RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 FHP07954 510 aa13.2□□□□□ -0.3
PKNOX1-209ENST00000560448 NEFHP12036 1026 aa13.2□□□□□ -0.3
PKNOX1-209ENST00000560448 HIST1H1TP22492 207 aaPredicted RBP13.2□□□□□ -0.3
PKNOX1-209ENST00000560448 PLA2G16P53816 162 aa13.2□□□□□ -0.3
PKNOX1-209ENST00000560448 STX3Q13277 289 aa13.2□□□□□ -0.3
PKNOX1-209ENST00000560448 DDX39BQ13838 428 aaKnown RBP13.2□□□□□ -0.3
PKNOX1-209ENST00000560448 SPRED3Q2MJR0 410 aa13.2□□□□□ -0.3
PKNOX1-209ENST00000560448 GALNTL6Q49A17 601 aa13.2□□□□□ -0.3
PKNOX1-209ENST00000560448 OR4C11Q6IEV9 310 aa13.2□□□□□ -0.3
PKNOX1-209ENST00000560448 QSOX2Q6ZRP7 698 aa13.2□□□□□ -0.3
PKNOX1-209ENST00000560448 RNF165Q6ZSG1 346 aa13.2□□□□□ -0.3
PKNOX1-209ENST00000560448 PAGE2Q7Z2X7 111 aa13.2□□□□□ -0.3
PKNOX1-209ENST00000560448 C10orf107Q8IVU9 208 aa13.2□□□□□ -0.3
PKNOX1-209ENST00000560448 DTWD1Q8N5C7 304 aa13.2□□□□□ -0.3
PKNOX1-209ENST00000560448 CLEC1AQ8NC01 280 aa13.2□□□□□ -0.3
PKNOX1-209ENST00000560448 PLPP5Q8NEB5 264 aa13.2□□□□□ -0.3
PKNOX1-209ENST00000560448 RFWD2Q8NHY2 731 aa13.2□□□□□ -0.3
PKNOX1-209ENST00000560448 METTL6Q8TCB7 284 aa13.2□□□□□ -0.3
PKNOX1-209ENST00000560448 SELENOMQ8WWX9 145 aa13.2□□□□□ -0.3
PKNOX1-209ENST00000560448 THOC1Q96FV9 657 aaKnown RBP13.2□□□□□ -0.3
PKNOX1-209ENST00000560448 F2RL3Q96RI0 385 aa13.2□□□□□ -0.3
PKNOX1-209ENST00000560448 C20orf27Q9GZN8 174 aa13.2□□□□□ -0.3
PKNOX1-209ENST00000560448 AICDAQ9GZX7 198 aa13.2□□□□□ -0.3
PKNOX1-209ENST00000560448 KLHL31Q9H511 634 aa13.2□□□□□ -0.3
PKNOX1-209ENST00000560448 KCNK13Q9HB14 408 aa13.2□□□□□ -0.3
PKNOX1-209ENST00000560448 MID1IP1Q9NPA3 183 aa13.2□□□□□ -0.3
PKNOX1-209ENST00000560448 PRDM7Q9NQW5 492 aa13.2□□□□□ -0.3
PKNOX1-209ENST00000560448 HCN3Q9P1Z3 774 aa13.2□□□□□ -0.3
PKNOX1-209ENST00000560448 MKL2Q9ULH7 1088 aa13.2□□□□□ -0.3
PKNOX1-209ENST00000560448 DAPP1Q9UN19 280 aa13.2□□□□□ -0.3
PKNOX1-209ENST00000560448 USH1CQ9Y6N9 552 aa13.2□□□□□ -0.3
PKNOX1-209ENST00000560448 ZZEF1O43149 2961 aa13.19□□□□□ -0.3
PKNOX1-209ENST00000560448 ANKRD65E5RJM6 399 aa13.19□□□□□ -0.3
PKNOX1-209ENST00000560448 OR4F21O95013 312 aa13.19□□□□□ -0.3
PKNOX1-209ENST00000560448 SERPINE1P05121 402 aa13.19□□□□□ -0.3
PKNOX1-209ENST00000560448 C8orf89P0DMQ9 161 aa13.19□□□□□ -0.3
PKNOX1-209ENST00000560448 TROVE2P10155 538 aaKnown RBP eCLIP13.19□□□□□ -0.3
PKNOX1-209ENST00000560448 ICAM2P13598 275 aa13.19□□□□□ -0.3
PKNOX1-209ENST00000560448 ACPPP15309 386 aa13.19□□□□□ -0.3
PKNOX1-209ENST00000560448 OTX2P32243 289 aa13.19□□□□□ -0.3
PKNOX1-209ENST00000560448 SSR2P43308 183 aa13.19□□□□□ -0.3
PKNOX1-209ENST00000560448 HSD17B7P56937 341 aa13.19□□□□□ -0.3
PKNOX1-209ENST00000560448 SOX8P57073 446 aa13.19□□□□□ -0.3
PKNOX1-209ENST00000560448 RAB38P57729 211 aa13.19□□□□□ -0.3
PKNOX1-209ENST00000560448 RPS13P62277 151 aaKnown RBP13.19□□□□□ -0.3
PKNOX1-209ENST00000560448 MAT1AQ00266 395 aaKnown RBP13.19□□□□□ -0.3
PKNOX1-209ENST00000560448 BIKQ13323 160 aa13.19□□□□□ -0.3
PKNOX1-209ENST00000560448 TBR1Q16650 682 aa13.19□□□□□ -0.3
PKNOX1-209ENST00000560448 DEFB109BQ30KR1 87 aa13.19□□□□□ -0.3
PKNOX1-209ENST00000560448 MINDY4Q4G0A6 757 aa13.19□□□□□ -0.3
PKNOX1-209ENST00000560448 ADNP2Q6IQ32 1131 aa13.19□□□□□ -0.3
PKNOX1-209ENST00000560448 TMEM205Q6UW68 189 aa13.19□□□□□ -0.3
PKNOX1-209ENST00000560448 PPP1R32Q7Z5V6 425 aa13.19□□□□□ -0.3
PKNOX1-209ENST00000560448 NUDT13Q86X67 352 aa13.19□□□□□ -0.3
PKNOX1-209ENST00000560448 ZNF595Q8IYB9 648 aa13.19□□□□□ -0.3
PKNOX1-209ENST00000560448 CA13Q8N1Q1 262 aa13.19□□□□□ -0.3
PKNOX1-209ENST00000560448 PEX11GQ96HA9 241 aa13.19□□□□□ -0.3
PKNOX1-209ENST00000560448 METTL2AQ96IZ6 378 aaKnown RBP13.19□□□□□ -0.3
PKNOX1-209ENST00000560448 DDX31Q9H8H2 851 aaKnown RBP13.19□□□□□ -0.3
PKNOX1-209ENST00000560448 ZNF395Q9H8N7 513 aaPredicted RBP13.19□□□□□ -0.3
PKNOX1-209ENST00000560448 NPHS2Q9NP85 383 aa13.19□□□□□ -0.3
PKNOX1-209ENST00000560448 PRDM9Q9NQV7 894 aa13.19□□□□□ -0.3
PKNOX1-209ENST00000560448 ACSS2Q9NR19 701 aa13.19□□□□□ -0.3
PKNOX1-209ENST00000560448 RIC8BQ9NVN3 520 aa13.19□□□□□ -0.3
PKNOX1-209ENST00000560448 THAP1Q9NVV9 213 aa13.19□□□□□ -0.3
PKNOX1-209ENST00000560448 P4HTMQ9NXG6 502 aa13.19□□□□□ -0.3
PKNOX1-209ENST00000560448 PHF11Q9UIL8 331 aa13.19□□□□□ -0.3
PKNOX1-209ENST00000560448 ZNF225Q9UK10 706 aa13.19□□□□□ -0.3
PKNOX1-209ENST00000560448 PCDHGB7Q9Y5F8 929 aa13.19□□□□□ -0.3
PKNOX1-209ENST00000560448 HS3ST3B1Q9Y662 390 aa13.19□□□□□ -0.3
PKNOX1-209ENST00000560448 PLPP1O14494 284 aa13.18□□□□□ -0.3
PKNOX1-209ENST00000560448 SOCS6O14544 535 aa13.18□□□□□ -0.3
PKNOX1-209ENST00000560448 FFAR3O14843 346 aa13.18□□□□□ -0.3
PKNOX1-209ENST00000560448 GPR42O15529 346 aa13.18□□□□□ -0.3
PKNOX1-209ENST00000560448 ALOX12BO75342 701 aa13.18□□□□□ -0.3
PKNOX1-209ENST00000560448 GUCY1B2O75343 617 aa13.18□□□□□ -0.3
PKNOX1-209ENST00000560448 CRCPO75575 148 aa13.18□□□□□ -0.3
PKNOX1-209ENST00000560448 HPP00738 406 aa13.18□□□□□ -0.3
PKNOX1-209ENST00000560448 FURINP09958 794 aa13.18□□□□□ -0.3
PKNOX1-209ENST00000560448 UROSP10746 265 aa13.18□□□□□ -0.3
PKNOX1-209ENST00000560448 GRK2P25098 689 aa13.18□□□□□ -0.3
PKNOX1-209ENST00000560448 ATP5A1P25705 553 aaKnown RBP13.18□□□□□ -0.3
PKNOX1-209ENST00000560448 PPP2R1BP30154 601 aa13.18□□□□□ -0.3
PKNOX1-209ENST00000560448 GSTM5P46439 218 aa13.18□□□□□ -0.3
PKNOX1-209ENST00000560448 AIMP2Q13155 320 aaKnown RBP13.18□□□□□ -0.3
PKNOX1-209ENST00000560448 SYT16Q17RD7 645 aa13.18□□□□□ -0.3
PKNOX1-209ENST00000560448 DCAF10Q5QP82 559 aa13.18□□□□□ -0.3
PKNOX1-209ENST00000560448 ATG14Q6ZNE5 492 aa13.18□□□□□ -0.3
PKNOX1-209ENST00000560448 ZCCHC23Q6ZST2 131 aa13.18□□□□□ -0.3
PKNOX1-209ENST00000560448 HPS6Q86YV9 775 aa13.18□□□□□ -0.3
PKNOX1-209ENST00000560448 FITM2Q8N6M3 262 aa13.18□□□□□ -0.3
PKNOX1-209ENST00000560448 CDYL2Q8N8U2 506 aa13.18□□□□□ -0.3
PKNOX1-209ENST00000560448 ACOT4Q8N9L9 421 aa13.18□□□□□ -0.3
PKNOX1-209ENST00000560448 CRELD1Q96HD1 420 aa13.18□□□□□ -0.3
PKNOX1-209ENST00000560448 CCT7Q99832 543 aa13.18□□□□□ -0.3
PKNOX1-209ENST00000560448 GATA5Q9BWX5 397 aaPredicted RBP13.18□□□□□ -0.3
PKNOX1-209ENST00000560448 TRIM55Q9BYV6 548 aa13.18□□□□□ -0.3
PKNOX1-209ENST00000560448 VN1R1Q9GZP7 353 aa13.18□□□□□ -0.3
PKNOX1-209ENST00000560448 ING2Q9H160 280 aa13.18□□□□□ -0.3
PKNOX1-209ENST00000560448 OR51B5Q9H339 312 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms