RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 MAD1L1Q9Y6D9 718 aa17.17■□□□□ 0.34
TPM1-226ENST00000560959 A0A0G2JMM0 328 aa17.16■□□□□ 0.34
TPM1-226ENST00000560959 A0A1W2PPB8 328 aa17.16■□□□□ 0.34
TPM1-226ENST00000560959 A0A1W2PRS3 328 aa17.16■□□□□ 0.34
TPM1-226ENST00000560959 KIR3DP1A8MWS1 328 aa17.16■□□□□ 0.34
TPM1-226ENST00000560959 F7P08709 466 aaPredicted RBP17.16■□□□□ 0.34
TPM1-226ENST00000560959 INHBBP09529 407 aa17.16■□□□□ 0.34
TPM1-226ENST00000560959 UQCRC1P31930 480 aa17.16■□□□□ 0.34
TPM1-226ENST00000560959 HNF4AP41235 474 aa17.16■□□□□ 0.34
TPM1-226ENST00000560959 REEP5Q00765 189 aa17.16■□□□□ 0.34
TPM1-226ENST00000560959 KEAP1Q14145 624 aa17.16■□□□□ 0.34
TPM1-226ENST00000560959 ELAVL1Q15717 326 aaKnown RBP17.16■□□□□ 0.34
TPM1-226ENST00000560959 ZNF750Q32MQ0 723 aa17.16■□□□□ 0.34
TPM1-226ENST00000560959 PAQR3Q6TCH7 311 aa17.16■□□□□ 0.34
TPM1-226ENST00000560959 C16orf47Q6ZP98 133 aaPredicted RBP17.16■□□□□ 0.34
TPM1-226ENST00000560959 TAOK1Q7L7X3 1001 aa17.16■□□□□ 0.34
TPM1-226ENST00000560959 ZNF595Q8IYB9 648 aa17.16■□□□□ 0.34
TPM1-226ENST00000560959 MORN4Q8NDC4 146 aa17.16■□□□□ 0.34
TPM1-226ENST00000560959 DAZLQ92904 295 aaKnown RBP17.16■□□□□ 0.34
TPM1-226ENST00000560959 RNASE6Q93091 150 aaKnown RBP17.16■□□□□ 0.34
TPM1-226ENST00000560959 ARSGQ96EG1 525 aa17.16■□□□□ 0.34
TPM1-226ENST00000560959 SCYL1Q96KG9 808 aa17.16■□□□□ 0.34
TPM1-226ENST00000560959 SH3GL2Q99962 352 aa17.16■□□□□ 0.34
TPM1-226ENST00000560959 SPNS1Q9H2V7 528 aa17.16■□□□□ 0.34
TPM1-226ENST00000560959 LIN28AQ9H9Z2 209 aaKnown RBP17.16■□□□□ 0.34
TPM1-226ENST00000560959 DMRT3Q9NQL9 472 aa17.16■□□□□ 0.34
TPM1-226ENST00000560959 C20orf96Q9NUD7 363 aaPredicted RBP17.16■□□□□ 0.34
TPM1-226ENST00000560959 TRGV5A0A0B4J1U4 118 aa17.15■□□□□ 0.34
TPM1-226ENST00000560959 PABPN1LA6NDY0 278 aaKnown RBP17.15■□□□□ 0.34
TPM1-226ENST00000560959 WWP2O00308 870 aa17.15■□□□□ 0.34
TPM1-226ENST00000560959 DVL2O14641 736 aa17.15■□□□□ 0.34
TPM1-226ENST00000560959 ADSLP30566 484 aaPredicted RBP17.15■□□□□ 0.34
TPM1-226ENST00000560959 KCNJ1P48048 391 aa17.15■□□□□ 0.34
TPM1-226ENST00000560959 ASCL1P50553 236 aa17.15■□□□□ 0.34
TPM1-226ENST00000560959 STXBP1P61764 594 aaKnown RBP17.15■□□□□ 0.34
TPM1-226ENST00000560959 BTN3A2P78410 334 aa17.15■□□□□ 0.34
TPM1-226ENST00000560959 TBL3Q12788 808 aaKnown RBP17.15■□□□□ 0.34
TPM1-226ENST00000560959 SNTB1Q13884 538 aaKnown RBP17.15■□□□□ 0.34
TPM1-226ENST00000560959 RUNX2Q13950 521 aa17.15■□□□□ 0.34
TPM1-226ENST00000560959 OPN5Q6U736 354 aa17.15■□□□□ 0.34
TPM1-226ENST00000560959 FAM47EQ6ZV65 393 aa17.15■□□□□ 0.34
TPM1-226ENST00000560959 FBXW8Q8N3Y1 598 aa17.15■□□□□ 0.34
TPM1-226ENST00000560959 MCUQ8NE86 351 aa17.15■□□□□ 0.34
TPM1-226ENST00000560959 OR5L2Q8NGL0 311 aa17.15■□□□□ 0.34
TPM1-226ENST00000560959 FAR2Q96K12 515 aa17.15■□□□□ 0.34
TPM1-226ENST00000560959 BAG1Q99933 345 aaPredicted RBP17.15■□□□□ 0.34
TPM1-226ENST00000560959 FAM167BQ9BTA0 163 aa17.15■□□□□ 0.34
TPM1-226ENST00000560959 XAB2Q9HCS7 855 aaKnown RBP17.15■□□□□ 0.34
TPM1-226ENST00000560959 HOMER3Q9NSC5 361 aa17.15■□□□□ 0.34
TPM1-226ENST00000560959 ZNF629Q9UEG4 869 aaPredicted RBP17.15■□□□□ 0.34
TPM1-226ENST00000560959 MRPS33Q9Y291 106 aaKnown RBP17.15■□□□□ 0.34
TPM1-226ENST00000560959 CLCA3PQ9Y6N3 262 aa17.15■□□□□ 0.34
TPM1-226ENST00000560959 NSD1Q96L73 2696 aaPredicted RBP17.15■□□□□ 0.34
TPM1-226ENST00000560959 HRNRQ86YZ3 2850 aaPredicted RBP17.14■□□□□ 0.34
TPM1-226ENST00000560959 ATP6AP2A0A1C7CYW4 349 aa17.14■□□□□ 0.33
TPM1-226ENST00000560959 ATP6AP2O75787 350 aa17.14■□□□□ 0.33
TPM1-226ENST00000560959 P04436 131 aa17.14■□□□□ 0.33
TPM1-226ENST00000560959 HEXAP06865 529 aa17.14■□□□□ 0.33
TPM1-226ENST00000560959 ENO2P09104 434 aaPredicted RBP17.14■□□□□ 0.33
TPM1-226ENST00000560959 EPXP11678 715 aa17.14■□□□□ 0.33
TPM1-226ENST00000560959 PPP2R1BP30154 601 aa17.14■□□□□ 0.33
TPM1-226ENST00000560959 HK2P52789 917 aa17.14■□□□□ 0.33
TPM1-226ENST00000560959 RAB38P57729 211 aa17.14■□□□□ 0.33
TPM1-226ENST00000560959 SLC13A2Q13183 592 aa17.14■□□□□ 0.33
TPM1-226ENST00000560959 BMPR2Q13873 1038 aa17.14■□□□□ 0.33
TPM1-226ENST00000560959 NXPE4Q6UWF7 544 aa17.14■□□□□ 0.33
TPM1-226ENST00000560959 CLEC9AQ6UXN8 241 aa17.14■□□□□ 0.33
TPM1-226ENST00000560959 SLCO2A1Q92959 643 aa17.14■□□□□ 0.33
TPM1-226ENST00000560959 GAL3ST3Q96A11 431 aa17.14■□□□□ 0.33
TPM1-226ENST00000560959 SMR3AQ99954 134 aa17.14■□□□□ 0.33
TPM1-226ENST00000560959 CNPPD1Q9BV87 410 aa17.14■□□□□ 0.33
TPM1-226ENST00000560959 AICDAQ9GZX7 198 aa17.14■□□□□ 0.33
TPM1-226ENST00000560959 PLEKHF2Q9H8W4 249 aa17.14■□□□□ 0.33
TPM1-226ENST00000560959 NEUROD4Q9HD90 331 aa17.14■□□□□ 0.33
TPM1-226ENST00000560959 ACKR4Q9NPB9 350 aa17.14■□□□□ 0.33
TPM1-226ENST00000560959 RYDENQ9NUL5 291 aaKnown RBP17.14■□□□□ 0.33
TPM1-226ENST00000560959 ALKBH4Q9NXW9 302 aa17.14■□□□□ 0.33
TPM1-226ENST00000560959 VTI1BQ9UEU0 232 aa17.14■□□□□ 0.33
TPM1-226ENST00000560959 MTRF1LQ9UGC7 380 aaKnown RBP17.14■□□□□ 0.33
TPM1-226ENST00000560959 ATG4BQ9Y4P1 393 aa17.14■□□□□ 0.33
TPM1-226ENST00000560959 A0A088AWK7 358 aa17.13■□□□□ 0.33
TPM1-226ENST00000560959 CTAGE15A4D2H0 777 aa17.13■□□□□ 0.33
TPM1-226ENST00000560959 C4orf51C9J302 202 aa17.13■□□□□ 0.33
TPM1-226ENST00000560959 G3V3Y1 287 aa17.13■□□□□ 0.33
TPM1-226ENST00000560959 TGFBR3LH3BV60 316 aa17.13■□□□□ 0.33
TPM1-226ENST00000560959 CELA3AP09093 270 aa17.13■□□□□ 0.33
TPM1-226ENST00000560959 ZNF10P21506 573 aaPredicted RBP17.13■□□□□ 0.33
TPM1-226ENST00000560959 GSTM2P28161 218 aa17.13■□□□□ 0.33
TPM1-226ENST00000560959 CEACAM8P31997 349 aaPredicted RBP17.13■□□□□ 0.33
TPM1-226ENST00000560959 IL2P60568 153 aa17.13■□□□□ 0.33
TPM1-226ENST00000560959 RBBP5Q15291 538 aaKnown RBP17.13■□□□□ 0.33
TPM1-226ENST00000560959 TOR1AIP1Q5JTV8 583 aa17.13■□□□□ 0.33
TPM1-226ENST00000560959 SHEQ5VZ18 495 aa17.13■□□□□ 0.33
TPM1-226ENST00000560959 SEM1Q6ZVN7 128 aa17.13■□□□□ 0.33
TPM1-226ENST00000560959 MAATS1Q7Z4T9 603 aa17.13■□□□□ 0.33
TPM1-226ENST00000560959 CTAGE6Q86UF2 777 aa17.13■□□□□ 0.33
TPM1-226ENST00000560959 ULK2Q8IYT8 1036 aa17.13■□□□□ 0.33
TPM1-226ENST00000560959 RELL2Q8NC24 303 aaPredicted RBP17.13■□□□□ 0.33
TPM1-226ENST00000560959 C2CD4AQ8NCU7 369 aaPredicted RBP17.13■□□□□ 0.33
TPM1-226ENST00000560959 C7orf57Q8NEG2 295 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms