RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 FBXW2Q9UKT8 454 aa12.17□□□□□ -0.46
CTDSPL2-209ENST00000560620 MMACHCQ9Y4U1 282 aa12.17□□□□□ -0.46
CTDSPL2-209ENST00000560620 MYOCOSA0A1B0GUC4 107 aa12.16□□□□□ -0.46
CTDSPL2-209ENST00000560620 TCRBV16S1A1N1A0A5B0 115 aa12.16□□□□□ -0.46
CTDSPL2-209ENST00000560620 H0YIV9 168 aa12.16□□□□□ -0.46
CTDSPL2-209ENST00000560620 OR7A17O14581 309 aa12.16□□□□□ -0.46
CTDSPL2-209ENST00000560620 MYO1DO94832 1006 aa12.16□□□□□ -0.46
CTDSPL2-209ENST00000560620 SUPT7LO94864 414 aa12.16□□□□□ -0.46
CTDSPL2-209ENST00000560620 WDPCPO95876 746 aa12.16□□□□□ -0.46
CTDSPL2-209ENST00000560620 SHBGP04278 402 aa12.16□□□□□ -0.46
CTDSPL2-209ENST00000560620 TSPAN8P19075 237 aa12.16□□□□□ -0.46
CTDSPL2-209ENST00000560620 HIST1H1TP22492 207 aaPredicted RBP12.16□□□□□ -0.46
CTDSPL2-209ENST00000560620 CPN2P22792 545 aa12.16□□□□□ -0.46
CTDSPL2-209ENST00000560620 PTX3P26022 381 aaPredicted RBP12.16□□□□□ -0.46
CTDSPL2-209ENST00000560620 TNFRSF8P28908 595 aa12.16□□□□□ -0.46
CTDSPL2-209ENST00000560620 SOX11P35716 441 aa12.16□□□□□ -0.46
CTDSPL2-209ENST00000560620 ST13P50502 369 aaKnown RBP12.16□□□□□ -0.46
CTDSPL2-209ENST00000560620 NEK2P51955 445 aa12.16□□□□□ -0.46
CTDSPL2-209ENST00000560620 CDH13P55290 713 aa12.16□□□□□ -0.46
CTDSPL2-209ENST00000560620 HSD17B7P56937 341 aa12.16□□□□□ -0.46
CTDSPL2-209ENST00000560620 STX4Q12846 297 aa12.16□□□□□ -0.46
CTDSPL2-209ENST00000560620 IFT88Q13099 833 aa12.16□□□□□ -0.46
CTDSPL2-209ENST00000560620 SLAMF1Q13291 335 aa12.16□□□□□ -0.46
CTDSPL2-209ENST00000560620 SGO1Q5FBB7 561 aa12.16□□□□□ -0.46
CTDSPL2-209ENST00000560620 ACER2Q5QJU3 275 aa12.16□□□□□ -0.46
CTDSPL2-209ENST00000560620 ZNF793Q6ZN11 406 aa12.16□□□□□ -0.46
CTDSPL2-209ENST00000560620 UBE3DQ7Z6J8 389 aa12.16□□□□□ -0.46
CTDSPL2-209ENST00000560620 MILR1Q7Z6M3 343 aa12.16□□□□□ -0.46
CTDSPL2-209ENST00000560620 LCA5Q86VQ0 697 aa12.16□□□□□ -0.46
CTDSPL2-209ENST00000560620 ZNF595Q8IYB9 648 aa12.16□□□□□ -0.46
CTDSPL2-209ENST00000560620 L3MBTL4Q8NA19 623 aa12.16□□□□□ -0.46
CTDSPL2-209ENST00000560620 TMEM52Q8NDY8 209 aa12.16□□□□□ -0.46
CTDSPL2-209ENST00000560620 ACMSDQ8TDX5 336 aa12.16□□□□□ -0.46
CTDSPL2-209ENST00000560620 CSF3RQ99062 836 aa12.16□□□□□ -0.46
CTDSPL2-209ENST00000560620 MAPKAP1Q9BPZ7 522 aa12.16□□□□□ -0.46
CTDSPL2-209ENST00000560620 SORBS1Q9BX66 1292 aaKnown RBP12.16□□□□□ -0.46
CTDSPL2-209ENST00000560620 EPB41L4BQ9H329 900 aa12.16□□□□□ -0.46
CTDSPL2-209ENST00000560620 ANKZF1Q9H8Y5 726 aa12.16□□□□□ -0.46
CTDSPL2-209ENST00000560620 LYRM4Q9HD34 91 aa12.16□□□□□ -0.46
CTDSPL2-209ENST00000560620 MMP25Q9NPA2 562 aa12.16□□□□□ -0.46
CTDSPL2-209ENST00000560620 AGPAT4Q9NRZ5 378 aa12.16□□□□□ -0.46
CTDSPL2-209ENST00000560620 ASF1BQ9NVP2 202 aa12.16□□□□□ -0.46
CTDSPL2-209ENST00000560620 TRAV17A0A0B4J275 112 aa12.15□□□□□ -0.46
CTDSPL2-209ENST00000560620 A0A1W2PPM1 405 aa12.15□□□□□ -0.46
CTDSPL2-209ENST00000560620 TLDC2A0PJX2 215 aa12.15□□□□□ -0.46
CTDSPL2-209ENST00000560620 SAGE2PA6NJ88 616 aa12.15□□□□□ -0.46
CTDSPL2-209ENST00000560620 PLPP1O14494 284 aa12.15□□□□□ -0.46
CTDSPL2-209ENST00000560620 ZNF500O60304 480 aaPredicted RBP12.15□□□□□ -0.46
CTDSPL2-209ENST00000560620 SLU7O95391 586 aaKnown RBP12.15□□□□□ -0.46
CTDSPL2-209ENST00000560620 OTCP00480 354 aa12.15□□□□□ -0.46
CTDSPL2-209ENST00000560620 GSTA1P08263 222 aa12.15□□□□□ -0.46
CTDSPL2-209ENST00000560620 TNNI3P19429 210 aa12.15□□□□□ -0.46
CTDSPL2-209ENST00000560620 GNLYP22749 145 aa12.15□□□□□ -0.46
CTDSPL2-209ENST00000560620 HNRNPFP52597 415 aaKnown RBP12.15□□□□□ -0.46
CTDSPL2-209ENST00000560620 OC90Q02509 493 aaPredicted RBP12.15□□□□□ -0.46
CTDSPL2-209ENST00000560620 IFFO1Q0D2I5 559 aa12.15□□□□□ -0.46
CTDSPL2-209ENST00000560620 ELOAQ14241 798 aaKnown RBP12.15□□□□□ -0.46
CTDSPL2-209ENST00000560620 MEP1AQ16819 746 aa12.15□□□□□ -0.46
CTDSPL2-209ENST00000560620 CYP20A1Q6UW02 462 aa12.15□□□□□ -0.46
CTDSPL2-209ENST00000560620 FAM180AQ6UWF9 173 aa12.15□□□□□ -0.46
CTDSPL2-209ENST00000560620 CRLF3Q8IUI8 442 aa12.15□□□□□ -0.46
CTDSPL2-209ENST00000560620 BEST3Q8N1M1 668 aa12.15□□□□□ -0.46
CTDSPL2-209ENST00000560620 KIF2BQ8N4N8 673 aa12.15□□□□□ -0.46
CTDSPL2-209ENST00000560620 CCDC63Q8NA47 563 aa12.15□□□□□ -0.46
CTDSPL2-209ENST00000560620 GALNT11Q8NCW6 608 aa12.15□□□□□ -0.46
CTDSPL2-209ENST00000560620 OR4F6Q8NGB9 312 aa12.15□□□□□ -0.46
CTDSPL2-209ENST00000560620 EPS8L3Q8TE67 593 aaKnown RBP12.15□□□□□ -0.46
CTDSPL2-209ENST00000560620 TRPC4APQ8TEL6 797 aa12.15□□□□□ -0.46
CTDSPL2-209ENST00000560620 HAS2Q92819 552 aa12.15□□□□□ -0.46
CTDSPL2-209ENST00000560620 ELOVL6Q9H5J4 265 aa12.15□□□□□ -0.46
CTDSPL2-209ENST00000560620 PPCSQ9HAB8 311 aa12.15□□□□□ -0.46
CTDSPL2-209ENST00000560620 ZBTB26Q9HCK0 441 aa12.15□□□□□ -0.46
CTDSPL2-209ENST00000560620 ANKRD10Q9NXR5 420 aa12.15□□□□□ -0.46
CTDSPL2-209ENST00000560620 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.15□□□□□ -0.46
CTDSPL2-209ENST00000560620 DCDC2Q9UHG0 476 aa12.15□□□□□ -0.46
CTDSPL2-209ENST00000560620 PCDHGA10Q9Y5H3 936 aa12.15□□□□□ -0.46
CTDSPL2-209ENST00000560620 CLCA3PQ9Y6N3 262 aa12.15□□□□□ -0.46
CTDSPL2-209ENST00000560620 V9GYY5 206 aaPredicted RBP12.15□□□□□ -0.46
CTDSPL2-209ENST00000560620 TENM4Q6N022 2769 aa12.15□□□□□ -0.46
CTDSPL2-209ENST00000560620 IGKV3D-11A0A0A0MRZ8 115 aa12.14□□□□□ -0.47
CTDSPL2-209ENST00000560620 OR5H15A6NDH6 313 aa12.14□□□□□ -0.47
CTDSPL2-209ENST00000560620 FOXO6A8MYZ6 492 aa12.14□□□□□ -0.47
CTDSPL2-209ENST00000560620 ESPNB1AK53 854 aa12.14□□□□□ -0.47
CTDSPL2-209ENST00000560620 CYR61O00622 381 aa12.14□□□□□ -0.47
CTDSPL2-209ENST00000560620 LDB3O75112 727 aa12.14□□□□□ -0.47
CTDSPL2-209ENST00000560620 RPS17P08708 135 aaKnown RBP12.14□□□□□ -0.47
CTDSPL2-209ENST00000560620 SBK3P0C264 359 aa12.14□□□□□ -0.47
CTDSPL2-209ENST00000560620 ATP5F1P24539 256 aaPredicted RBP12.14□□□□□ -0.47
CTDSPL2-209ENST00000560620 PPP2R1BP30154 601 aa12.14□□□□□ -0.47
CTDSPL2-209ENST00000560620 TLX1P31314 330 aaPredicted RBP12.14□□□□□ -0.47
CTDSPL2-209ENST00000560620 TSFMP43897 325 aaKnown RBP12.14□□□□□ -0.47
CTDSPL2-209ENST00000560620 UQCRFS1P47985 274 aa12.14□□□□□ -0.47
CTDSPL2-209ENST00000560620 CCT5P48643 541 aa12.14□□□□□ -0.47
CTDSPL2-209ENST00000560620 TNFSF10P50591 281 aa12.14□□□□□ -0.47
CTDSPL2-209ENST00000560620 VSNL1P62760 191 aa12.14□□□□□ -0.47
CTDSPL2-209ENST00000560620 HERVK_113P63132 956 aa12.14□□□□□ -0.47
CTDSPL2-209ENST00000560620 NR6A1Q15406 480 aa12.14□□□□□ -0.47
CTDSPL2-209ENST00000560620 FRG2Q64ET8 278 aa12.14□□□□□ -0.47
CTDSPL2-209ENST00000560620 SLC22A9Q8IVM8 553 aa12.14□□□□□ -0.47
CTDSPL2-209ENST00000560620 SCUBE1Q8IWY4 988 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms