RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 PPIEQ9UNP9 301 aaKnown RBP9.19□□□□□ -0.94
TPM1-225ENST00000560679 CRYL1Q9Y2S2 319 aa9.19□□□□□ -0.94
TPM1-225ENST00000560679 A8MVJ9 347 aa9.18□□□□□ -0.94
TPM1-225ENST00000560679 H3BMM5 538 aa9.18□□□□□ -0.94
TPM1-225ENST00000560679 H7C1Q1 480 aa9.18□□□□□ -0.94
TPM1-225ENST00000560679 NDUFS4O43181 175 aa9.18□□□□□ -0.94
TPM1-225ENST00000560679 OR2J2O76002 312 aa9.18□□□□□ -0.94
TPM1-225ENST00000560679 ZNF888P0CJ79 500 aaPredicted RBP9.18□□□□□ -0.94
TPM1-225ENST00000560679 ALOX12P18054 663 aa9.18□□□□□ -0.94
TPM1-225ENST00000560679 CHRM3P20309 590 aa9.18□□□□□ -0.94
TPM1-225ENST00000560679 BMP5P22003 454 aa9.18□□□□□ -0.94
TPM1-225ENST00000560679 PPP2R1BP30154 601 aa9.18□□□□□ -0.94
TPM1-225ENST00000560679 FDFT1P37268 417 aa9.18□□□□□ -0.94
TPM1-225ENST00000560679 PEX19P40855 299 aa9.18□□□□□ -0.94
TPM1-225ENST00000560679 SOX3P41225 446 aa9.18□□□□□ -0.94
TPM1-225ENST00000560679 GPR143P51810 404 aa9.18□□□□□ -0.94
TPM1-225ENST00000560679 WNT3P56703 355 aa9.18□□□□□ -0.94
TPM1-225ENST00000560679 SESN2P58004 480 aaPredicted RBP9.18□□□□□ -0.94
TPM1-225ENST00000560679 MEF2AQ02078 507 aaPredicted RBP9.18□□□□□ -0.94
TPM1-225ENST00000560679 FOXO1Q12778 655 aa9.18□□□□□ -0.94
TPM1-225ENST00000560679 OASLQ15646 514 aaKnown RBP9.18□□□□□ -0.94
TPM1-225ENST00000560679 PCID2Q5JVF3 399 aa9.18□□□□□ -0.94
TPM1-225ENST00000560679 Q5PR19 223 aa9.18□□□□□ -0.94
TPM1-225ENST00000560679 RNF187Q5TA31 235 aaPredicted RBP9.18□□□□□ -0.94
TPM1-225ENST00000560679 SHEQ5VZ18 495 aa9.18□□□□□ -0.94
TPM1-225ENST00000560679 TTC27Q6P3X3 843 aa9.18□□□□□ -0.94
TPM1-225ENST00000560679 POMZP3Q6PJE2 187 aa9.18□□□□□ -0.94
TPM1-225ENST00000560679 CYHR1Q6ZMK1 362 aa9.18□□□□□ -0.94
TPM1-225ENST00000560679 RGS9BPQ6ZS82 235 aa9.18□□□□□ -0.94
TPM1-225ENST00000560679 ZNF771Q7L3S4 317 aaPredicted RBP9.18□□□□□ -0.94
TPM1-225ENST00000560679 OTUD6BQ8N6M0 293 aa9.18□□□□□ -0.94
TPM1-225ENST00000560679 NCLNQ969V3 563 aa9.18□□□□□ -0.94
TPM1-225ENST00000560679 MFSD3Q96ES6 412 aa9.18□□□□□ -0.94
TPM1-225ENST00000560679 ZIM3Q96PE6 472 aa9.18□□□□□ -0.94
TPM1-225ENST00000560679 AARSD1Q9BTE6 412 aaKnown RBP9.18□□□□□ -0.94
TPM1-225ENST00000560679 FAM129AQ9BZQ8 928 aa9.18□□□□□ -0.94
TPM1-225ENST00000560679 KIAA1549Q9HCM3 1950 aa9.18□□□□□ -0.94
TPM1-225ENST00000560679 PRDM9Q9NQV7 894 aa9.18□□□□□ -0.94
TPM1-225ENST00000560679 BEX4Q9NWD9 120 aaPredicted RBP9.18□□□□□ -0.94
TPM1-225ENST00000560679 HPF1Q9NWY4 346 aa9.18□□□□□ -0.94
TPM1-225ENST00000560679 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.18□□□□□ -0.94
TPM1-225ENST00000560679 ERVK-11Q9UQG0 969 aa9.18□□□□□ -0.94
TPM1-225ENST00000560679 DRG1Q9Y295 367 aaKnown RBP9.18□□□□□ -0.94
TPM1-225ENST00000560679 CLDN16Q9Y5I7 305 aa9.18□□□□□ -0.94
TPM1-225ENST00000560679 SUSD5O60279 629 aa9.17□□□□□ -0.94
TPM1-225ENST00000560679 ZNF354AO60765 605 aaPredicted RBP9.17□□□□□ -0.94
TPM1-225ENST00000560679 VAPBO95292 243 aa9.17□□□□□ -0.94
TPM1-225ENST00000560679 HRGP04196 525 aa9.17□□□□□ -0.94
TPM1-225ENST00000560679 APRTP07741 180 aa9.17□□□□□ -0.94
TPM1-225ENST00000560679 EPXP11678 715 aa9.17□□□□□ -0.94
TPM1-225ENST00000560679 ETS1P14921 441 aa9.17□□□□□ -0.94
TPM1-225ENST00000560679 CETN2P41208 172 aa9.17□□□□□ -0.94
TPM1-225ENST00000560679 DNASE1L1P49184 302 aa9.17□□□□□ -0.94
TPM1-225ENST00000560679 MAN2A2P49641 1150 aa9.17□□□□□ -0.94
TPM1-225ENST00000560679 GYS2P54840 703 aa9.17□□□□□ -0.94
TPM1-225ENST00000560679 HYAL4Q2M3T9 481 aa9.17□□□□□ -0.94
TPM1-225ENST00000560679 WLSQ5T9L3 541 aa9.17□□□□□ -0.94
TPM1-225ENST00000560679 NDUFAF5Q5TEU4 345 aa9.17□□□□□ -0.94
TPM1-225ENST00000560679 CCDC137Q6PK04 289 aaKnown RBP9.17□□□□□ -0.94
TPM1-225ENST00000560679 IL20RBQ6UXL0 311 aa9.17□□□□□ -0.94
TPM1-225ENST00000560679 GK5Q6ZS86 529 aa9.17□□□□□ -0.94
TPM1-225ENST00000560679 CENPUQ71F23 418 aa9.17□□□□□ -0.94
TPM1-225ENST00000560679 PIWIL4Q7Z3Z4 852 aaKnown RBP9.17□□□□□ -0.94
TPM1-225ENST00000560679 C17orf64Q86WR6 236 aa9.17□□□□□ -0.94
TPM1-225ENST00000560679 SCUBE1Q8IWY4 988 aa9.17□□□□□ -0.94
TPM1-225ENST00000560679 GPALPP1Q8IXQ4 340 aa9.17□□□□□ -0.94
TPM1-225ENST00000560679 NT5CQ8TCD5 201 aa9.17□□□□□ -0.94
TPM1-225ENST00000560679 SREK1Q8WXA9 508 aaKnown RBP9.17□□□□□ -0.94
TPM1-225ENST00000560679 KIAA1191Q96A73 305 aa9.17□□□□□ -0.94
TPM1-225ENST00000560679 VMP1Q96GC9 406 aa9.17□□□□□ -0.94
TPM1-225ENST00000560679 SCYL1Q96KG9 808 aa9.17□□□□□ -0.94
TPM1-225ENST00000560679 RASL10BQ96S79 203 aa9.17□□□□□ -0.94
TPM1-225ENST00000560679 FAM173AQ9BQD7 235 aa9.17□□□□□ -0.94
TPM1-225ENST00000560679 SGPP1Q9BX95 441 aa9.17□□□□□ -0.94
TPM1-225ENST00000560679 AICDAQ9GZX7 198 aa9.17□□□□□ -0.94
TPM1-225ENST00000560679 SPNS1Q9H2V7 528 aa9.17□□□□□ -0.94
TPM1-225ENST00000560679 IL1RL2Q9HB29 575 aa9.17□□□□□ -0.94
TPM1-225ENST00000560679 SEMA4BQ9NPR2 832 aaPredicted RBP9.17□□□□□ -0.94
TPM1-225ENST00000560679 RAB6BQ9NRW1 208 aa9.17□□□□□ -0.94
TPM1-225ENST00000560679 ZDHHC18Q9NUE0 388 aa9.17□□□□□ -0.94
TPM1-225ENST00000560679 ZFATQ9P243 1243 aa9.17□□□□□ -0.94
TPM1-225ENST00000560679 ACAD8Q9UKU7 415 aa9.17□□□□□ -0.94
TPM1-225ENST00000560679 YARS2Q9Y2Z4 477 aaKnown RBP9.17□□□□□ -0.94
TPM1-225ENST00000560679 SONP18583 2426 aaKnown RBP9.16□□□□□ -0.94
TPM1-225ENST00000560679 ATP6AP2A0A1C7CYW4 349 aa9.16□□□□□ -0.94
TPM1-225ENST00000560679 CLCA1A8K7I4 914 aa9.16□□□□□ -0.94
TPM1-225ENST00000560679 HSPB2A8KAH6 182 aa9.16□□□□□ -0.94
TPM1-225ENST00000560679 FAM47E-STBD1D6RA91 191 aa9.16□□□□□ -0.94
TPM1-225ENST00000560679 E5RI56 91 aa9.16□□□□□ -0.94
TPM1-225ENST00000560679 E7EVH7 732 aa9.16□□□□□ -0.94
TPM1-225ENST00000560679 LIASO43766 372 aa9.16□□□□□ -0.94
TPM1-225ENST00000560679 ATP6AP2O75787 350 aa9.16□□□□□ -0.94
TPM1-225ENST00000560679 IFNB1P01574 187 aa9.16□□□□□ -0.94
TPM1-225ENST00000560679 MPC1LP0DKB6 136 aa9.16□□□□□ -0.94
TPM1-225ENST00000560679 CCL3P10147 92 aa9.16□□□□□ -0.94
TPM1-225ENST00000560679 OGNP20774 298 aaKnown RBP9.16□□□□□ -0.94
TPM1-225ENST00000560679 HSD17B3P37058 310 aa9.16□□□□□ -0.94
TPM1-225ENST00000560679 HNRNPFP52597 415 aaKnown RBP9.16□□□□□ -0.94
TPM1-225ENST00000560679 PWP1Q13610 501 aa9.16□□□□□ -0.94
TPM1-225ENST00000560679 HSPB2Q16082 182 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms