CYP4Z1Q86W10 505 aa17.26■□□□□ 0.35
SMPD3-211ENST00000568373 FBXL6Q8N531 539 aa17.26■□□□□ 0.35
SMPD3-211ENST00000568373 BMFQ96LC9 184 aa17.26■□□□□ 0.35
SMPD3-211ENST00000568373 WDR92Q96MX6 357 aa17.26■□□□□ 0.35
SMPD3-211ENST00000568373 TEFMQ96QE5 360 aaKnown RBP17.26■□□□□ 0.35
SMPD3-211ENST00000568373 AICDAQ9GZX7 198 aa17.26■□□□□ 0.35
SMPD3-211ENST00000568373 REEP1Q9H902 201 aa17.26■□□□□ 0.35
SMPD3-211ENST00000568373 NEUROD4Q9HD90 331 aa17.26■□□□□ 0.35
SMPD3-211ENST00000568373 TEX10Q9NXF1 929 aaPredicted RBP17.26■□□□□ 0.35
SMPD3-211ENST00000568373 SPHK1Q9NYA1 384 aa17.26■□□□□ 0.35
SMPD3-211ENST00000568373 CD207Q9UJ71 328 aa17.26■□□□□ 0.35
SMPD3-211ENST00000568373 PCDHGA8Q9Y5G5 932 aa17.26■□□□□ 0.35
SMPD3-211ENST00000568373 A0A0A6YYD5 115 aa17.25■□□□□ 0.35
SMPD3-211ENST00000568373 SLC16A6O15403 523 aa17.25■□□□□ 0.35
SMPD3-211ENST00000568373 EML2O95834 649 aa17.25■□□□□ 0.35
SMPD3-211ENST00000568373 CDH2P19022 906 aaPredicted RBP17.25■□□□□ 0.35
SMPD3-211ENST00000568373 GSTM2P28161 218 aa17.25■□□□□ 0.35
SMPD3-211ENST00000568373 FRKP42685 505 aaPredicted RBP17.25■□□□□ 0.35
SMPD3-211ENST00000568373 SSR2P43308 183 aa17.25■□□□□ 0.35
SMPD3-211ENST00000568373 YAP1P46937 504 aaKnown RBP17.25■□□□□ 0.35
SMPD3-211ENST00000568373 MANFP55145 182 aaKnown RBP17.25■□□□□ 0.35
SMPD3-211ENST00000568373 PCBP4P57723 403 aaKnown RBP17.25■□□□□ 0.35
SMPD3-211ENST00000568373 TRA2BP62995 288 aaKnown RBP17.25■□□□□ 0.35
SMPD3-211ENST00000568373 ZIC1Q15915 447 aa17.25■□□□□ 0.35
SMPD3-211ENST00000568373 TPRG1LQ5T0D9 272 aa17.25■□□□□ 0.35
SMPD3-211ENST00000568373 WASH2PQ6VEQ5 465 aa17.25■□□□□ 0.35
SMPD3-211ENST00000568373 AMER3Q8N944 861 aa17.25■□□□□ 0.35
SMPD3-211ENST00000568373 DNASE1L2Q92874 299 aa17.25■□□□□ 0.35
SMPD3-211ENST00000568373 C17orf62Q9BQA9 187 aa17.25■□□□□ 0.35
SMPD3-211ENST00000568373 DPH7Q9BTV6 452 aa17.25■□□□□ 0.35
SMPD3-211ENST00000568373 TTYH1Q9H313 450 aaPredicted RBP17.25■□□□□ 0.35
SMPD3-211ENST00000568373 KCNK12Q9HB15 430 aa17.25■□□□□ 0.35
SMPD3-211ENST00000568373 C5AR2Q9P296 337 aa17.25■□□□□ 0.35
SMPD3-211ENST00000568373 A0A0G2JN53 185 aa17.25■□□□□ 0.35
SMPD3-211ENST00000568373 C2CD4DB7Z1M9 353 aa17.25■□□□□ 0.35
SMPD3-211ENST00000568373 HAT1O14929 419 aa17.25■□□□□ 0.35
SMPD3-211ENST00000568373 PPM1DO15297 605 aa17.25■□□□□ 0.35
SMPD3-211ENST00000568373 APBB3O95704 486 aa17.25■□□□□ 0.35
SMPD3-211ENST00000568373 OPN1SWP03999 348 aa17.25■□□□□ 0.35
SMPD3-211ENST00000568373 ARAFP10398 606 aa17.25■□□□□ 0.35
SMPD3-211ENST00000568373 ITGAMP11215 1152 aa17.25■□□□□ 0.35
SMPD3-211ENST00000568373 AK4P27144 223 aaPredicted RBP17.25■□□□□ 0.35
SMPD3-211ENST00000568373 HTR1BP28222 390 aa17.25■□□□□ 0.35
SMPD3-211ENST00000568373 TPD52P55327 224 aaPredicted RBP17.25■□□□□ 0.35
SMPD3-211ENST00000568373 LRRC32Q14392 662 aa17.25■□□□□ 0.35
SMPD3-211ENST00000568373 KDM4DQ6B0I6 523 aa17.25■□□□□ 0.35
SMPD3-211ENST00000568373 SLC44A3Q8N4M1 653 aa17.25■□□□□ 0.35
SMPD3-211ENST00000568373 TMEM145Q8NBT3 493 aa17.25■□□□□ 0.35
SMPD3-211ENST00000568373 PIK3C3Q8NEB9 887 aa17.25■□□□□ 0.35
SMPD3-211ENST00000568373 TAMM41Q96BW9 452 aa17.25■□□□□ 0.35
SMPD3-211ENST00000568373 NEURL3Q96EH8 262 aa17.25■□□□□ 0.35
SMPD3-211ENST00000568373 SARGQ9BW04 601 aa17.25■□□□□ 0.35
SMPD3-211ENST00000568373 DDX18Q9NVP1 670 aaKnown RBP17.25■□□□□ 0.35
SMPD3-211ENST00000568373 PTTG2Q9NZH5 202 aa17.25■□□□□ 0.35
SMPD3-211ENST00000568373 OR6C2Q9NZP2 312 aa17.25■□□□□ 0.35
SMPD3-211ENST00000568373 MTCH2Q9Y6C9 303 aa17.25■□□□□ 0.35
SMPD3-211ENST00000568373 TCRBV21S2A2A0A5A6 115 aa17.24■□□□□ 0.35
SMPD3-211ENST00000568373 LRRC72A6NJI9 287 aa17.24■□□□□ 0.35
SMPD3-211ENST00000568373 HOXB3P14651 431 aaPredicted RBP17.24■□□□□ 0.35
SMPD3-211ENST00000568373 NDUFS1P28331 727 aa17.24■□□□□ 0.35
SMPD3-211ENST00000568373 CMPK1P30085 196 aa17.24■□□□□ 0.35
SMPD3-211ENST00000568373 AHRP35869 848 aa17.24■□□□□ 0.35
SMPD3-211ENST00000568373 RXRGP48443 463 aa17.24■□□□□ 0.35
SMPD3-211ENST00000568373 DAPP51397 102 aa17.24■□□□□ 0.35
SMPD3-211ENST00000568373 ESRRGP62508 458 aa17.24■□□□□ 0.35
SMPD3-211ENST00000568373 TCEA2Q15560 299 aa17.24■□□□□ 0.35
SMPD3-211ENST00000568373 ADPRMQ3LIE5 342 aa17.24■□□□□ 0.35
SMPD3-211ENST00000568373 SAXO2Q658L1 398 aa17.24■□□□□ 0.35
SMPD3-211ENST00000568373 ZNF793Q6ZN11 406 aa17.24■□□□□ 0.35
SMPD3-211ENST00000568373 RD3Q7Z3Z2 195 aa17.24■□□□□ 0.35
SMPD3-211ENST00000568373 AMIGO1Q86WK6 493 aa17.24■□□□□ 0.35
SMPD3-211ENST00000568373 ZC3H7AQ8IWR0 971 aaKnown RBP17.24■□□□□ 0.35
SMPD3-211ENST00000568373 SPPL2AQ8TCT8 520 aa17.24■□□□□ 0.35
SMPD3-211ENST00000568373 TSACCQ96A04 125 aaPredicted RBP17.24■□□□□ 0.35
SMPD3-211ENST00000568373 EXOSC8Q96B26 276 aaKnown RBP17.24■□□□□ 0.35
SMPD3-211ENST00000568373 ZBED6CLQ96FA7 236 aaPredicted RBP17.24■□□□□ 0.35
SMPD3-211ENST00000568373 THUMPD1Q9NXG2 353 aaKnown RBP17.24■□□□□ 0.35
SMPD3-211ENST00000568373 PDP1Q9P0J1 537 aaPredicted RBP17.24■□□□□ 0.35
SMPD3-211ENST00000568373 PCOLCE2Q9UKZ9 415 aa17.24■□□□□ 0.35
SMPD3-211ENST00000568373 DGKBQ9Y6T7 804 aa17.24■□□□□ 0.35
SMPD3-211ENST00000568373 COL6A3P12111 3177 aa17.24■□□□□ 0.35
SMPD3-211ENST00000568373 MITFO75030 526 aaPredicted RBP17.24■□□□□ 0.35
SMPD3-211ENST00000568373 POLR2IP36954 125 aaKnown RBP17.24■□□□□ 0.35
SMPD3-211ENST00000568373 PCBP3P57721 371 aaKnown RBP17.24■□□□□ 0.35
SMPD3-211ENST00000568373 DSTNP60981 165 aa17.24■□□□□ 0.35
SMPD3-211ENST00000568373 HYAL2Q12891 473 aa17.24■□□□□ 0.35
SMPD3-211ENST00000568373 IL18R1Q13478 541 aa17.24■□□□□ 0.35
SMPD3-211ENST00000568373 CRB2Q5IJ48 1285 aa17.24■□□□□ 0.35
SMPD3-211ENST00000568373 TMEM31Q5JXX7 168 aa17.24■□□□□ 0.35
SMPD3-211ENST00000568373 RBM48Q5RL73 367 aaKnown RBP17.24■□□□□ 0.35
SMPD3-211ENST00000568373 ZNF691Q5VV52 312 aa17.24■□□□□ 0.35
SMPD3-211ENST00000568373 B3GNT6Q6ZMB0 384 aa17.24■□□□□ 0.35
SMPD3-211ENST00000568373 GALNT5Q7Z7M9 940 aa17.24■□□□□ 0.35
SMPD3-211ENST00000568373 SLC30A8Q8IWU4 369 aa17.24■□□□□ 0.35
SMPD3-211ENST00000568373 TBC1D19Q8N5T2 526 aa17.24■□□□□ 0.35
SMPD3-211ENST00000568373 LCN9Q8WX39 176 aa17.24■□□□□ 0.35
SMPD3-211ENST00000568373 JPH3Q8WXH2 748 aaPredicted RBP17.24■□□□□ 0.35
SMPD3-211ENST00000568373 LZICQ8WZA0 190 aa17.24■□□□□ 0.35
SMPD3-211ENST00000568373 HDAC2Q92769 488 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms