RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 PPIEQ9UNP9 301 aaKnown RBP13.17□□□□□ -0.3
TPM1-223ENST00000560445 TNPO3Q9Y5L0 923 aaKnown RBP13.17□□□□□ -0.3
TPM1-223ENST00000560445 IKBKGQ9Y6K9 419 aa13.17□□□□□ -0.3
TPM1-223ENST00000560445 CENPEQ02224 2701 aa13.16□□□□□ -0.3
TPM1-223ENST00000560445 CYSRT1A8MQ03 144 aa13.16□□□□□ -0.3
TPM1-223ENST00000560445 TAPBPO15533 448 aa13.16□□□□□ -0.3
TPM1-223ENST00000560445 ZG16O60844 167 aa13.16□□□□□ -0.3
TPM1-223ENST00000560445 CTNSO60931 367 aa13.16□□□□□ -0.3
TPM1-223ENST00000560445 URI1O94763 535 aaPredicted RBP13.16□□□□□ -0.3
TPM1-223ENST00000560445 TUBB4AP04350 444 aa13.16□□□□□ -0.3
TPM1-223ENST00000560445 IFNA16P05015 189 aa13.16□□□□□ -0.3
TPM1-223ENST00000560445 SLC35E2BP0CK96 405 aa13.16□□□□□ -0.3
TPM1-223ENST00000560445 AGAP20933 346 aa13.16□□□□□ -0.3
TPM1-223ENST00000560445 TLX1P31314 330 aaPredicted RBP13.16□□□□□ -0.3
TPM1-223ENST00000560445 DCTP40126 519 aa13.16□□□□□ -0.3
TPM1-223ENST00000560445 MSH2P43246 934 aa13.16□□□□□ -0.3
TPM1-223ENST00000560445 SERPINB8P50452 374 aa13.16□□□□□ -0.3
TPM1-223ENST00000560445 RAP1GDS1P52306 607 aa13.16□□□□□ -0.3
TPM1-223ENST00000560445 GPX6P59796 221 aa13.16□□□□□ -0.3
TPM1-223ENST00000560445 BTG2P78543 158 aa13.16□□□□□ -0.3
TPM1-223ENST00000560445 PCDH1Q08174 1060 aa13.16□□□□□ -0.3
TPM1-223ENST00000560445 BMPR2Q13873 1038 aa13.16□□□□□ -0.3
TPM1-223ENST00000560445 OR4D1Q15615 310 aa13.16□□□□□ -0.3
TPM1-223ENST00000560445 SPINK14Q6IE38 97 aa13.16□□□□□ -0.3
TPM1-223ENST00000560445 XKRXQ6PP77 449 aa13.16□□□□□ -0.3
TPM1-223ENST00000560445 GALNTL5Q7Z4T8 443 aa13.16□□□□□ -0.3
TPM1-223ENST00000560445 CYP4Z2PQ8N1L4 340 aa13.16□□□□□ -0.3
TPM1-223ENST00000560445 SPATA6LQ8N4H0 392 aa13.16□□□□□ -0.3
TPM1-223ENST00000560445 MORN4Q8NDC4 146 aa13.16□□□□□ -0.3
TPM1-223ENST00000560445 FRMD6Q96NE9 622 aa13.16□□□□□ -0.3
TPM1-223ENST00000560445 QRFPRQ96P65 431 aa13.16□□□□□ -0.3
TPM1-223ENST00000560445 SIGLEC12Q96PQ1 595 aa13.16□□□□□ -0.3
TPM1-223ENST00000560445 TIMMDC1Q9NPL8 285 aa13.16□□□□□ -0.3
TPM1-223ENST00000560445 PNO1Q9NRX1 252 aaKnown RBP13.16□□□□□ -0.3
TPM1-223ENST00000560445 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.16□□□□□ -0.3
TPM1-223ENST00000560445 ANKRD10Q9NXR5 420 aa13.16□□□□□ -0.3
TPM1-223ENST00000560445 FBXW2Q9UKT8 454 aa13.16□□□□□ -0.3
TPM1-223ENST00000560445 YARS2Q9Y2Z4 477 aaKnown RBP13.16□□□□□ -0.3
TPM1-223ENST00000560445 PCDHGA11Q9Y5H2 935 aa13.16□□□□□ -0.3
TPM1-223ENST00000560445 UGDHO60701 494 aa13.15□□□□□ -0.3
TPM1-223ENST00000560445 NEURL1O76050 574 aa13.15□□□□□ -0.3
TPM1-223ENST00000560445 B3GALT4O96024 378 aa13.15□□□□□ -0.3
TPM1-223ENST00000560445 GFAPP14136 432 aa13.15□□□□□ -0.3
TPM1-223ENST00000560445 ABOP16442 354 aa13.15□□□□□ -0.3
TPM1-223ENST00000560445 MST1P26927 711 aa13.15□□□□□ -0.3
TPM1-223ENST00000560445 CERS1P27544 350 aa13.15□□□□□ -0.3
TPM1-223ENST00000560445 PIK3CBP42338 1070 aa13.15□□□□□ -0.3
TPM1-223ENST00000560445 SSR2P43308 183 aa13.15□□□□□ -0.3
TPM1-223ENST00000560445 SSR4P51571 173 aa13.15□□□□□ -0.3
TPM1-223ENST00000560445 LIM2P55344 173 aa13.15□□□□□ -0.3
TPM1-223ENST00000560445 E2F2Q14209 437 aa13.15□□□□□ -0.3
TPM1-223ENST00000560445 ACAP2Q15057 778 aa13.15□□□□□ -0.3
TPM1-223ENST00000560445 C10orf62Q5T681 223 aaPredicted RBP13.15□□□□□ -0.3
TPM1-223ENST00000560445 PAOXQ6QHF9 649 aa13.15□□□□□ -0.3
TPM1-223ENST00000560445 HSDL2Q6YN16 418 aa13.15□□□□□ -0.3
TPM1-223ENST00000560445 ISCA2Q86U28 154 aa13.15□□□□□ -0.3
TPM1-223ENST00000560445 LAS2Q8IYD9 372 aa13.15□□□□□ -0.3
TPM1-223ENST00000560445 FAM47BQ8NA70 645 aa13.15□□□□□ -0.3
TPM1-223ENST00000560445 NFAM1Q8NET5 270 aaPredicted RBP13.15□□□□□ -0.3
TPM1-223ENST00000560445 OR5L2Q8NGL0 311 aa13.15□□□□□ -0.3
TPM1-223ENST00000560445 OR8K3Q8NH51 312 aa13.15□□□□□ -0.3
TPM1-223ENST00000560445 ART5Q96L15 291 aa13.15□□□□□ -0.3
TPM1-223ENST00000560445 C16orf45Q96MC5 204 aaPredicted RBP13.15□□□□□ -0.3
TPM1-223ENST00000560445 PELOQ9BRX2 385 aaKnown RBP13.15□□□□□ -0.3
TPM1-223ENST00000560445 MS4A8Q9BY19 250 aa13.15□□□□□ -0.3
TPM1-223ENST00000560445 UNKQ9C0B0 810 aaKnown RBP13.15□□□□□ -0.3
TPM1-223ENST00000560445 NECTIN3Q9NQS3 549 aa13.15□□□□□ -0.3
TPM1-223ENST00000560445 PHF11Q9UIL8 331 aa13.15□□□□□ -0.3
TPM1-223ENST00000560445 ERVK-11Q9UQG0 969 aa13.15□□□□□ -0.3
TPM1-223ENST00000560445 TSC22D4Q9Y3Q8 395 aa13.15□□□□□ -0.3
TPM1-223ENST00000560445 TEX15Q9BXT5 2789 aa13.14□□□□□ -0.31
TPM1-223ENST00000560445 PRSS44E7EML9 344 aa13.14□□□□□ -0.31
TPM1-223ENST00000560445 NPIPA5E9PKD4 350 aa13.14□□□□□ -0.31
TPM1-223ENST00000560445 ACOT7O00154 380 aa13.14□□□□□ -0.31
TPM1-223ENST00000560445 PRRG2O14669 202 aa13.14□□□□□ -0.31
TPM1-223ENST00000560445 TFECO14948 347 aaPredicted RBP13.14□□□□□ -0.31
TPM1-223ENST00000560445 PIAS1O75925 651 aa13.14□□□□□ -0.31
TPM1-223ENST00000560445 SCELO95171 688 aa13.14□□□□□ -0.31
TPM1-223ENST00000560445 PCNAP12004 261 aa13.14□□□□□ -0.31
TPM1-223ENST00000560445 TNNI3P19429 210 aa13.14□□□□□ -0.31
TPM1-223ENST00000560445 HIST1H1TP22492 207 aaPredicted RBP13.14□□□□□ -0.31
TPM1-223ENST00000560445 CNTFP26441 200 aa13.14□□□□□ -0.31
TPM1-223ENST00000560445 ALDH18A1P54886 795 aaKnown RBP13.14□□□□□ -0.31
TPM1-223ENST00000560445 TBL3Q12788 808 aaKnown RBP13.14□□□□□ -0.31
TPM1-223ENST00000560445 RUNX2Q13950 521 aa13.14□□□□□ -0.31
TPM1-223ENST00000560445 C18orf21Q32NC0 220 aaPredicted RBP13.14□□□□□ -0.31
TPM1-223ENST00000560445 KHDRBS2Q5VWX1 349 aaKnown RBP13.14□□□□□ -0.31
TPM1-223ENST00000560445 LIPJQ5W064 366 aa13.14□□□□□ -0.31
TPM1-223ENST00000560445 GRHL2Q6ISB3 625 aa13.14□□□□□ -0.31
TPM1-223ENST00000560445 ZDHHC24Q6UX98 284 aa13.14□□□□□ -0.31
TPM1-223ENST00000560445 RGS9BPQ6ZS82 235 aa13.14□□□□□ -0.31
TPM1-223ENST00000560445 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.14□□□□□ -0.31
TPM1-223ENST00000560445 CMC1Q7Z7K0 106 aa13.14□□□□□ -0.31
TPM1-223ENST00000560445 MYLK4Q86YV6 388 aaPredicted RBP13.14□□□□□ -0.31
TPM1-223ENST00000560445 SPPL2CQ8IUH8 684 aa13.14□□□□□ -0.31
TPM1-223ENST00000560445 KIF2BQ8N4N8 673 aa13.14□□□□□ -0.31
TPM1-223ENST00000560445 APCDD1LQ8NCL9 501 aa13.14□□□□□ -0.31
TPM1-223ENST00000560445 ZNF592Q92610 1267 aa13.14□□□□□ -0.31
TPM1-223ENST00000560445 RGMAQ96B86 450 aa13.14□□□□□ -0.31
TPM1-223ENST00000560445 ATOH8Q96SQ7 321 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms