RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 PIK3CBP42338 1070 aa16.03■□□□□ 0.16
CMTM3-213ENST00000566756 PCBP3P57721 371 aaKnown RBP16.03■□□□□ 0.16
CMTM3-213ENST00000566756 SPIBQ01892 262 aa16.03■□□□□ 0.16
CMTM3-213ENST00000566756 ZNF45Q02386 682 aa16.03■□□□□ 0.16
CMTM3-213ENST00000566756 RUNX3Q13761 415 aa16.03■□□□□ 0.16
CMTM3-213ENST00000566756 CCSMST1Q4G0I0 132 aa16.03■□□□□ 0.16
CMTM3-213ENST00000566756 BCL7AQ4VC05 210 aa16.03■□□□□ 0.16
CMTM3-213ENST00000566756 IKBIPQ70UQ0 350 aa16.03■□□□□ 0.16
CMTM3-213ENST00000566756 CADM3Q8N126 398 aa16.03■□□□□ 0.16
CMTM3-213ENST00000566756 LGI4Q8N135 537 aa16.03■□□□□ 0.16
CMTM3-213ENST00000566756 ELSPBP1Q96BH3 223 aa16.03■□□□□ 0.16
CMTM3-213ENST00000566756 MAPKAP1Q9BPZ7 522 aa16.03■□□□□ 0.16
CMTM3-213ENST00000566756 ZNF556Q9HAH1 456 aa16.03■□□□□ 0.16
CMTM3-213ENST00000566756 DMRT3Q9NQL9 472 aa16.03■□□□□ 0.16
CMTM3-213ENST00000566756 TMEM184CQ9NVA4 438 aa16.03■□□□□ 0.16
CMTM3-213ENST00000566756 ZNF226Q9NYT6 803 aa16.03■□□□□ 0.16
CMTM3-213ENST00000566756 CLEC1BQ9P126 229 aa16.03■□□□□ 0.16
CMTM3-213ENST00000566756 RAPGEFL1Q9UHV5 662 aa16.03■□□□□ 0.16
CMTM3-213ENST00000566756 DYRK1BQ9Y463 629 aa16.03■□□□□ 0.16
CMTM3-213ENST00000566756 TCF20Q9UGU0 1960 aaKnown RBP16.03■□□□□ 0.16
CMTM3-213ENST00000566756 AQP9O43315 295 aa16.02■□□□□ 0.16
CMTM3-213ENST00000566756 C1GALT1C1LP0DN25 315 aa16.02■□□□□ 0.16
CMTM3-213ENST00000566756 ETFAP13804 333 aa16.02■□□□□ 0.16
CMTM3-213ENST00000566756 AQP1P29972 269 aa16.02■□□□□ 0.16
CMTM3-213ENST00000566756 SLC19A1P41440 591 aa16.02■□□□□ 0.16
CMTM3-213ENST00000566756 XCR1P46094 333 aa16.02■□□□□ 0.16
CMTM3-213ENST00000566756 PREPP48147 710 aa16.02■□□□□ 0.16
CMTM3-213ENST00000566756 HIST2H2AA3Q6FI13 130 aa16.02■□□□□ 0.16
CMTM3-213ENST00000566756 FAM71E1Q6IPT2 247 aa16.02■□□□□ 0.16
CMTM3-213ENST00000566756 COMMD6Q7Z4G1 85 aa16.02■□□□□ 0.16
CMTM3-213ENST00000566756 TMPRSS11BQ86T26 416 aa16.02■□□□□ 0.16
CMTM3-213ENST00000566756 CCDC103Q8IW40 242 aa16.02■□□□□ 0.16
CMTM3-213ENST00000566756 ZNF675Q8TD23 568 aa16.02■□□□□ 0.16
CMTM3-213ENST00000566756 ZNF480Q8WV37 535 aa16.02■□□□□ 0.16
CMTM3-213ENST00000566756 NXPE3Q969Y0 559 aa16.02■□□□□ 0.16
CMTM3-213ENST00000566756 PPCDCQ96CD2 204 aa16.02■□□□□ 0.16
CMTM3-213ENST00000566756 MYADMQ96S97 322 aa16.02■□□□□ 0.16
CMTM3-213ENST00000566756 PIP5K1AQ99755 562 aa16.02■□□□□ 0.16
CMTM3-213ENST00000566756 ITM2CQ9NQX7 267 aa16.02■□□□□ 0.16
CMTM3-213ENST00000566756 CNOT2Q9NZN8 540 aaKnown RBP16.02■□□□□ 0.16
CMTM3-213ENST00000566756 HCN4Q9Y3Q4 1203 aa16.02■□□□□ 0.16
CMTM3-213ENST00000566756 PCDHGA3Q9Y5H0 932 aa16.02■□□□□ 0.16
CMTM3-213ENST00000566756 AGAP5A6NIR3 686 aa16.02■□□□□ 0.15
CMTM3-213ENST00000566756 H3BM21 787 aa16.02■□□□□ 0.15
CMTM3-213ENST00000566756 ARAFP10398 606 aa16.02■□□□□ 0.15
CMTM3-213ENST00000566756 NPPBP16860 134 aa16.02■□□□□ 0.15
CMTM3-213ENST00000566756 XPAP23025 273 aaPredicted RBP16.02■□□□□ 0.15
CMTM3-213ENST00000566756 C21orf33P30042 268 aaPredicted RBP16.02■□□□□ 0.15
CMTM3-213ENST00000566756 MMP12P39900 470 aa16.02■□□□□ 0.15
CMTM3-213ENST00000566756 PRIM2P49643 509 aa16.02■□□□□ 0.15
CMTM3-213ENST00000566756 TBPL1P62380 186 aa16.02■□□□□ 0.15
CMTM3-213ENST00000566756 CDK6Q00534 326 aa16.02■□□□□ 0.15
CMTM3-213ENST00000566756 PRKCDQ05655 676 aa16.02■□□□□ 0.15
CMTM3-213ENST00000566756 MESP2Q0VG99 397 aa16.02■□□□□ 0.15
CMTM3-213ENST00000566756 SYT16Q17RD7 645 aa16.02■□□□□ 0.15
CMTM3-213ENST00000566756 HNRNPA1L2Q32P51 320 aaKnown RBP16.02■□□□□ 0.15
CMTM3-213ENST00000566756 COX20Q5RI15 118 aa16.02■□□□□ 0.15
CMTM3-213ENST00000566756 ADNP2Q6IQ32 1131 aa16.02■□□□□ 0.15
CMTM3-213ENST00000566756 ZNF367Q7RTV3 350 aa16.02■□□□□ 0.15
CMTM3-213ENST00000566756 METTL4Q8N3J2 472 aa16.02■□□□□ 0.15
CMTM3-213ENST00000566756 GPR156Q8NFN8 814 aa16.02■□□□□ 0.15
CMTM3-213ENST00000566756 UBE2E3Q969T4 207 aa16.02■□□□□ 0.15
CMTM3-213ENST00000566756 PPP1R16AQ96I34 528 aa16.02■□□□□ 0.15
CMTM3-213ENST00000566756 CDCA4Q9BXL8 241 aa16.02■□□□□ 0.15
CMTM3-213ENST00000566756 INIPQ9NRY2 104 aa16.02■□□□□ 0.15
CMTM3-213ENST00000566756 TAS2R9Q9NYW1 312 aa16.02■□□□□ 0.15
CMTM3-213ENST00000566756 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.02■□□□□ 0.15
CMTM3-213ENST00000566756 ANGPT4Q9Y264 503 aa16.02■□□□□ 0.15
CMTM3-213ENST00000566756 LAMA3Q16787 3333 aa16.02■□□□□ 0.15
CMTM3-213ENST00000566756 MN1Q10571 1320 aaPredicted RBP16.01■□□□□ 0.15
CMTM3-213ENST00000566756 NUP214P35658 2090 aaPredicted RBP16.01■□□□□ 0.15
CMTM3-213ENST00000566756 CDH23Q9H251 3354 aa16.01■□□□□ 0.15
CMTM3-213ENST00000566756 EFCAB10A6NFE3 127 aa16.01■□□□□ 0.15
CMTM3-213ENST00000566756 C6orf47O95873 294 aa16.01■□□□□ 0.15
CMTM3-213ENST00000566756 ADORA3P0DMS8 318 aa16.01■□□□□ 0.15
CMTM3-213ENST00000566756 LAMP2P13473 410 aa16.01■□□□□ 0.15
CMTM3-213ENST00000566756 RHCEP18577 417 aa16.01■□□□□ 0.15
CMTM3-213ENST00000566756 GADD45AP24522 165 aa16.01■□□□□ 0.15
CMTM3-213ENST00000566756 OPRD1P41143 372 aa16.01■□□□□ 0.15
CMTM3-213ENST00000566756 ALDH9A1P49189 494 aa16.01■□□□□ 0.15
CMTM3-213ENST00000566756 CDH12P55289 794 aa16.01■□□□□ 0.15
CMTM3-213ENST00000566756 EXOC3L2Q2M3D2 409 aa16.01■□□□□ 0.15
CMTM3-213ENST00000566756 INAVAQ3KP66 663 aa16.01■□□□□ 0.15
CMTM3-213ENST00000566756 CATSPEREQ5SY80 951 aa16.01■□□□□ 0.15
CMTM3-213ENST00000566756 ZNF648Q5T619 568 aaPredicted RBP16.01■□□□□ 0.15
CMTM3-213ENST00000566756 TMEM220Q6QAJ8 160 aa16.01■□□□□ 0.15
CMTM3-213ENST00000566756 LIPIQ6XZB0 460 aa16.01■□□□□ 0.15
CMTM3-213ENST00000566756 FAM92BQ6ZTR7 304 aa16.01■□□□□ 0.15
CMTM3-213ENST00000566756 ARMCX6Q7L4S7 300 aa16.01■□□□□ 0.15
CMTM3-213ENST00000566756 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.01■□□□□ 0.15
CMTM3-213ENST00000566756 YAF2Q8IY57 180 aa16.01■□□□□ 0.15
CMTM3-213ENST00000566756 NATD1Q8N6N6 113 aa16.01■□□□□ 0.15
CMTM3-213ENST00000566756 NFKBIDQ8NI38 313 aa16.01■□□□□ 0.15
CMTM3-213ENST00000566756 PSMA8Q8TAA3 256 aa16.01■□□□□ 0.15
CMTM3-213ENST00000566756 C16orf78Q8WTQ4 265 aa16.01■□□□□ 0.15
CMTM3-213ENST00000566756 PROX1Q92786 737 aa16.01■□□□□ 0.15
CMTM3-213ENST00000566756 PLA2G2FQ9BZM2 168 aa16.01■□□□□ 0.15
CMTM3-213ENST00000566756 ZBTB20Q9HC78 741 aaPredicted RBP16.01■□□□□ 0.15
CMTM3-213ENST00000566756 ICKQ9UPZ9 632 aa16.01■□□□□ 0.15
CMTM3-213ENST00000566756 ENPP4Q9Y6X5 453 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms