RNA–Protein interactions for RNA: ENST00000563643.1

E4F1-203, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-203ENST00000563643 POU4F1Q01851 419 aa16.87■□□□□ 0.29
E4F1-203ENST00000563643 GARNL3Q5VVW2 1013 aa16.87■□□□□ 0.29
E4F1-203ENST00000563643 FBXO42Q6P3S6 717 aa16.87■□□□□ 0.29
E4F1-203ENST00000563643 PAPD4Q6PIY7 484 aaKnown RBP16.87■□□□□ 0.29
E4F1-203ENST00000563643 IFT20Q8IY31 132 aa16.87■□□□□ 0.29
E4F1-203ENST00000563643 ARHGEF39Q8N4T4 335 aa16.87■□□□□ 0.29
E4F1-203ENST00000563643 PPM1NQ8N819 430 aa16.87■□□□□ 0.29
E4F1-203ENST00000563643 ZFP62Q8NB50 900 aaPredicted RBP16.87■□□□□ 0.29
E4F1-203ENST00000563643 OR2A1Q8NGT9 310 aa16.87■□□□□ 0.29
E4F1-203ENST00000563643 MCOLN3Q8TDD5 553 aa16.87■□□□□ 0.29
E4F1-203ENST00000563643 ZNF480Q8WV37 535 aa16.87■□□□□ 0.29
E4F1-203ENST00000563643 GPR22Q99680 433 aa16.87■□□□□ 0.29
E4F1-203ENST00000563643 PLCD4Q9BRC7 762 aa16.87■□□□□ 0.29
E4F1-203ENST00000563643 DEFB127Q9H1M4 99 aa16.87■□□□□ 0.29
E4F1-203ENST00000563643 PARVBQ9HBI1 364 aa16.87■□□□□ 0.29
E4F1-203ENST00000563643 POPDC3Q9HBV1 291 aa16.87■□□□□ 0.29
E4F1-203ENST00000563643 NINJ2Q9NZG7 142 aa16.87■□□□□ 0.29
E4F1-203ENST00000563643 ADAMTS6Q9UKP5 1117 aa16.87■□□□□ 0.29
E4F1-203ENST00000563643 OR2W5A6NFC9 320 aa16.86■□□□□ 0.29
E4F1-203ENST00000563643 TRIM64A6NGJ6 449 aa16.86■□□□□ 0.29
E4F1-203ENST00000563643 TRIM64BA6NI03 449 aa16.86■□□□□ 0.29
E4F1-203ENST00000563643 SYF2O95926 243 aaKnown RBP16.86■□□□□ 0.29
E4F1-203ENST00000563643 SAT1P21673 171 aa16.86■□□□□ 0.29
E4F1-203ENST00000563643 PHBP35232 272 aa16.86■□□□□ 0.29
E4F1-203ENST00000563643 HLCSP50747 726 aa16.86■□□□□ 0.29
E4F1-203ENST00000563643 GRTP1Q5TC63 336 aa16.86■□□□□ 0.29
E4F1-203ENST00000563643 RTL6Q6ICC9 239 aa16.86■□□□□ 0.29
E4F1-203ENST00000563643 HMBOX1Q6NT76 420 aa16.86■□□□□ 0.29
E4F1-203ENST00000563643 PAOXQ6QHF9 649 aa16.86■□□□□ 0.29
E4F1-203ENST00000563643 NKAPQ8N5F7 415 aaKnown RBP16.86■□□□□ 0.29
E4F1-203ENST00000563643 ANKRD7Q92527 254 aa16.86■□□□□ 0.29
E4F1-203ENST00000563643 B4GALT7Q9UBV7 327 aa16.86■□□□□ 0.29
E4F1-203ENST00000563643 PDE10AQ9Y233 779 aa16.86■□□□□ 0.29
E4F1-203ENST00000563643 MTO1Q9Y2Z2 717 aaKnown RBP16.86■□□□□ 0.29
E4F1-203ENST00000563643 E7ENX8 843 aa16.85■□□□□ 0.29
E4F1-203ENST00000563643 ZNF500O60304 480 aaPredicted RBP16.85■□□□□ 0.29
E4F1-203ENST00000563643 RHOXF2BP0C7M4 288 aa16.85■□□□□ 0.29
E4F1-203ENST00000563643 TRHRP34981 398 aaPredicted RBP16.85■□□□□ 0.29
E4F1-203ENST00000563643 RPA3P35244 121 aaPredicted RBP16.85■□□□□ 0.29
E4F1-203ENST00000563643 SPRP35270 261 aaPredicted RBP16.85■□□□□ 0.29
E4F1-203ENST00000563643 SLC12A2P55011 1212 aa16.85■□□□□ 0.29
E4F1-203ENST00000563643 GPR85P60893 370 aa16.85■□□□□ 0.29
E4F1-203ENST00000563643 TAP2Q03519 686 aa16.85■□□□□ 0.29
E4F1-203ENST00000563643 ZNF460Q14592 562 aa16.85■□□□□ 0.29
E4F1-203ENST00000563643 NAA25Q14CX7 972 aa16.85■□□□□ 0.29
E4F1-203ENST00000563643 PHKG1Q16816 387 aa16.85■□□□□ 0.29
E4F1-203ENST00000563643 SFT2D3Q587I9 215 aa16.85■□□□□ 0.29
E4F1-203ENST00000563643 LRRC56Q8IYG6 542 aaPredicted RBP16.85■□□□□ 0.29
E4F1-203ENST00000563643 SHISA5Q8N114 240 aa16.85■□□□□ 0.29
E4F1-203ENST00000563643 KIF2BQ8N4N8 673 aa16.85■□□□□ 0.29
E4F1-203ENST00000563643 CREB3L4Q8TEY5 395 aa16.85■□□□□ 0.29
E4F1-203ENST00000563643 TSPAN17Q96FV3 270 aa16.85■□□□□ 0.29
E4F1-203ENST00000563643 CCDC138Q96M89 665 aa16.85■□□□□ 0.29
E4F1-203ENST00000563643 LPAR4Q99677 370 aa16.85■□□□□ 0.29
E4F1-203ENST00000563643 SH3GL2Q99962 352 aa16.85■□□□□ 0.29
E4F1-203ENST00000563643 RHOXF2Q9BQY4 288 aa16.85■□□□□ 0.29
E4F1-203ENST00000563643 FUT8Q9BYC5 575 aa16.85■□□□□ 0.29
E4F1-203ENST00000563643 CDC42EP4Q9H3Q1 356 aaKnown RBP16.85■□□□□ 0.29
E4F1-203ENST00000563643 ZNF407Q9C0G0 2248 aa16.85■□□□□ 0.29
E4F1-203ENST00000563643 BCKDKO14874 412 aa16.84■□□□□ 0.29
E4F1-203ENST00000563643 WISP3O95389 354 aaPredicted RBP16.84■□□□□ 0.29
E4F1-203ENST00000563643 ENO2P09104 434 aaPredicted RBP16.84■□□□□ 0.29
E4F1-203ENST00000563643 IMPA1P29218 277 aa16.84■□□□□ 0.29
E4F1-203ENST00000563643 CMPK1P30085 196 aa16.84■□□□□ 0.29
E4F1-203ENST00000563643 AP1S2P56377 157 aa16.84■□□□□ 0.29
E4F1-203ENST00000563643 USP10Q14694 798 aaKnown RBP16.84■□□□□ 0.29
E4F1-203ENST00000563643 EFTUD2Q15029 972 aaKnown RBP eCLIP16.84■□□□□ 0.296e-8■■■■■ 38.1
E4F1-203ENST00000563643 SUSD1Q6UWL2 747 aa16.84■□□□□ 0.29
E4F1-203ENST00000563643 LRRC75A-AS1Q8N1F1 130 aa16.84■□□□□ 0.29
E4F1-203ENST00000563643 ELP5Q8TE02 316 aa16.84■□□□□ 0.29
E4F1-203ENST00000563643 RNASE6Q93091 150 aaKnown RBP16.84■□□□□ 0.29
E4F1-203ENST00000563643 DPH7Q9BTV6 452 aa16.84■□□□□ 0.29
E4F1-203ENST00000563643 ACSS3Q9H6R3 686 aa16.84■□□□□ 0.29
E4F1-203ENST00000563643 NFU1Q9UMS0 254 aa16.84■□□□□ 0.29
E4F1-203ENST00000563643 CHD3Q12873 2000 aaKnown RBP16.84■□□□□ 0.29
E4F1-203ENST00000563643 OR14I1A6ND48 311 aa16.83■□□□□ 0.28
E4F1-203ENST00000563643 CCNDBP1O95273 360 aa16.83■□□□□ 0.28
E4F1-203ENST00000563643 HIST1H2AGP0C0S8 130 aaPredicted RBP16.83■□□□□ 0.28
E4F1-203ENST00000563643 EPXP11678 715 aa16.83■□□□□ 0.28
E4F1-203ENST00000563643 HIST1H2ADP20671 130 aa16.83■□□□□ 0.28
E4F1-203ENST00000563643 XCR1P46094 333 aa16.83■□□□□ 0.28
E4F1-203ENST00000563643 AVPR1BP47901 424 aa16.83■□□□□ 0.28
E4F1-203ENST00000563643 SLC26A5P58743 744 aa16.83■□□□□ 0.28
E4F1-203ENST00000563643 SNRPNP63162 240 aaKnown RBP16.83■□□□□ 0.28
E4F1-203ENST00000563643 FAM53BQ14153 422 aa16.83■□□□□ 0.28
E4F1-203ENST00000563643 SLMAPQ14BN4 828 aa16.83■□□□□ 0.28
E4F1-203ENST00000563643 ZKSCAN8Q15776 578 aaPredicted RBP16.83■□□□□ 0.28
E4F1-203ENST00000563643 PODNL1Q6PEZ8 512 aa16.83■□□□□ 0.28
E4F1-203ENST00000563643 YTHDF3Q7Z739 585 aaKnown RBP16.83■□□□□ 0.28
E4F1-203ENST00000563643 PPFIBP2Q8ND30 876 aa16.83■□□□□ 0.28
E4F1-203ENST00000563643 OR9A4Q8NGU2 314 aa16.83■□□□□ 0.28
E4F1-203ENST00000563643 HIST1H2AHQ96KK5 128 aa16.83■□□□□ 0.28
E4F1-203ENST00000563643 SMC6Q96SB8 1091 aa16.83■□□□□ 0.28
E4F1-203ENST00000563643 HIST1H2AJQ99878 128 aa16.83■□□□□ 0.28
E4F1-203ENST00000563643 H2AFJQ9BTM1 129 aa16.83■□□□□ 0.28
E4F1-203ENST00000563643 ACAT2Q9BWD1 397 aa16.83■□□□□ 0.28
E4F1-203ENST00000563643 TRIM54Q9BYV2 358 aa16.83■□□□□ 0.28
E4F1-203ENST00000563643 CAB39LQ9H9S4 337 aa16.83■□□□□ 0.28
E4F1-203ENST00000563643 TAC3Q9UHF0 121 aa16.83■□□□□ 0.28
E4F1-203ENST00000563643 PABPN1LA6NDY0 278 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms