RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 UBQLN3Q9H347 655 aa2.5□□□□□ -2.01
HDGFL3-202ENST00000562702 HEXA-AS1Q9H8Q6 139 aa2.5□□□□□ -2.01
HDGFL3-202ENST00000562702 PDRG1Q9NUG6 133 aa2.5□□□□□ -2.01
HDGFL3-202ENST00000562702 THAP10Q9P2Z0 257 aaPredicted RBP2.5□□□□□ -2.01
HDGFL3-202ENST00000562702 NRBP1Q9UHY1 535 aa2.5□□□□□ -2.01
HDGFL3-202ENST00000562702 POMT2Q9UKY4 750 aa2.5□□□□□ -2.01
HDGFL3-202ENST00000562702 PLCL2Q9UPR0 1127 aa2.5□□□□□ -2.01
HDGFL3-202ENST00000562702 NSG2Q9Y328 171 aa2.5□□□□□ -2.01
HDGFL3-202ENST00000562702 PRDM15P57071 1507 aaPredicted RBP2.5□□□□□ -2.01
HDGFL3-202ENST00000562702 EFCAB6Q5THR3 1501 aa2.5□□□□□ -2.01
HDGFL3-202ENST00000562702 RGS12O14924 1447 aa2.5□□□□□ -2.01
HDGFL3-202ENST00000562702 ABCC5O15440 1437 aa2.5□□□□□ -2.01
HDGFL3-202ENST00000562702 ZFYVE9O95405 1425 aa2.5□□□□□ -2.01
HDGFL3-202ENST00000562702 PTPN23Q9H3S7 1636 aa2.5□□□□□ -2.01
HDGFL3-202ENST00000562702 HEG1Q9ULI3 1381 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 ADGRB3O60242 1522 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 DUOX2Q9NRD8 1548 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 XRN1Q8IZH2 1706 aaKnown RBP2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 MYH15Q9Y2K3 1946 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 PRSS46E5RG02 174 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 FAM86B1E9PN63 330 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 RNF103O00237 685 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 RTCAO00442 366 aaKnown RBP2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 PGRMC2O15173 223 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 KIF5CO60282 957 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 ECE2O60344 883 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 FAM86B2P0C5J1 330 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 TSPY3P0CV98 308 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 TSPY8P0CW00 308 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 ADORA3P0DMS8 318 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 PCP11498 1178 aaKnown RBP2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 GOT1P17174 413 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 CTNNA2P26232 953 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 GP5P40197 560 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 CD300CQ08708 224 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 TFCP2Q12800 502 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 COX10Q12887 443 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 GCKRQ14397 625 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 PSMD6Q15008 389 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 ZNF146Q15072 292 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 ZNF542PQ5EBM4 170 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 SPANXN4Q5MJ08 99 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 FAM46CQ5VWP2 391 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 C15orf52Q6ZUT6 534 aaKnown RBP2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 TRMT11Q7Z4G4 463 aaKnown RBP2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 COX8CQ7Z4L0 72 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 CATSPER3Q86XQ3 398 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 Q8NFD4 153 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 OCC1Q8TAD7 63 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 SPPL2AQ8TCT8 520 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 ZPLD1Q8TCW7 415 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 PDLIM5Q96HC4 596 aaKnown RBP2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 ERO1AQ96HE7 468 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 TSSK2Q96PF2 358 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 PCDHB18PQ96TA0 734 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 EDEM3Q9BZQ6 932 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 DPEP2Q9H4A9 486 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 LMAN1LQ9HAT1 526 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 GNB4Q9HAV0 340 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 C3orf14Q9HBI5 128 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 SATB2Q9UPW6 733 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 KLK4Q9Y5K2 254 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 LRRC9Q6ZRR7 1453 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 NOS1P29475 1434 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 ARHGAP31Q2M1Z3 1444 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 ADAMTS13Q76LX8 1427 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 AHDC1Q5TGY3 1603 aaPredicted RBP2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 UNC13BO14795 1591 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 JCADQ9P266 1359 aa2.49□□□□□ -2.01
HDGFL3-202ENST00000562702 NEDD4P46934 1319 aa2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 AFF2P51816 1311 aa2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 SHISA7A6NL88 538 aa2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 WDR46O15213 610 aaKnown RBP2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 OGTO15294 1046 aa2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 INPP4BO15327 924 aa2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 TNFSF12O43508 249 aa2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 SIX3O95343 332 aaPredicted RBP2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 MT-ND2P03891 347 aa2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 HOXD4P09016 255 aaPredicted RBP2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 FAM58BPP0C7Q3 252 aa2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 SP9P0CG40 484 aa2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 TSPY4P0CV99 314 aa2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 TSPY10P0CW01 314 aa2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 EEF2P13639 858 aaKnown RBP2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 LBPP18428 481 aa2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 ITIH1P19827 911 aa2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 IL4RP24394 825 aa2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 ETV5P41161 510 aa2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 PRKCIP41743 596 aa2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 ZFP36L2P47974 494 aaKnown RBP2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 PTENP60484 403 aa2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 SRPXP78539 464 aa2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 TCEAL6Q6IPX3 200 aa2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 PET117Q6UWS5 81 aa2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 TMEM182Q6ZP80 229 aaPredicted RBP2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 SPATA19Q7Z5L4 167 aa2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 SLC25A42Q86VD7 318 aa2.48□□□□□ -2.01
HDGFL3-202ENST00000562702 METTL23Q86XA0 190 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms