RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 PCDH7O60245 1069 aa10.84□□□□□ -0.67
KARS-207ENST00000566560 EEDO75530 441 aaKnown RBP10.84□□□□□ -0.67
KARS-207ENST00000566560 ONECUT2O95948 504 aa10.84□□□□□ -0.67
KARS-207ENST00000566560 GBAP04062 536 aa10.84□□□□□ -0.67
KARS-207ENST00000566560 TCN2P20062 427 aa10.84□□□□□ -0.67
KARS-207ENST00000566560 PRPH2P23942 346 aa10.84□□□□□ -0.67
KARS-207ENST00000566560 TIA1P31483 386 aaKnown RBP eCLIP10.84□□□□□ -0.67
KARS-207ENST00000566560 DLSTP36957 453 aa10.84□□□□□ -0.67
KARS-207ENST00000566560 XCR1P46094 333 aa10.84□□□□□ -0.67
KARS-207ENST00000566560 RPL38P63173 70 aaKnown RBP10.84□□□□□ -0.67
KARS-207ENST00000566560 OCA2Q04671 838 aa10.84□□□□□ -0.67
KARS-207ENST00000566560 GALNTL6Q49A17 601 aa10.84□□□□□ -0.67
KARS-207ENST00000566560 ATP6AP1LQ52LC2 224 aa10.84□□□□□ -0.67
KARS-207ENST00000566560 MLIPQ5VWP3 458 aa10.84□□□□□ -0.67
KARS-207ENST00000566560 CYP20A1Q6UW02 462 aa10.84□□□□□ -0.67
KARS-207ENST00000566560 VASH2Q86V25 355 aa10.84□□□□□ -0.67
KARS-207ENST00000566560 ZC3H7AQ8IWR0 971 aaKnown RBP10.84□□□□□ -0.67
KARS-207ENST00000566560 CA13Q8N1Q1 262 aa10.84□□□□□ -0.67
KARS-207ENST00000566560 ZCCHC7Q8N3Z6 543 aaKnown RBP10.84□□□□□ -0.67
KARS-207ENST00000566560 ENDOVQ8N8Q3 282 aaKnown RBP10.84□□□□□ -0.67
KARS-207ENST00000566560 OR51Q1Q8NH59 317 aa10.84□□□□□ -0.67
KARS-207ENST00000566560 ADAMTS18Q8TE60 1221 aa10.84□□□□□ -0.67
KARS-207ENST00000566560 ZCCHC14Q8WYQ9 949 aaKnown RBP10.84□□□□□ -0.67
KARS-207ENST00000566560 TUBGCP3Q96CW5 907 aa10.84□□□□□ -0.67
KARS-207ENST00000566560 APIPQ96GX9 242 aa10.84□□□□□ -0.67
KARS-207ENST00000566560 PEX11GQ96HA9 241 aa10.84□□□□□ -0.67
KARS-207ENST00000566560 PPP3R2Q96LZ3 170 aa10.84□□□□□ -0.67
KARS-207ENST00000566560 NPLQ9BXD5 320 aaPredicted RBP10.84□□□□□ -0.67
KARS-207ENST00000566560 EBPLQ9BY08 206 aa10.84□□□□□ -0.67
KARS-207ENST00000566560 CCDC134Q9H6E4 229 aa10.84□□□□□ -0.67
KARS-207ENST00000566560 DDX31Q9H8H2 851 aaKnown RBP10.84□□□□□ -0.67
KARS-207ENST00000566560 GPN2Q9H9Y4 310 aaPredicted RBP10.84□□□□□ -0.67
KARS-207ENST00000566560 MKKSQ9NPJ1 570 aaPredicted RBP10.84□□□□□ -0.67
KARS-207ENST00000566560 C14orf105Q9NVL8 296 aa10.84□□□□□ -0.67
KARS-207ENST00000566560 C1orf109Q9NX04 203 aa10.84□□□□□ -0.67
KARS-207ENST00000566560 LYARQ9NX58 379 aaKnown RBP10.84□□□□□ -0.67
KARS-207ENST00000566560 ZNF282Q9UDV7 671 aaPredicted RBP10.84□□□□□ -0.67
KARS-207ENST00000566560 VTI1BQ9UEU0 232 aa10.84□□□□□ -0.67
KARS-207ENST00000566560 ADAM29Q9UKF5 820 aa10.84□□□□□ -0.67
KARS-207ENST00000566560 NXT1Q9UKK6 140 aaKnown RBP10.84□□□□□ -0.67
KARS-207ENST00000566560 CCL27Q9Y4X3 112 aa10.84□□□□□ -0.67
KARS-207ENST00000566560 POLR3HQ9Y535 204 aaPredicted RBP10.84□□□□□ -0.67
KARS-207ENST00000566560 SPACA6W5XKT8 324 aa10.84□□□□□ -0.67
KARS-207ENST00000566560 SCN2AQ99250 2005 aa10.84□□□□□ -0.67
KARS-207ENST00000566560 IGLV3-12A0A075B6K2 115 aa10.83□□□□□ -0.68
KARS-207ENST00000566560 LOC101059948A0A1B0GTJ6 334 aa10.83□□□□□ -0.68
KARS-207ENST00000566560 ATP6AP2A0A1C7CYW4 349 aa10.83□□□□□ -0.68
KARS-207ENST00000566560 GNG14A0A1W2PPG7 69 aa10.83□□□□□ -0.68
KARS-207ENST00000566560 TRPC5OSA6NMA1 111 aa10.83□□□□□ -0.68
KARS-207ENST00000566560 NPIPB8E9PQR5 432 aa10.83□□□□□ -0.68
KARS-207ENST00000566560 LSM1O15116 133 aaKnown RBP10.83□□□□□ -0.68
KARS-207ENST00000566560 TMPRSS11DO60235 418 aa10.83□□□□□ -0.68
KARS-207ENST00000566560 EDF1O60869 148 aaKnown RBP10.83□□□□□ -0.68
KARS-207ENST00000566560 ATP6AP2O75787 350 aa10.83□□□□□ -0.68
KARS-207ENST00000566560 MYO1DO94832 1006 aa10.83□□□□□ -0.68
KARS-207ENST00000566560 ALBP02768 609 aa10.83□□□□□ -0.68
KARS-207ENST00000566560 KLK1P06870 262 aa10.83□□□□□ -0.68
KARS-207ENST00000566560 RAB40ALP0C0E4 278 aa10.83□□□□□ -0.68
KARS-207ENST00000566560 RNH1P13489 461 aaKnown RBP10.83□□□□□ -0.68
KARS-207ENST00000566560 TPP2P29144 1249 aaPredicted RBP10.83□□□□□ -0.68
KARS-207ENST00000566560 MAPK12P53778 367 aa10.83□□□□□ -0.68
KARS-207ENST00000566560 LIM2P55344 173 aa10.83□□□□□ -0.68
KARS-207ENST00000566560 HNRNPH2P55795 449 aaKnown RBP10.83□□□□□ -0.68
KARS-207ENST00000566560 RAB38P57729 211 aa10.83□□□□□ -0.68
KARS-207ENST00000566560 RUNX2Q13950 521 aa10.83□□□□□ -0.68
KARS-207ENST00000566560 OXLD1Q5BKU9 147 aa10.83□□□□□ -0.68
KARS-207ENST00000566560 CCNYL2Q5T2Q4 361 aa10.83□□□□□ -0.68
KARS-207ENST00000566560 MFSD4BQ5TF39 518 aa10.83□□□□□ -0.68
KARS-207ENST00000566560 MRPL14Q6P1L8 145 aaKnown RBP10.83□□□□□ -0.68
KARS-207ENST00000566560 Q6ZSR9 355 aa10.83□□□□□ -0.68
KARS-207ENST00000566560 OVCH1Q7RTY7 1134 aa10.83□□□□□ -0.68
KARS-207ENST00000566560 MAVSQ7Z434 540 aa10.83□□□□□ -0.68
KARS-207ENST00000566560 WDR75Q8IWA0 830 aaKnown RBP10.83□□□□□ -0.68
KARS-207ENST00000566560 PRSS58Q8IYP2 241 aa10.83□□□□□ -0.68
KARS-207ENST00000566560 FAM47BQ8NA70 645 aa10.83□□□□□ -0.68
KARS-207ENST00000566560 CHTF18Q8WVB6 975 aa10.83□□□□□ -0.68
KARS-207ENST00000566560 HPS1Q92902 700 aa10.83□□□□□ -0.68
KARS-207ENST00000566560 C3orf30Q96M34 536 aa10.83□□□□□ -0.68
KARS-207ENST00000566560 OR1F2PQ96R84 312 aa10.83□□□□□ -0.68
KARS-207ENST00000566560 CSF3RQ99062 836 aa10.83□□□□□ -0.68
KARS-207ENST00000566560 SLC26A1Q9H2B4 701 aa10.83□□□□□ -0.68
KARS-207ENST00000566560 WDR54Q9H977 334 aa10.83□□□□□ -0.68
KARS-207ENST00000566560 MEAF6Q9HAF1 191 aa10.83□□□□□ -0.68
KARS-207ENST00000566560 CLK4Q9HAZ1 481 aaKnown RBP10.83□□□□□ -0.68
KARS-207ENST00000566560 LYRM4Q9HD34 91 aa10.83□□□□□ -0.68
KARS-207ENST00000566560 FGFR1OP2Q9NVK5 253 aa10.83□□□□□ -0.68
KARS-207ENST00000566560 PGPEP1Q9NXJ5 209 aa10.83□□□□□ -0.68
KARS-207ENST00000566560 GIMAP2Q9UG22 337 aa10.83□□□□□ -0.68
KARS-207ENST00000566560 PHF11Q9UIL8 331 aa10.83□□□□□ -0.68
KARS-207ENST00000566560 MCM8Q9UJA3 840 aa10.83□□□□□ -0.68
KARS-207ENST00000566560 FBXW2Q9UKT8 454 aa10.83□□□□□ -0.68
KARS-207ENST00000566560 DAPP1Q9UN19 280 aa10.83□□□□□ -0.68
KARS-207ENST00000566560 USH1CQ9Y6N9 552 aa10.83□□□□□ -0.68
KARS-207ENST00000566560 TPRP12270 2363 aaKnown RBP10.82□□□□□ -0.68
KARS-207ENST00000566560 TMEM8BA6NDV4 472 aa10.82□□□□□ -0.68
KARS-207ENST00000566560 TERTO14746 1132 aaKnown RBP10.82□□□□□ -0.68
KARS-207ENST00000566560 POLR3GO15318 223 aaPredicted RBP10.82□□□□□ -0.68
KARS-207ENST00000566560 KLK10O43240 276 aa10.82□□□□□ -0.68
KARS-207ENST00000566560 CNOT3O75175 753 aaKnown RBP10.82□□□□□ -0.68
KARS-207ENST00000566560 DNAJB6O75190 326 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms