RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 SAP18O00422 153 aaKnown RBP18.67■□□□□ 0.58
SHCBP1-203ENST00000564272 CYR61O00622 381 aa18.67■□□□□ 0.58
SHCBP1-203ENST00000564272 LDLRP01130 860 aa18.67■□□□□ 0.58
SHCBP1-203ENST00000564272 TGFB1P01137 390 aa18.67■□□□□ 0.58
SHCBP1-203ENST00000564272 MST1P26927 711 aa18.67■□□□□ 0.58
SHCBP1-203ENST00000564272 TPP2P29144 1249 aaPredicted RBP18.67■□□□□ 0.58
SHCBP1-203ENST00000564272 HSD17B7P56937 341 aa18.67■□□□□ 0.58
SHCBP1-203ENST00000564272 KCNK10P57789 538 aa18.67■□□□□ 0.58
SHCBP1-203ENST00000564272 DDX39BQ13838 428 aaKnown RBP18.67■□□□□ 0.58
SHCBP1-203ENST00000564272 SPINK14Q6IE38 97 aa18.67■□□□□ 0.58
SHCBP1-203ENST00000564272 RPS19BP1Q86WX3 136 aaKnown RBP18.67■□□□□ 0.58
SHCBP1-203ENST00000564272 LGI4Q8N135 537 aa18.67■□□□□ 0.58
SHCBP1-203ENST00000564272 KIF18AQ8NI77 898 aa18.67■□□□□ 0.58
SHCBP1-203ENST00000564272 ISL2Q96A47 359 aa18.67■□□□□ 0.58
SHCBP1-203ENST00000564272 C5orf34Q96MH7 638 aa18.67■□□□□ 0.58
SHCBP1-203ENST00000564272 KLHL1Q9NR64 748 aa18.67■□□□□ 0.58
SHCBP1-203ENST00000564272 MRPS33Q9Y291 106 aaKnown RBP18.67■□□□□ 0.58
SHCBP1-203ENST00000564272 IKBKGQ9Y6K9 419 aa18.67■□□□□ 0.58
SHCBP1-203ENST00000564272 TRBV11-1A0A0K0K1C0 115 aa18.66■□□□□ 0.58
SHCBP1-203ENST00000564272 MYOCOSA0A1B0GUC4 107 aa18.66■□□□□ 0.58
SHCBP1-203ENST00000564272 CLDN4O14493 209 aa18.66■□□□□ 0.58
SHCBP1-203ENST00000564272 SIX3O95343 332 aaPredicted RBP18.66■□□□□ 0.58
SHCBP1-203ENST00000564272 DDAH2O95865 285 aa18.66■□□□□ 0.58
SHCBP1-203ENST00000564272 MYBL2P10244 700 aa18.66■□□□□ 0.58
SHCBP1-203ENST00000564272 ATP5A1P25705 553 aaKnown RBP18.66■□□□□ 0.58
SHCBP1-203ENST00000564272 SERPINB1P30740 379 aa18.66■□□□□ 0.58
SHCBP1-203ENST00000564272 SERPINB9P50453 376 aa18.66■□□□□ 0.58
SHCBP1-203ENST00000564272 OC90Q02509 493 aaPredicted RBP18.66■□□□□ 0.58
SHCBP1-203ENST00000564272 ZNF468Q5VIY5 522 aaPredicted RBP18.66■□□□□ 0.58
SHCBP1-203ENST00000564272 TAOK1Q7L7X3 1001 aa18.66■□□□□ 0.58
SHCBP1-203ENST00000564272 GOLGA7Q7Z5G4 137 aa18.66■□□□□ 0.58
SHCBP1-203ENST00000564272 ZNF595Q8IYB9 648 aa18.66■□□□□ 0.58
SHCBP1-203ENST00000564272 APCDD1LQ8NCL9 501 aa18.66■□□□□ 0.58
SHCBP1-203ENST00000564272 B3GNT7Q8NFL0 401 aa18.66■□□□□ 0.58
SHCBP1-203ENST00000564272 HUS1BQ8NHY5 278 aa18.66■□□□□ 0.58
SHCBP1-203ENST00000564272 DCAKDQ8WVC6 231 aa18.66■□□□□ 0.58
SHCBP1-203ENST00000564272 MAPKAP1Q9BPZ7 522 aa18.66■□□□□ 0.58
SHCBP1-203ENST00000564272 TBCDQ9BTW9 1192 aa18.66■□□□□ 0.58
SHCBP1-203ENST00000564272 SORBS1Q9BX66 1292 aaKnown RBP18.66■□□□□ 0.58
SHCBP1-203ENST00000564272 ROGDIQ9GZN7 287 aa18.66■□□□□ 0.58
SHCBP1-203ENST00000564272 OR51B5Q9H339 312 aa18.66■□□□□ 0.58
SHCBP1-203ENST00000564272 ACTR8Q9H981 624 aa18.66■□□□□ 0.58
SHCBP1-203ENST00000564272 KCMF1Q9P0J7 381 aa18.66■□□□□ 0.58
SHCBP1-203ENST00000564272 PLEKHB1Q9UF11 243 aaPredicted RBP18.66■□□□□ 0.58
SHCBP1-203ENST00000564272 NFU1Q9UMS0 254 aa18.66■□□□□ 0.58
SHCBP1-203ENST00000564272 DOPEY1Q5JWR5 2465 aa18.65■□□□□ 0.58
SHCBP1-203ENST00000564272 A0A087WUV0 522 aaPredicted RBP18.65■□□□□ 0.58
SHCBP1-203ENST00000564272 NEURL1O76050 574 aa18.65■□□□□ 0.58
SHCBP1-203ENST00000564272 CRYABP02511 175 aaKnown RBP18.65■□□□□ 0.58
SHCBP1-203ENST00000564272 HIST1H1TP22492 207 aaPredicted RBP18.65■□□□□ 0.58
SHCBP1-203ENST00000564272 SSR2P43308 183 aa18.65■□□□□ 0.58
SHCBP1-203ENST00000564272 MLF1P58340 268 aa18.65■□□□□ 0.58
SHCBP1-203ENST00000564272 GTF2H2Q13888 395 aa18.65■□□□□ 0.58
SHCBP1-203ENST00000564272 PCBP2Q15366 365 aaKnown RBP eCLIP18.65■□□□□ 0.58
SHCBP1-203ENST00000564272 TERF2Q15554 542 aa18.65■□□□□ 0.58
SHCBP1-203ENST00000564272 TMEM35AQ53FP2 167 aa18.65■□□□□ 0.58
SHCBP1-203ENST00000564272 KHDRBS2Q5VWX1 349 aaKnown RBP18.65■□□□□ 0.58
SHCBP1-203ENST00000564272 GTF2H2CQ6P1K8 395 aa18.65■□□□□ 0.58
SHCBP1-203ENST00000564272 CEP112Q8N8E3 955 aa18.65■□□□□ 0.58
SHCBP1-203ENST00000564272 PTGR2Q8N8N7 351 aaPredicted RBP18.65■□□□□ 0.58
SHCBP1-203ENST00000564272 ACOT4Q8N9L9 421 aa18.65■□□□□ 0.58
SHCBP1-203ENST00000564272 SRFBP1Q8NEF9 429 aaKnown RBP18.65■□□□□ 0.58
SHCBP1-203ENST00000564272 NCLNQ969V3 563 aa18.65■□□□□ 0.58
SHCBP1-203ENST00000564272 CMTM7Q96FZ5 175 aa18.65■□□□□ 0.58
SHCBP1-203ENST00000564272 SCMH1Q96GD3 660 aa18.65■□□□□ 0.58
SHCBP1-203ENST00000564272 SCYL1Q96KG9 808 aa18.65■□□□□ 0.58
SHCBP1-203ENST00000564272 DEFB126Q9BYW3 111 aa18.65■□□□□ 0.58
SHCBP1-203ENST00000564272 LYRM4Q9HD34 91 aa18.65■□□□□ 0.58
SHCBP1-203ENST00000564272 DMRT3Q9NQL9 472 aa18.65■□□□□ 0.58
SHCBP1-203ENST00000564272 XPR1Q9UBH6 696 aa18.65■□□□□ 0.58
SHCBP1-203ENST00000564272 ZNF223Q9UK11 482 aaPredicted RBP18.65■□□□□ 0.58
SHCBP1-203ENST00000564272 WIPF3A6NGB9 483 aa18.64■□□□□ 0.57
SHCBP1-203ENST00000564272 TRIM49D1C9J1S8 452 aa18.64■□□□□ 0.57
SHCBP1-203ENST00000564272 SCELO95171 688 aa18.64■□□□□ 0.57
SHCBP1-203ENST00000564272 EEF1DP29692 281 aaKnown RBP18.64■□□□□ 0.57
SHCBP1-203ENST00000564272 RCN2Q14257 317 aa18.64■□□□□ 0.57
SHCBP1-203ENST00000564272 AP5B1Q2VPB7 878 aa18.64■□□□□ 0.57
SHCBP1-203ENST00000564272 C4orf17Q53FE4 359 aa18.64■□□□□ 0.57
SHCBP1-203ENST00000564272 LIPJQ5W064 366 aa18.64■□□□□ 0.57
SHCBP1-203ENST00000564272 CHSY3Q70JA7 882 aa18.64■□□□□ 0.57
SHCBP1-203ENST00000564272 DNAJB8Q8NHS0 232 aa18.64■□□□□ 0.57
SHCBP1-203ENST00000564272 THAP3Q8WTV1 239 aaPredicted RBP18.64■□□□□ 0.57
SHCBP1-203ENST00000564272 MTERF1Q99551 399 aaKnown RBP18.64■□□□□ 0.57
SHCBP1-203ENST00000564272 IPPKQ9H8X2 491 aa18.64■□□□□ 0.57
SHCBP1-203ENST00000564272 ADAP2Q9NPF8 381 aa18.64■□□□□ 0.57
SHCBP1-203ENST00000564272 LRFN1Q9P244 771 aa18.64■□□□□ 0.57
SHCBP1-203ENST00000564272 PCDHGB6Q9Y5F9 930 aa18.64■□□□□ 0.57
SHCBP1-203ENST00000564272 LRRTM2O43300 516 aa18.63■□□□□ 0.57
SHCBP1-203ENST00000564272 CTNSO60931 367 aa18.63■□□□□ 0.57
SHCBP1-203ENST00000564272 KRT38O76015 456 aa18.63■□□□□ 0.57
SHCBP1-203ENST00000564272 WISP2O76076 250 aa18.63■□□□□ 0.57
SHCBP1-203ENST00000564272 IFNA16P05015 189 aa18.63■□□□□ 0.57
SHCBP1-203ENST00000564272 CD46P15529 392 aa18.63■□□□□ 0.57
SHCBP1-203ENST00000564272 CLCN2P51788 898 aa18.63■□□□□ 0.57
SHCBP1-203ENST00000564272 RAP1GDS1P52306 607 aa18.63■□□□□ 0.57
SHCBP1-203ENST00000564272 ID2Q02363 134 aa18.63■□□□□ 0.57
SHCBP1-203ENST00000564272 CPSF6Q16630 551 aaKnown RBP eCLIP18.63■□□□□ 0.57
SHCBP1-203ENST00000564272 DEPDC1Q5TB30 811 aa18.63■□□□□ 0.57
SHCBP1-203ENST00000564272 GFRALQ6UXV0 394 aa18.63■□□□□ 0.57
SHCBP1-203ENST00000564272 PHF21BQ96EK2 531 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms