RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 SLC2A7Q6PXP3 512 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 RTL4Q6ZR62 310 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 SCAIQ8N9R8 606 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 SMYD1Q8NB12 490 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 OR51D1Q8NGF3 324 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 RPLP0P6Q8NHW5 317 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 LRTOMTQ8WZ04 291 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 GTPBP3Q969Y2 492 aaKnown RBP3.23□□□□□ -1.89
CHD9-213ENST00000564845 HS6ST2Q96MM7 605 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 VPS35Q96QK1 796 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 MAGEH1Q9H213 219 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 KCNH6Q9H252 994 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 MKL2Q9ULH7 1088 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 ERGIC3Q9Y282 383 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 CPED1A4D0V7 1026 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 A6NLC8 198 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 C9J4A7 227 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 PRSS44E7EML9 344 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 MAN2B1O00754 1011 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 MATN3O15232 486 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 PLIN3O60664 434 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 PAK4O96013 591 aaPredicted RBP3.23□□□□□ -1.89
CHD9-213ENST00000564845 OPN1SWP03999 348 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 POU2F1P14859 743 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 MAGP20916 626 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 LHCGRP22888 699 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 FEN1P39748 380 aaKnown RBP3.23□□□□□ -1.89
CHD9-213ENST00000564845 RRADP55042 308 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 ZNF846Q147U1 533 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 PAGE3Q5JUK9 113 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 WDR88Q6ZMY6 472 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 OAFQ86UD1 273 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 CCL4L1Q8NHW4 92 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 FGF14Q92915 247 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 TMEM246Q9BRR3 403 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 DPY30Q9C005 99 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 PATZ1Q9HBE1 687 aaKnown RBP3.23□□□□□ -1.89
CHD9-213ENST00000564845 GIN1Q9NXP7 522 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 KIAA1522Q9P206 1035 aaPredicted RBP3.23□□□□□ -1.89
CHD9-213ENST00000564845 ING4Q9UNL4 249 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 PCDHGA8Q9Y5G5 932 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 NOX1Q9Y5S8 564 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 SNX13Q9Y5W8 968 aa3.23□□□□□ -1.89
CHD9-213ENST00000564845 ANKRD28O15084 1053 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 BPGMP07738 259 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 SERPINA6P08185 405 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 C8orf89P0DMQ9 161 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 ACVR2AP27037 513 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 TGFBR1P36897 503 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 OR1E2P47887 323 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 NR1H2P55055 460 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 TPTEP56180 551 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 EEFSECP57772 596 aaKnown RBP3.22□□□□□ -1.89
CHD9-213ENST00000564845 SLC14A1Q13336 389 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 VASH1Q7L8A9 365 aaPredicted RBP3.22□□□□□ -1.89
CHD9-213ENST00000564845 SYTL1Q8IYJ3 562 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 HTRA1Q92743 480 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 TSSK3Q96PN8 268 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 LRRN3Q9H3W5 708 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 PLEKHA1Q9HB21 404 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 PRDM6Q9NQX0 595 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 PHPT1Q9NRX4 125 aaPredicted RBP3.22□□□□□ -1.89
CHD9-213ENST00000564845 LYARQ9NX58 379 aaKnown RBP3.22□□□□□ -1.89
CHD9-213ENST00000564845 OBP2AQ9NY56 170 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 FAM159BA6NKW6 160 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 ALG1L2C9J202 215 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 GHRHP01286 108 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 SFTPCP11686 197 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 ANXA3P12429 323 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 F8A1P23610 371 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 PRPH2P23942 346 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 BDKRB1P46663 353 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 NOVA1P51513 510 aaKnown RBP3.22□□□□□ -1.89
CHD9-213ENST00000564845 MLLT6P55198 1093 aaPredicted RBP3.22□□□□□ -1.89
CHD9-213ENST00000564845 GSCP56915 257 aaPredicted RBP3.22□□□□□ -1.89
CHD9-213ENST00000564845 CLDN2P57739 230 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 MANEAQ5SRI9 462 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 COL13A1Q5TAT6 717 aaPredicted RBP3.22□□□□□ -1.89
CHD9-213ENST00000564845 KCTD11Q693B1 232 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 GPR135Q8IZ08 494 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 KDM1BQ8NB78 822 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 KYQ8NBH2 561 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 RORBQ92753 470 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 CENPNQ96H22 339 aaPredicted RBP3.22□□□□□ -1.89
CHD9-213ENST00000564845 SEC61A2Q9H9S3 476 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 SERHLQ9NQF3 203 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 ELOVL2Q9NXB9 296 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 RNF150Q9ULK6 438 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 CELSR2Q9HCU4 2923 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 KLF11O14901 512 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 IDH3BO43837 385 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 KRT33AO76009 404 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 CTSBP07858 339 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 EIF2DP41214 584 aaKnown RBP3.22□□□□□ -1.89
CHD9-213ENST00000564845 CD151P48509 253 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 SRPXP78539 464 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 ABRAXAS2Q15018 415 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 SPDYE7PQ495Y7 208 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 IFI44LQ53G44 452 aa3.22□□□□□ -1.89
CHD9-213ENST00000564845 CTSL3PQ5NE16 218 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms