RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 KIF18AQ8NI77 898 aa23.64■■□□□ 1.37
AC009041.3-201ENST00000564390 ADAMTS18Q8TE60 1221 aa23.64■■□□□ 1.37
AC009041.3-201ENST00000564390 UBE2E3Q969T4 207 aa23.64■■□□□ 1.37
AC009041.3-201ENST00000564390 C5orf34Q96MH7 638 aa23.64■■□□□ 1.37
AC009041.3-201ENST00000564390 PLEKHB1Q9UF11 243 aaPredicted RBP23.64■■□□□ 1.37
AC009041.3-201ENST00000564390 MRPS33Q9Y291 106 aaKnown RBP23.64■■□□□ 1.37
AC009041.3-201ENST00000564390 IKBKGQ9Y6K9 419 aa23.64■■□□□ 1.37
AC009041.3-201ENST00000564390 TRBV11-1A0A0K0K1C0 115 aa23.63■■□□□ 1.37
AC009041.3-201ENST00000564390 CYR61O00622 381 aa23.63■■□□□ 1.37
AC009041.3-201ENST00000564390 CLDN4O14493 209 aa23.63■■□□□ 1.37
AC009041.3-201ENST00000564390 HSD17B7P56937 341 aa23.63■■□□□ 1.37
AC009041.3-201ENST00000564390 ZNF595Q8IYB9 648 aa23.63■■□□□ 1.37
AC009041.3-201ENST00000564390 THAP3Q8WTV1 239 aaPredicted RBP23.63■■□□□ 1.37
AC009041.3-201ENST00000564390 SORBS1Q9BX66 1292 aaKnown RBP23.63■■□□□ 1.37
AC009041.3-201ENST00000564390 OR51B5Q9H339 312 aa23.63■■□□□ 1.37
AC009041.3-201ENST00000564390 KLK8O60259 260 aa23.62■■□□□ 1.37
AC009041.3-201ENST00000564390 DDAH2O95865 285 aa23.62■■□□□ 1.37
AC009041.3-201ENST00000564390 MYBL2P10244 700 aa23.62■■□□□ 1.37
AC009041.3-201ENST00000564390 ATP5A1P25705 553 aaKnown RBP23.62■■□□□ 1.37
AC009041.3-201ENST00000564390 SSR2P43308 183 aa23.62■■□□□ 1.37
AC009041.3-201ENST00000564390 MAGEA12P43365 314 aa23.62■■□□□ 1.37
AC009041.3-201ENST00000564390 PCDH1Q08174 1060 aa23.62■■□□□ 1.37
AC009041.3-201ENST00000564390 TAOK1Q7L7X3 1001 aa23.62■■□□□ 1.37
AC009041.3-201ENST00000564390 GOLGA7Q7Z5G4 137 aa23.62■■□□□ 1.37
AC009041.3-201ENST00000564390 LGI4Q8N135 537 aa23.62■■□□□ 1.37
AC009041.3-201ENST00000564390 ACOT4Q8N9L9 421 aa23.62■■□□□ 1.37
AC009041.3-201ENST00000564390 APCDD1LQ8NCL9 501 aa23.62■■□□□ 1.37
AC009041.3-201ENST00000564390 B3GNT7Q8NFL0 401 aa23.62■■□□□ 1.37
AC009041.3-201ENST00000564390 HUS1BQ8NHY5 278 aa23.62■■□□□ 1.37
AC009041.3-201ENST00000564390 DCAKDQ8WVC6 231 aa23.62■■□□□ 1.37
AC009041.3-201ENST00000564390 ISL2Q96A47 359 aa23.62■■□□□ 1.37
AC009041.3-201ENST00000564390 MAPKAP1Q9BPZ7 522 aa23.62■■□□□ 1.37
AC009041.3-201ENST00000564390 TBCDQ9BTW9 1192 aa23.62■■□□□ 1.37
AC009041.3-201ENST00000564390 DEFB126Q9BYW3 111 aa23.62■■□□□ 1.37
AC009041.3-201ENST00000564390 ACTR8Q9H981 624 aa23.62■■□□□ 1.37
AC009041.3-201ENST00000564390 NFU1Q9UMS0 254 aa23.62■■□□□ 1.37
AC009041.3-201ENST00000564390 SPTAN1Q13813 2472 aaKnown RBP23.62■■□□□ 1.37
AC009041.3-201ENST00000564390 CCDC189A1A4V9 331 aa23.61■■□□□ 1.37
AC009041.3-201ENST00000564390 CRYABP02511 175 aaKnown RBP23.61■■□□□ 1.37
AC009041.3-201ENST00000564390 TUBB4AP04350 444 aa23.61■■□□□ 1.37
AC009041.3-201ENST00000564390 SERPINB9P50453 376 aa23.61■■□□□ 1.37
AC009041.3-201ENST00000564390 MLF1P58340 268 aa23.61■■□□□ 1.37
AC009041.3-201ENST00000564390 GTF2H2Q13888 395 aa23.61■■□□□ 1.37
AC009041.3-201ENST00000564390 TMEM35AQ53FP2 167 aa23.61■■□□□ 1.37
AC009041.3-201ENST00000564390 KHDRBS2Q5VWX1 349 aaKnown RBP23.61■■□□□ 1.37
AC009041.3-201ENST00000564390 GTF2H2CQ6P1K8 395 aa23.61■■□□□ 1.37
AC009041.3-201ENST00000564390 PTGR2Q8N8N7 351 aaPredicted RBP23.61■■□□□ 1.37
AC009041.3-201ENST00000564390 SREK1Q8WXA9 508 aaKnown RBP23.61■■□□□ 1.37
AC009041.3-201ENST00000564390 NCLNQ969V3 563 aa23.61■■□□□ 1.37
AC009041.3-201ENST00000564390 CMTM7Q96FZ5 175 aa23.61■■□□□ 1.37
AC009041.3-201ENST00000564390 SCYL1Q96KG9 808 aa23.61■■□□□ 1.37
AC009041.3-201ENST00000564390 MTERF1Q99551 399 aaKnown RBP23.61■■□□□ 1.37
AC009041.3-201ENST00000564390 ROGDIQ9GZN7 287 aa23.61■■□□□ 1.37
AC009041.3-201ENST00000564390 DMRT3Q9NQL9 472 aa23.61■■□□□ 1.37
AC009041.3-201ENST00000564390 KCMF1Q9P0J7 381 aa23.61■■□□□ 1.37
AC009041.3-201ENST00000564390 LRFN1Q9P244 771 aa23.61■■□□□ 1.37
AC009041.3-201ENST00000564390 XPR1Q9UBH6 696 aa23.61■■□□□ 1.37
AC009041.3-201ENST00000564390 ZNF223Q9UK11 482 aaPredicted RBP23.61■■□□□ 1.37
AC009041.3-201ENST00000564390 A0A087WUV0 522 aaPredicted RBP23.6■■□□□ 1.37
AC009041.3-201ENST00000564390 TRIM49D1C9J1S8 452 aa23.6■■□□□ 1.37
AC009041.3-201ENST00000564390 LRRTM2O43300 516 aa23.6■■□□□ 1.37
AC009041.3-201ENST00000564390 NEURL1O76050 574 aa23.6■■□□□ 1.37
AC009041.3-201ENST00000564390 WISP2O76076 250 aa23.6■■□□□ 1.37
AC009041.3-201ENST00000564390 CD46P15529 392 aa23.6■■□□□ 1.37
AC009041.3-201ENST00000564390 HIST1H1TP22492 207 aaPredicted RBP23.6■■□□□ 1.37
AC009041.3-201ENST00000564390 EEF1DP29692 281 aaKnown RBP23.6■■□□□ 1.37
AC009041.3-201ENST00000564390 SERPINB1P30740 379 aa23.6■■□□□ 1.37
AC009041.3-201ENST00000564390 ID2Q02363 134 aa23.6■■□□□ 1.37
AC009041.3-201ENST00000564390 PCBP2Q15366 365 aaKnown RBP eCLIP23.6■■□□□ 1.37
AC009041.3-201ENST00000564390 C4orf17Q53FE4 359 aa23.6■■□□□ 1.37
AC009041.3-201ENST00000564390 GFRALQ6UXV0 394 aa23.6■■□□□ 1.37
AC009041.3-201ENST00000564390 CHSY3Q70JA7 882 aa23.6■■□□□ 1.37
AC009041.3-201ENST00000564390 SRFBP1Q8NEF9 429 aaKnown RBP23.6■■□□□ 1.37
AC009041.3-201ENST00000564390 PHF21BQ96EK2 531 aa23.6■■□□□ 1.37
AC009041.3-201ENST00000564390 SCMH1Q96GD3 660 aa23.6■■□□□ 1.37
AC009041.3-201ENST00000564390 IPPKQ9H8X2 491 aa23.6■■□□□ 1.37
AC009041.3-201ENST00000564390 LYRM4Q9HD34 91 aa23.6■■□□□ 1.37
AC009041.3-201ENST00000564390 ADAP2Q9NPF8 381 aa23.6■■□□□ 1.37
AC009041.3-201ENST00000564390 FBXW2Q9UKT8 454 aa23.6■■□□□ 1.37
AC009041.3-201ENST00000564390 WIPF3A6NGB9 483 aa23.59■■□□□ 1.37
AC009041.3-201ENST00000564390 LDB3O75112 727 aa23.59■■□□□ 1.37
AC009041.3-201ENST00000564390 KRT38O76015 456 aa23.59■■□□□ 1.37
AC009041.3-201ENST00000564390 UNC5CO95185 931 aa23.59■■□□□ 1.37
AC009041.3-201ENST00000564390 IFNA16P05015 189 aa23.59■■□□□ 1.37
AC009041.3-201ENST00000564390 CLCN2P51788 898 aa23.59■■□□□ 1.37
AC009041.3-201ENST00000564390 RAP1GDS1P52306 607 aa23.59■■□□□ 1.37
AC009041.3-201ENST00000564390 RCN2Q14257 317 aa23.59■■□□□ 1.37
AC009041.3-201ENST00000564390 TERF2Q15554 542 aa23.59■■□□□ 1.37
AC009041.3-201ENST00000564390 CPSF6Q16630 551 aaKnown RBP eCLIP23.59■■□□□ 1.37
AC009041.3-201ENST00000564390 AP5B1Q2VPB7 878 aa23.59■■□□□ 1.37
AC009041.3-201ENST00000564390 C1QL3Q5VWW1 255 aa23.59■■□□□ 1.37
AC009041.3-201ENST00000564390 GALNTL5Q7Z4T8 443 aa23.59■■□□□ 1.37
AC009041.3-201ENST00000564390 CEP112Q8N8E3 955 aa23.59■■□□□ 1.37
AC009041.3-201ENST00000564390 DNAJB8Q8NHS0 232 aa23.59■■□□□ 1.37
AC009041.3-201ENST00000564390 TSPAN10Q9H1Z9 355 aaPredicted RBP23.59■■□□□ 1.37
AC009041.3-201ENST00000564390 ICE1Q9Y2F5 2266 aa23.59■■□□□ 1.37
AC009041.3-201ENST00000564390 SVILO95425 2214 aa23.59■■□□□ 1.37
AC009041.3-201ENST00000564390 EXOC1LA0A1B0GW35 172 aa23.58■■□□□ 1.37
AC009041.3-201ENST00000564390 CTNSO60931 367 aa23.58■■□□□ 1.37
AC009041.3-201ENST00000564390 SLC25A12O75746 678 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms