RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 HCN3Q9P1Z3 774 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 TRPS1Q9UHF7 1281 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 TUBD1Q9UJT1 453 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 C3orf18Q9UK00 162 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 SCN3AQ9NY46 2000 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 ARGFXA6NJG6 315 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 UBFD1O14562 309 aaKnown RBP5.83□□□□□ -1.48
CNOT1-204ENST00000563130 RGS16O15492 202 aaPredicted RBP5.83□□□□□ -1.48
CNOT1-204ENST00000563130 ETHE1O95571 254 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 MLYCDO95822 493 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 TGFB1P01137 390 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 PCNAP12004 261 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 TSPAN8P19075 237 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 MAPK1P28482 360 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 OTX2P32243 289 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 MAP2K3P46734 347 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 NEK2P51955 445 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 PLA2G16P53816 162 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 NAGLUP54802 743 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 EMP2P54851 167 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 RPS13P62277 151 aaKnown RBP5.83□□□□□ -1.48
CNOT1-204ENST00000563130 OLR1P78380 273 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 BTN3A2P78410 334 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 RHAGQ02094 409 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 LCP2Q13094 533 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 DCAF10Q5QP82 559 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 CPZQ66K79 652 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 ZNF793Q6ZN11 406 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 CHSY3Q70JA7 882 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 PRSS58Q8IYP2 241 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 PLPP5Q8NEB5 264 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 PEX11GQ96HA9 241 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 FER1L6-AS2Q96M78 137 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 SMC6Q96SB8 1091 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 TBCDQ9BTW9 1192 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 OR51B5Q9H339 312 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 KCMF1Q9P0J7 381 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 SLC17A7Q9P2U7 560 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 MID2Q9UJV3 735 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 RALYQ9UKM9 306 aaKnown RBP5.83□□□□□ -1.48
CNOT1-204ENST00000563130 MKL2Q9ULH7 1088 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 DAPP1Q9UN19 280 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 CLDN16Q9Y5I7 305 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 ACTL7BQ9Y614 415 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 IGSF10Q6WRI0 2623 aa5.83□□□□□ -1.48
CNOT1-204ENST00000563130 MED13Q9UHV7 2174 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 A0A088AWK7 358 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 IGKV3D-11A0A0A0MRZ8 115 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 A0A0G2JN53 185 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 OR2W5A6NFC9 320 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 RTCAO00442 366 aaKnown RBP5.82□□□□□ -1.48
CNOT1-204ENST00000563130 PLPP1O14494 284 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 TRIM13O60858 407 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 ALOX12BO75342 701 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 SPAG7O75391 227 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 DNAJB5O75953 348 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 OR4F21O95013 312 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 SEMA3DO95025 777 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 ESRRBO95718 433 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 FHP07954 510 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 FAM87AP0C7U9 286 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 COX6A1P12074 109 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 ZNF10P21506 573 aaPredicted RBP5.82□□□□□ -1.48
CNOT1-204ENST00000563130 HIST1H1TP22492 207 aaPredicted RBP5.82□□□□□ -1.48
CNOT1-204ENST00000563130 ATP5A1P25705 553 aaKnown RBP5.82□□□□□ -1.48
CNOT1-204ENST00000563130 PTX3P26022 381 aaPredicted RBP5.82□□□□□ -1.48
CNOT1-204ENST00000563130 RRADP55042 308 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 MTTPP55157 894 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 PKNOX1P55347 436 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 TGM3Q08188 693 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 CHAF1BQ13112 559 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 DDX39BQ13838 428 aaKnown RBP5.82□□□□□ -1.48
CNOT1-204ENST00000563130 LY6DQ14210 128 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 OCLNQ16625 522 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 TUBB8Q3ZCM7 444 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 LIPMQ5VYY2 423 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 FAM219BQ5XKK7 198 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 QSOX2Q6ZRP7 698 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 FRMD7Q6ZUT3 714 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 C10orf107Q8IVU9 208 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 ZCCHC7Q8N3Z6 543 aaKnown RBP5.82□□□□□ -1.48
CNOT1-204ENST00000563130 ACOT4Q8N9L9 421 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 OR6Y1Q8NGX8 325 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 PPP4R1Q8TF05 950 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 AGAP11Q8TF27 550 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 FAR2Q96K12 515 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 FAM111AQ96PZ2 611 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 SERINC2Q96SA4 455 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 YIPF2Q9BWQ6 316 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 SEMA4CQ9C0C4 833 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 ROGDIQ9GZN7 287 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 IQCGQ9H095 443 aaKnown RBP5.82□□□□□ -1.48
CNOT1-204ENST00000563130 STK38LQ9Y2H1 464 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 PCDHGA9Q9Y5G4 932 aaKnown RBP5.82□□□□□ -1.48
CNOT1-204ENST00000563130 ATRXP46100 2492 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 IGHV1-45A0A0A0MS14 117 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 H3BQF6 201 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 MASP2O00187 686 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 CYR61O00622 381 aa5.82□□□□□ -1.48
CNOT1-204ENST00000563130 PEX12O00623 359 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms