RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 TMEM26Q6ZUK4 368 aa18.18■□□□□ 0.5
SMPD3-203ENST00000563226 CYP4Z1Q86W10 505 aa18.18■□□□□ 0.5
SMPD3-203ENST00000563226 TAMM41Q96BW9 452 aa18.18■□□□□ 0.5
SMPD3-203ENST00000563226 TMEM38AQ9H6F2 299 aa18.18■□□□□ 0.5
SMPD3-203ENST00000563226 TMEM184CQ9NVA4 438 aa18.18■□□□□ 0.5
SMPD3-203ENST00000563226 NDUFA13Q9P0J0 144 aa18.18■□□□□ 0.5
SMPD3-203ENST00000563226 HEBP2Q9Y5Z4 205 aa18.18■□□□□ 0.5
SMPD3-203ENST00000563226 COLEC10Q9Y6Z7 277 aa18.18■□□□□ 0.5
SMPD3-203ENST00000563226 LRRC72A6NJI9 287 aa18.18■□□□□ 0.5
SMPD3-203ENST00000563226 TRIM64CA6NLI5 447 aa18.18■□□□□ 0.5
SMPD3-203ENST00000563226 ISM1B1AKI9 464 aa18.18■□□□□ 0.5
SMPD3-203ENST00000563226 B4GALT2O60909 372 aa18.18■□□□□ 0.5
SMPD3-203ENST00000563226 APBB3O95704 486 aa18.18■□□□□ 0.5
SMPD3-203ENST00000563226 CHRM5P08912 532 aaPredicted RBP18.18■□□□□ 0.5
SMPD3-203ENST00000563226 PRIM2P49643 509 aa18.18■□□□□ 0.5
SMPD3-203ENST00000563226 ITGA1P56199 1179 aa18.18■□□□□ 0.5
SMPD3-203ENST00000563226 PCBP4P57723 403 aaKnown RBP18.18■□□□□ 0.5
SMPD3-203ENST00000563226 TUBA4AP68366 448 aa18.18■□□□□ 0.5
SMPD3-203ENST00000563226 HSPB3Q12988 150 aa18.18■□□□□ 0.5
SMPD3-203ENST00000563226 ALG11Q2TAA5 492 aa18.18■□□□□ 0.5
SMPD3-203ENST00000563226 TRIM40Q6P9F5 258 aa18.18■□□□□ 0.5
SMPD3-203ENST00000563226 AMIGO1Q86WK6 493 aa18.18■□□□□ 0.5
SMPD3-203ENST00000563226 LCN9Q8WX39 176 aa18.18■□□□□ 0.5
SMPD3-203ENST00000563226 FAM3CQ92520 227 aa18.18■□□□□ 0.5
SMPD3-203ENST00000563226 ADPRHL2Q9NX46 363 aa18.18■□□□□ 0.5
SMPD3-203ENST00000563226 IFT80Q9P2H3 777 aaPredicted RBP18.18■□□□□ 0.5
SMPD3-203ENST00000563226 ADAM29Q9UKF5 820 aa18.18■□□□□ 0.5
SMPD3-203ENST00000563226 NDRG2Q9UN36 371 aaKnown RBP18.18■□□□□ 0.5
SMPD3-203ENST00000563226 ENO4A6NNW6 628 aa18.17■□□□□ 0.5
SMPD3-203ENST00000563226 B4GAT1O43505 415 aa18.17■□□□□ 0.5
SMPD3-203ENST00000563226 BMP10O95393 424 aa18.17■□□□□ 0.5
SMPD3-203ENST00000563226 HTR1BP28222 390 aa18.17■□□□□ 0.5
SMPD3-203ENST00000563226 GRK3P35626 688 aa18.17■□□□□ 0.5
SMPD3-203ENST00000563226 SLC19A1P41440 591 aa18.17■□□□□ 0.5
SMPD3-203ENST00000563226 CDK9P50750 372 aaKnown RBP18.17■□□□□ 0.5
SMPD3-203ENST00000563226 MANFP55145 182 aaKnown RBP18.17■□□□□ 0.5
SMPD3-203ENST00000563226 ABATP80404 500 aa18.17■□□□□ 0.5
SMPD3-203ENST00000563226 CDK6Q00534 326 aa18.17■□□□□ 0.5
SMPD3-203ENST00000563226 BIRC2Q13490 618 aa18.17■□□□□ 0.5
SMPD3-203ENST00000563226 PIWIL3Q7Z3Z3 882 aaKnown RBP18.17■□□□□ 0.5
SMPD3-203ENST00000563226 GALNT5Q7Z7M9 940 aa18.17■□□□□ 0.5
SMPD3-203ENST00000563226 ZC3H7AQ8IWR0 971 aaKnown RBP18.17■□□□□ 0.5
SMPD3-203ENST00000563226 FRMD1Q8N878 549 aa18.17■□□□□ 0.5
SMPD3-203ENST00000563226 TTLQ8NG68 377 aa18.17■□□□□ 0.5
SMPD3-203ENST00000563226 OR5P2Q8WZ92 322 aa18.17■□□□□ 0.5
SMPD3-203ENST00000563226 DGCR14Q96DF8 476 aaKnown RBP18.17■□□□□ 0.5
SMPD3-203ENST00000563226 MS4A6EQ96DS6 147 aa18.17■□□□□ 0.5
SMPD3-203ENST00000563226 DOHHQ9BU89 302 aa18.17■□□□□ 0.5
SMPD3-203ENST00000563226 GABARAPL1Q9H0R8 117 aa18.17■□□□□ 0.5
SMPD3-203ENST00000563226 C6orf106Q9H6K1 298 aaPredicted RBP18.17■□□□□ 0.5
SMPD3-203ENST00000563226 SIRT3Q9NTG7 399 aaPredicted RBP18.17■□□□□ 0.5
SMPD3-203ENST00000563226 WBP11Q9Y2W2 641 aaKnown RBP18.17■□□□□ 0.5
SMPD3-203ENST00000563226 CCDC88CQ9P219 2028 aa18.16■□□□□ 0.5
SMPD3-203ENST00000563226 A0A087WXM4 84 aa18.16■□□□□ 0.5
SMPD3-203ENST00000563226 A6NCN8 305 aa18.16■□□□□ 0.5
SMPD3-203ENST00000563226 BTN3A3O00478 584 aa18.16■□□□□ 0.5
SMPD3-203ENST00000563226 KRT75O95678 551 aa18.16■□□□□ 0.5
SMPD3-203ENST00000563226 SEMA4FO95754 770 aa18.16■□□□□ 0.5
SMPD3-203ENST00000563226 DAPP51397 102 aa18.16■□□□□ 0.5
SMPD3-203ENST00000563226 SRP54P61011 504 aaKnown RBP18.16■□□□□ 0.5
SMPD3-203ENST00000563226 SELENOWP63302 87 aa18.16■□□□□ 0.5
SMPD3-203ENST00000563226 RBBP4Q09028 425 aa18.16■□□□□ 0.5
SMPD3-203ENST00000563226 CYP27C1Q4G0S4 372 aa18.16■□□□□ 0.5
SMPD3-203ENST00000563226 ZNF425Q6IV72 752 aa18.16■□□□□ 0.5
SMPD3-203ENST00000563226 NRROSQ86YC3 692 aa18.16■□□□□ 0.5
SMPD3-203ENST00000563226 OR8K5Q8NH50 307 aa18.16■□□□□ 0.5
SMPD3-203ENST00000563226 NMD3Q96D46 503 aaKnown RBP18.16■□□□□ 0.5
SMPD3-203ENST00000563226 NLNQ9BYT8 704 aa18.16■□□□□ 0.5
SMPD3-203ENST00000563226 BAG5Q9UL15 447 aa18.16■□□□□ 0.5
SMPD3-203ENST00000563226 SAMHD1Q9Y3Z3 626 aaKnown RBP18.16■□□□□ 0.5
SMPD3-203ENST00000563226 PCDHGA8Q9Y5G5 932 aa18.16■□□□□ 0.5
SMPD3-203ENST00000563226 CCDC160A6NGH7 325 aa18.16■□□□□ 0.5
SMPD3-203ENST00000563226 H3BSA7 217 aa18.16■□□□□ 0.5
SMPD3-203ENST00000563226 ERI3O43414 337 aaKnown RBP18.16■□□□□ 0.5
SMPD3-203ENST00000563226 ARAFP10398 606 aa18.16■□□□□ 0.5
SMPD3-203ENST00000563226 IL7RP16871 459 aa18.16■□□□□ 0.5
SMPD3-203ENST00000563226 FPR1P21462 350 aa18.16■□□□□ 0.5
SMPD3-203ENST00000563226 IGFBP5P24593 272 aa18.16■□□□□ 0.5
SMPD3-203ENST00000563226 CMPK1P30085 196 aa18.16■□□□□ 0.5
SMPD3-203ENST00000563226 DNAJA1P31689 397 aaKnown RBP18.16■□□□□ 0.5
SMPD3-203ENST00000563226 FRKP42685 505 aaPredicted RBP18.16■□□□□ 0.5
SMPD3-203ENST00000563226 ADPRMQ3LIE5 342 aa18.16■□□□□ 0.5
SMPD3-203ENST00000563226 TOR1AIP1Q5JTV8 583 aa18.16■□□□□ 0.5
SMPD3-203ENST00000563226 NDUFAF5Q5TEU4 345 aa18.16■□□□□ 0.5
SMPD3-203ENST00000563226 TTC23Q5W5X9 447 aa18.16■□□□□ 0.5
SMPD3-203ENST00000563226 SAXO2Q658L1 398 aa18.16■□□□□ 0.5
SMPD3-203ENST00000563226 ZNF555Q8NEP9 628 aa18.16■□□□□ 0.5
SMPD3-203ENST00000563226 NCSTNQ92542 709 aa18.16■□□□□ 0.5
SMPD3-203ENST00000563226 FCRL4Q96PJ5 515 aa18.16■□□□□ 0.5
SMPD3-203ENST00000563226 KLF15Q9UIH9 416 aa18.16■□□□□ 0.5
SMPD3-203ENST00000563226 C3orf18Q9UK00 162 aa18.16■□□□□ 0.5
SMPD3-203ENST00000563226 PCOLCE2Q9UKZ9 415 aa18.16■□□□□ 0.5
SMPD3-203ENST00000563226 PCDHGA4Q9Y5G9 962 aa18.16■□□□□ 0.5
SMPD3-203ENST00000563226 CEPT1Q9Y6K0 416 aa18.16■□□□□ 0.5
SMPD3-203ENST00000563226 AP1M2Q9Y6Q5 423 aa18.16■□□□□ 0.5
SMPD3-203ENST00000563226 PRAMEF25A6NGN4 478 aa18.15■□□□□ 0.5
SMPD3-203ENST00000563226 GLOD5A6NK44 160 aa18.15■□□□□ 0.5
SMPD3-203ENST00000563226 M0QX08 132 aa18.15■□□□□ 0.5
SMPD3-203ENST00000563226 DSTNP60981 165 aa18.15■□□□□ 0.5
SMPD3-203ENST00000563226 SFSWAPQ12872 951 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms