RNA–Protein interactions for RNA: ENST00000560945.1

SNX22-205, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-205ENST00000560945 ASXL3Q9C0F0 2248 aa21.17■□□□□ 0.98
SNX22-205ENST00000560945 DLL1O00548 723 aa21.17■□□□□ 0.98
SNX22-205ENST00000560945 PNLIPP16233 465 aa21.17■□□□□ 0.98
SNX22-205ENST00000560945 ARFIP1P53367 373 aa21.17■□□□□ 0.98
SNX22-205ENST00000560945 LRIF1Q5T3J3 769 aa21.17■□□□□ 0.98
SNX22-205ENST00000560945 R3HCC1LQ7Z5L2 792 aaKnown RBP21.17■□□□□ 0.98
SNX22-205ENST00000560945 CLEC4FQ8N1N0 589 aa21.17■□□□□ 0.98
SNX22-205ENST00000560945 PRPF18Q99633 342 aaKnown RBP21.17■□□□□ 0.98
SNX22-205ENST00000560945 BHLHE41Q9C0J9 482 aaPredicted RBP21.17■□□□□ 0.98
SNX22-205ENST00000560945 PCDHAC1Q9H158 963 aa21.17■□□□□ 0.98
SNX22-205ENST00000560945 PIF1Q9H611 641 aa21.17■□□□□ 0.98
SNX22-205ENST00000560945 PDE7BQ9NP56 450 aa21.17■□□□□ 0.98
SNX22-205ENST00000560945 SLAMF7Q9NQ25 335 aa21.17■□□□□ 0.98
SNX22-205ENST00000560945 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.17■□□□□ 0.98
SNX22-205ENST00000560945 A0A096LPI6 279 aa21.16■□□□□ 0.98
SNX22-205ENST00000560945 AGRPO00253 132 aa21.16■□□□□ 0.98
SNX22-205ENST00000560945 RFXANKO14593 260 aa21.16■□□□□ 0.98
SNX22-205ENST00000560945 CIB2O75838 187 aa21.16■□□□□ 0.98
SNX22-205ENST00000560945 ZBTB11O95625 1053 aaPredicted RBP21.16■□□□□ 0.98
SNX22-205ENST00000560945 AIFM1O95831 613 aa21.16■□□□□ 0.98
SNX22-205ENST00000560945 RPLP0P05388 317 aaKnown RBP21.16■□□□□ 0.98
SNX22-205ENST00000560945 ALOX12P18054 663 aa21.16■□□□□ 0.98
SNX22-205ENST00000560945 TRA2BP62995 288 aaKnown RBP21.16■□□□□ 0.98
SNX22-205ENST00000560945 TGM3Q08188 693 aa21.16■□□□□ 0.98
SNX22-205ENST00000560945 SUZ12Q15022 739 aaKnown RBP21.16■□□□□ 0.98
SNX22-205ENST00000560945 PRTGQ2VWP7 1150 aa21.16■□□□□ 0.98
SNX22-205ENST00000560945 C1orf146Q5VVC0 180 aa21.16■□□□□ 0.98
SNX22-205ENST00000560945 MSANTD1Q6ZTZ1 278 aa21.16■□□□□ 0.98
SNX22-205ENST00000560945 OR5T3Q8NGG3 340 aa21.16■□□□□ 0.98
SNX22-205ENST00000560945 IFI44Q8TCB0 444 aa21.16■□□□□ 0.98
SNX22-205ENST00000560945 EXOSC8Q96B26 276 aaKnown RBP21.16■□□□□ 0.98
SNX22-205ENST00000560945 MTERF3Q96E29 417 aa21.16■□□□□ 0.98
SNX22-205ENST00000560945 ANKRD27Q96NW4 1050 aa21.16■□□□□ 0.98
SNX22-205ENST00000560945 PANX1Q96RD7 426 aa21.16■□□□□ 0.98
SNX22-205ENST00000560945 SYNDIG1Q9H7V2 258 aa21.16■□□□□ 0.98
SNX22-205ENST00000560945 RXFP3Q9NSD7 469 aa21.16■□□□□ 0.98
SNX22-205ENST00000560945 MAPRE3Q9UPY8 281 aa21.16■□□□□ 0.98
SNX22-205ENST00000560945 PRSS51A0A1B0GVH4 220 aa21.15■□□□□ 0.98
SNX22-205ENST00000560945 PGRMC2O15173 223 aa21.15■□□□□ 0.98
SNX22-205ENST00000560945 ZSCAN9O15535 394 aaPredicted RBP21.15■□□□□ 0.98
SNX22-205ENST00000560945 C6orf47O95873 294 aa21.15■□□□□ 0.98
SNX22-205ENST00000560945 NPPAP01160 153 aa21.15■□□□□ 0.98
SNX22-205ENST00000560945 ME2P23368 584 aa21.15■□□□□ 0.98
SNX22-205ENST00000560945 SOX11P35716 441 aa21.15■□□□□ 0.98
SNX22-205ENST00000560945 TSFMP43897 325 aaKnown RBP21.15■□□□□ 0.98
SNX22-205ENST00000560945 DAB2P98082 770 aa21.15■□□□□ 0.98
SNX22-205ENST00000560945 SLC14A1Q13336 389 aa21.15■□□□□ 0.98
SNX22-205ENST00000560945 HEPACAMQ14CZ8 416 aa21.15■□□□□ 0.98
SNX22-205ENST00000560945 RUNDC3AQ59EK9 446 aa21.15■□□□□ 0.98
SNX22-205ENST00000560945 PRMT9Q6P2P2 845 aa21.15■□□□□ 0.98
SNX22-205ENST00000560945 WDR74Q6RFH5 385 aaPredicted RBP21.15■□□□□ 0.98
SNX22-205ENST00000560945 ABHD13Q7L211 337 aa21.15■□□□□ 0.98
SNX22-205ENST00000560945 NET1Q7Z628 596 aaPredicted RBP21.15■□□□□ 0.98
SNX22-205ENST00000560945 C10orf111Q8N326 155 aa21.15■□□□□ 0.98
SNX22-205ENST00000560945 FAM47BQ8NA70 645 aa21.15■□□□□ 0.98
SNX22-205ENST00000560945 OR6C4Q8NGE1 309 aa21.15■□□□□ 0.98
SNX22-205ENST00000560945 CCDC115Q96NT0 180 aa21.15■□□□□ 0.98
SNX22-205ENST00000560945 SPRTNQ9H040 489 aaPredicted RBP21.15■□□□□ 0.98
SNX22-205ENST00000560945 PLCL2Q9UPR0 1127 aa21.15■□□□□ 0.98
SNX22-205ENST00000560945 NAALAD2Q9Y3Q0 740 aa21.15■□□□□ 0.98
SNX22-205ENST00000560945 GPR179Q6PRD1 2367 aa21.15■□□□□ 0.98
SNX22-205ENST00000560945 A0A1W2PS29 197 aa21.15■□□□□ 0.98
SNX22-205ENST00000560945 URADA6NGE7 173 aa21.15■□□□□ 0.98
SNX22-205ENST00000560945 MGRN1O60291 552 aa21.15■□□□□ 0.98
SNX22-205ENST00000560945 ABCB1P08183 1280 aaPredicted RBP21.15■□□□□ 0.98
SNX22-205ENST00000560945 CKMT1AP12532 417 aa21.15■□□□□ 0.98
SNX22-205ENST00000560945 GPR19Q15760 415 aa21.15■□□□□ 0.98
SNX22-205ENST00000560945 LAIR1Q6GTX8 287 aa21.15■□□□□ 0.98
SNX22-205ENST00000560945 ZNF655Q8N720 491 aaPredicted RBP21.15■□□□□ 0.98
SNX22-205ENST00000560945 C10orf90Q96M02 699 aa21.15■□□□□ 0.98
SNX22-205ENST00000560945 CSF3RQ99062 836 aa21.15■□□□□ 0.98
SNX22-205ENST00000560945 KCMF1Q9P0J7 381 aa21.15■□□□□ 0.98
SNX22-205ENST00000560945 BTNL2Q9UIR0 455 aa21.15■□□□□ 0.98
SNX22-205ENST00000560945 DNAJA2O60884 412 aa21.14■□□□□ 0.97
SNX22-205ENST00000560945 ERN1O75460 977 aaKnown RBP21.14■□□□□ 0.97
SNX22-205ENST00000560945 ANP32DO95626 131 aa21.14■□□□□ 0.97
SNX22-205ENST00000560945 RPL3P39023 403 aaKnown RBP21.14■□□□□ 0.97
SNX22-205ENST00000560945 RP1P56715 2156 aa21.14■□□□□ 0.97
SNX22-205ENST00000560945 GAB1Q13480 694 aa21.14■□□□□ 0.97
SNX22-205ENST00000560945 ZNF750Q32MQ0 723 aa21.14■□□□□ 0.97
SNX22-205ENST00000560945 SAMD4BQ5PRF9 694 aaKnown RBP21.14■□□□□ 0.97
SNX22-205ENST00000560945 IFNEQ86WN2 208 aa21.14■□□□□ 0.97
SNX22-205ENST00000560945 SUMF1Q8NBK3 374 aa21.14■□□□□ 0.97
SNX22-205ENST00000560945 HIPK4Q8NE63 616 aa21.14■□□□□ 0.97
SNX22-205ENST00000560945 ZNF285Q96NJ3 590 aa21.14■□□□□ 0.97
SNX22-205ENST00000560945 SERINC2Q96SA4 455 aa21.14■□□□□ 0.97
SNX22-205ENST00000560945 CPPED1Q9BRF8 314 aaPredicted RBP21.14■□□□□ 0.97
SNX22-205ENST00000560945 ATAD3AQ9NVI7 634 aa21.14■□□□□ 0.97
SNX22-205ENST00000560945 SEMA5BQ9P283 1151 aa21.14■□□□□ 0.97
SNX22-205ENST00000560945 L3MBTL1Q9Y468 752 aa21.14■□□□□ 0.97
SNX22-205ENST00000560945 CACNA1HO95180 2353 aa21.14■□□□□ 0.97
SNX22-205ENST00000560945 SCN3AQ9NY46 2000 aa21.14■□□□□ 0.97
SNX22-205ENST00000560945 SGK494L7N484 410 aa21.13■□□□□ 0.97
SNX22-205ENST00000560945 RNASET2O00584 256 aaKnown RBP21.13■□□□□ 0.97
SNX22-205ENST00000560945 PROM1O43490 865 aa21.13■□□□□ 0.97
SNX22-205ENST00000560945 SRPX2O60687 465 aaPredicted RBP21.13■□□□□ 0.97
SNX22-205ENST00000560945 GALR3O60755 368 aaPredicted RBP21.13■□□□□ 0.97
SNX22-205ENST00000560945 FOLR1P15328 257 aa21.13■□□□□ 0.97
SNX22-205ENST00000560945 GSK3BP49841 420 aa21.13■□□□□ 0.97
SNX22-205ENST00000560945 LIM2P55344 173 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms