RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 TXNDC9O14530 226 aa9.54□□□□□ -0.88
HDGFL3-204ENST00000563790 FGFR1OPO95684 399 aaKnown RBP9.54□□□□□ -0.88
HDGFL3-204ENST00000563790 CPN1P15169 458 aa9.54□□□□□ -0.88
HDGFL3-204ENST00000563790 GDF1P27539 372 aa9.54□□□□□ -0.88
HDGFL3-204ENST00000563790 CDR2Q01850 454 aa9.54□□□□□ -0.88
HDGFL3-204ENST00000563790 OGDHQ02218 1023 aa9.54□□□□□ -0.88
HDGFL3-204ENST00000563790 NAA25Q14CX7 972 aa9.54□□□□□ -0.88
HDGFL3-204ENST00000563790 C1orf229Q6ZS94 237 aaPredicted RBP9.54□□□□□ -0.88
HDGFL3-204ENST00000563790 PRSS41Q7RTY9 318 aa9.54□□□□□ -0.88
HDGFL3-204ENST00000563790 POLNQ7Z5Q5 900 aa9.54□□□□□ -0.88
HDGFL3-204ENST00000563790 CDKL3Q8IVW4 592 aaPredicted RBP9.54□□□□□ -0.88
HDGFL3-204ENST00000563790 ZNF540Q8NDQ6 660 aa9.54□□□□□ -0.88
HDGFL3-204ENST00000563790 OR6P1Q8NGX9 317 aa9.54□□□□□ -0.88
HDGFL3-204ENST00000563790 OR2L8Q8NGY9 312 aa9.54□□□□□ -0.88
HDGFL3-204ENST00000563790 TAF15Q92804 592 aaKnown RBP eCLIP9.54□□□□□ -0.88
HDGFL3-204ENST00000563790 ABTB1Q969K4 478 aaPredicted RBP9.54□□□□□ -0.88
HDGFL3-204ENST00000563790 LRRC58Q96CX6 371 aa9.54□□□□□ -0.88
HDGFL3-204ENST00000563790 OR1F2PQ96R84 312 aa9.54□□□□□ -0.88
HDGFL3-204ENST00000563790 STK33Q9BYT3 514 aa9.54□□□□□ -0.88
HDGFL3-204ENST00000563790 LIN28AQ9H9Z2 209 aaKnown RBP9.54□□□□□ -0.88
HDGFL3-204ENST00000563790 SAMD15Q9P1V8 674 aa9.54□□□□□ -0.88
HDGFL3-204ENST00000563790 MYOTQ9UBF9 498 aa9.54□□□□□ -0.88
HDGFL3-204ENST00000563790 AP4E1Q9UPM8 1137 aa9.54□□□□□ -0.88
HDGFL3-204ENST00000563790 TTLL3Q9Y4R7 772 aa9.54□□□□□ -0.88
HDGFL3-204ENST00000563790 PRKNO60260 465 aaPredicted RBP9.53□□□□□ -0.88
HDGFL3-204ENST00000563790 PHF2O75151 1096 aa9.53□□□□□ -0.88
HDGFL3-204ENST00000563790 VPS26AO75436 327 aa9.53□□□□□ -0.88
HDGFL3-204ENST00000563790 PRSS56P0CW18 603 aa9.53□□□□□ -0.88
HDGFL3-204ENST00000563790 GPD1P21695 349 aa9.53□□□□□ -0.88
HDGFL3-204ENST00000563790 IL10P22301 178 aa9.53□□□□□ -0.88
HDGFL3-204ENST00000563790 KIR2DL2P43627 348 aaPredicted RBP9.53□□□□□ -0.88
HDGFL3-204ENST00000563790 CHN2P52757 468 aa9.53□□□□□ -0.88
HDGFL3-204ENST00000563790 RPL7AP62424 266 aaKnown RBP9.53□□□□□ -0.88
HDGFL3-204ENST00000563790 NDUFA9Q16795 377 aa9.53□□□□□ -0.88
HDGFL3-204ENST00000563790 STAC2Q6ZMT1 411 aa9.53□□□□□ -0.88
HDGFL3-204ENST00000563790 MON1BQ7L1V2 547 aa9.53□□□□□ -0.88
HDGFL3-204ENST00000563790 ZNF677Q86XU0 584 aa9.53□□□□□ -0.88
HDGFL3-204ENST00000563790 RCOR2Q8IZ40 523 aa9.53□□□□□ -0.88
HDGFL3-204ENST00000563790 ZNF610Q8N9Z0 462 aa9.53□□□□□ -0.88
HDGFL3-204ENST00000563790 OR2L3Q8NG85 312 aa9.53□□□□□ -0.88
HDGFL3-204ENST00000563790 MUC7Q8TAX7 377 aa9.53□□□□□ -0.88
HDGFL3-204ENST00000563790 VMP1Q96GC9 406 aa9.53□□□□□ -0.88
HDGFL3-204ENST00000563790 TACO1Q9BSH4 297 aaKnown RBP9.53□□□□□ -0.88
HDGFL3-204ENST00000563790 G6PC3Q9BUM1 346 aa9.53□□□□□ -0.88
HDGFL3-204ENST00000563790 OR10A4Q9H209 315 aa9.53□□□□□ -0.88
HDGFL3-204ENST00000563790 DHX35Q9H5Z1 703 aaKnown RBP9.53□□□□□ -0.88
HDGFL3-204ENST00000563790 PPIEQ9UNP9 301 aaKnown RBP9.53□□□□□ -0.88
HDGFL3-204ENST00000563790 SPO11Q9Y5K1 396 aa9.53□□□□□ -0.88
HDGFL3-204ENST00000563790 DNAJC9-AS1A6NH13 148 aa9.52□□□□□ -0.89
HDGFL3-204ENST00000563790 SIGLEC16A6NMB1 481 aa9.52□□□□□ -0.89
HDGFL3-204ENST00000563790 B4DSR2 109 aa9.52□□□□□ -0.89
HDGFL3-204ENST00000563790 GOLGA8MH3BSY2 632 aa9.52□□□□□ -0.89
HDGFL3-204ENST00000563790 P2RX6O15547 441 aa9.52□□□□□ -0.89
HDGFL3-204ENST00000563790 ZFAND5O76080 213 aa9.52□□□□□ -0.89
HDGFL3-204ENST00000563790 TGM6O95932 706 aa9.52□□□□□ -0.89
HDGFL3-204ENST00000563790 C1QAP02745 245 aa9.52□□□□□ -0.89
HDGFL3-204ENST00000563790 KRT1P04264 644 aa9.52□□□□□ -0.89
HDGFL3-204ENST00000563790 HPNP05981 417 aa9.52□□□□□ -0.89
HDGFL3-204ENST00000563790 RNASE1P07998 156 aaKnown RBP9.52□□□□□ -0.89
HDGFL3-204ENST00000563790 TACSTD2P09758 323 aa9.52□□□□□ -0.89
HDGFL3-204ENST00000563790 KRT3P12035 628 aa9.52□□□□□ -0.89
HDGFL3-204ENST00000563790 TTKP33981 857 aa9.52□□□□□ -0.89
HDGFL3-204ENST00000563790 MTIF2P46199 727 aaKnown RBP9.52□□□□□ -0.89
HDGFL3-204ENST00000563790 HCAR3P49019 387 aa9.52□□□□□ -0.89
HDGFL3-204ENST00000563790 KLK7P49862 253 aa9.52□□□□□ -0.89
HDGFL3-204ENST00000563790 ZNF143P52747 638 aaPredicted RBP9.52□□□□□ -0.89
HDGFL3-204ENST00000563790 CD69Q07108 199 aa9.52□□□□□ -0.89
HDGFL3-204ENST00000563790 BECN1Q14457 450 aa9.52□□□□□ -0.89
HDGFL3-204ENST00000563790 PHF13Q86YI8 300 aaPredicted RBP9.52□□□□□ -0.89
HDGFL3-204ENST00000563790 RELL1Q8IUW5 271 aa9.52□□□□□ -0.89
HDGFL3-204ENST00000563790 MCOLN3Q8TDD5 553 aa9.52□□□□□ -0.89
HDGFL3-204ENST00000563790 TMIGD2Q96BF3 282 aa9.52□□□□□ -0.89
HDGFL3-204ENST00000563790 ZNF845Q96IR2 970 aaPredicted RBP9.52□□□□□ -0.89
HDGFL3-204ENST00000563790 DUX5Q96PT3 197 aa9.52□□□□□ -0.89
HDGFL3-204ENST00000563790 PEBP4Q96S96 227 aa9.52□□□□□ -0.89
HDGFL3-204ENST00000563790 MIPEPQ99797 713 aa9.52□□□□□ -0.89
HDGFL3-204ENST00000563790 CCDC77Q9BR77 488 aa9.52□□□□□ -0.89
HDGFL3-204ENST00000563790 ACTR6Q9GZN1 396 aa9.52□□□□□ -0.89
HDGFL3-204ENST00000563790 SAP130Q9H0E3 1048 aa9.52□□□□□ -0.89
HDGFL3-204ENST00000563790 PDCL3Q9H2J4 239 aa9.52□□□□□ -0.89
HDGFL3-204ENST00000563790 PROK2Q9HC23 129 aa9.52□□□□□ -0.89
HDGFL3-204ENST00000563790 HAUS2Q9NVX0 235 aa9.52□□□□□ -0.89
HDGFL3-204ENST00000563790 HIF1ANQ9NWT6 349 aa9.52□□□□□ -0.89
HDGFL3-204ENST00000563790 MOKQ9UQ07 419 aa9.52□□□□□ -0.89
HDGFL3-204ENST00000563790 RUVBL2Q9Y230 463 aaKnown RBP9.52□□□□□ -0.89
HDGFL3-204ENST00000563790 GRIP1Q9Y3R0 1128 aa9.52□□□□□ -0.89
HDGFL3-204ENST00000563790 ARHGAP32A7KAX9 2087 aa9.52□□□□□ -0.89
HDGFL3-204ENST00000563790 DOCK11Q5JSL3 2073 aa9.51□□□□□ -0.89
HDGFL3-204ENST00000563790 C5orf63A6NC05 138 aa9.51□□□□□ -0.89
HDGFL3-204ENST00000563790 LILRA1O75019 489 aa9.51□□□□□ -0.89
HDGFL3-204ENST00000563790 GFPT2O94808 682 aa9.51□□□□□ -0.89
HDGFL3-204ENST00000563790 MPIG6BO95866 241 aa9.51□□□□□ -0.89
HDGFL3-204ENST00000563790 PSMB5P28074 263 aa9.51□□□□□ -0.89
HDGFL3-204ENST00000563790 CDK9P50750 372 aaKnown RBP9.51□□□□□ -0.89
HDGFL3-204ENST00000563790 C21orf58P58505 322 aa9.51□□□□□ -0.89
HDGFL3-204ENST00000563790 BSPH1Q075Z2 132 aa9.51□□□□□ -0.89
HDGFL3-204ENST00000563790 ZNF844Q08AG5 666 aa9.51□□□□□ -0.89
HDGFL3-204ENST00000563790 TBL3Q12788 808 aaKnown RBP9.51□□□□□ -0.89
HDGFL3-204ENST00000563790 PIGHQ14442 188 aaPredicted RBP9.51□□□□□ -0.89
HDGFL3-204ENST00000563790 CLEC16AQ2KHT3 1053 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms