RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 BEST3Q8N1M1 668 aa12.76□□□□□ -0.37
SMAD3-214ENST00000560402 AFAP1L2Q8N4X5 818 aa12.76□□□□□ -0.37
SMAD3-214ENST00000560402 HORMAD2Q8N7B1 307 aa12.76□□□□□ -0.37
SMAD3-214ENST00000560402 FAM98AQ8NCA5 519 aaKnown RBP12.76□□□□□ -0.37
SMAD3-214ENST00000560402 MDS2Q8NDY4 140 aa12.76□□□□□ -0.37
SMAD3-214ENST00000560402 PLPP5Q8NEB5 264 aa12.76□□□□□ -0.37
SMAD3-214ENST00000560402 ABHD11Q8NFV4 315 aa12.76□□□□□ -0.37
SMAD3-214ENST00000560402 EEF1AKMT1Q8WVE0 214 aa12.76□□□□□ -0.37
SMAD3-214ENST00000560402 ITLN2Q8WWU7 325 aaPredicted RBP12.76□□□□□ -0.37
SMAD3-214ENST00000560402 CCDC126Q96EE4 140 aa12.76□□□□□ -0.37
SMAD3-214ENST00000560402 LINGO1Q96FE5 620 aa12.76□□□□□ -0.37
SMAD3-214ENST00000560402 CCDC120Q96HB5 630 aa12.76□□□□□ -0.37
SMAD3-214ENST00000560402 NDNQ99608 321 aa12.76□□□□□ -0.37
SMAD3-214ENST00000560402 UTP23Q9BRU9 249 aaKnown RBP12.76□□□□□ -0.37
SMAD3-214ENST00000560402 MCMBPQ9BTE3 642 aa12.76□□□□□ -0.37
SMAD3-214ENST00000560402 TRIM54Q9BYV2 358 aa12.76□□□□□ -0.37
SMAD3-214ENST00000560402 CHST11Q9NPF2 352 aa12.76□□□□□ -0.37
SMAD3-214ENST00000560402 ADAMTS6Q9UKP5 1117 aa12.76□□□□□ -0.37
SMAD3-214ENST00000560402 APCP25054 2843 aa12.75□□□□□ -0.37
SMAD3-214ENST00000560402 IGHV3-20A0A0C4DH32 117 aa12.75□□□□□ -0.37
SMAD3-214ENST00000560402 TRBC2A0A5B9 178 aa12.75□□□□□ -0.37
SMAD3-214ENST00000560402 FEZF1A0PJY2 475 aa12.75□□□□□ -0.37
SMAD3-214ENST00000560402 ASPDHA6ND91 283 aa12.75□□□□□ -0.37
SMAD3-214ENST00000560402 TMEM114B3SHH9 223 aa12.75□□□□□ -0.37
SMAD3-214ENST00000560402 CCL21O00585 134 aa12.75□□□□□ -0.37
SMAD3-214ENST00000560402 ATP5HO75947 161 aa12.75□□□□□ -0.37
SMAD3-214ENST00000560402 ENO2P09104 434 aaPredicted RBP12.75□□□□□ -0.37
SMAD3-214ENST00000560402 CD46P15529 392 aa12.75□□□□□ -0.37
SMAD3-214ENST00000560402 MST1P26927 711 aa12.75□□□□□ -0.37
SMAD3-214ENST00000560402 SNRPNP63162 240 aaKnown RBP12.75□□□□□ -0.37
SMAD3-214ENST00000560402 RHAGQ02094 409 aa12.75□□□□□ -0.37
SMAD3-214ENST00000560402 PDAP1Q13442 181 aaKnown RBP12.75□□□□□ -0.37
SMAD3-214ENST00000560402 PWP1Q13610 501 aa12.75□□□□□ -0.37
SMAD3-214ENST00000560402 TUBA3CQ13748 450 aa12.75□□□□□ -0.37
SMAD3-214ENST00000560402 ABRAXAS2Q15018 415 aa12.75□□□□□ -0.37
SMAD3-214ENST00000560402 SFT2D3Q587I9 215 aa12.75□□□□□ -0.37
SMAD3-214ENST00000560402 SP5Q6BEB4 398 aaPredicted RBP12.75□□□□□ -0.37
SMAD3-214ENST00000560402 TUBA3EQ6PEY2 450 aa12.75□□□□□ -0.37
SMAD3-214ENST00000560402 MBOAT1Q6ZNC8 495 aa12.75□□□□□ -0.37
SMAD3-214ENST00000560402 PDSS2Q86YH6 399 aa12.75□□□□□ -0.37
SMAD3-214ENST00000560402 WDR75Q8IWA0 830 aaKnown RBP12.75□□□□□ -0.37
SMAD3-214ENST00000560402 KIRREL3Q8IZU9 778 aa12.75□□□□□ -0.37
SMAD3-214ENST00000560402 KCT2Q8NC54 265 aa12.75□□□□□ -0.37
SMAD3-214ENST00000560402 THAP3Q8WTV1 239 aaPredicted RBP12.75□□□□□ -0.37
SMAD3-214ENST00000560402 SCMH1Q96GD3 660 aa12.75□□□□□ -0.37
SMAD3-214ENST00000560402 MAGED4Q96JG8 741 aa12.75□□□□□ -0.37
SMAD3-214ENST00000560402 CSMD1Q96PZ7 3565 aa12.75□□□□□ -0.37
SMAD3-214ENST00000560402 LRRC37BQ96QE4 947 aa12.75□□□□□ -0.37
SMAD3-214ENST00000560402 ATG10Q9H0Y0 220 aa12.75□□□□□ -0.37
SMAD3-214ENST00000560402 CLK4Q9HAZ1 481 aaKnown RBP12.75□□□□□ -0.37
SMAD3-214ENST00000560402 POPDC3Q9HBV1 291 aa12.75□□□□□ -0.37
SMAD3-214ENST00000560402 NPHS2Q9NP85 383 aa12.75□□□□□ -0.37
SMAD3-214ENST00000560402 SLCO1B3Q9NPD5 702 aa12.75□□□□□ -0.37
SMAD3-214ENST00000560402 LANCL2Q9NS86 450 aa12.75□□□□□ -0.37
SMAD3-214ENST00000560402 ARL15Q9NXU5 204 aa12.75□□□□□ -0.37
SMAD3-214ENST00000560402 SH2B3Q9UQQ2 575 aa12.75□□□□□ -0.37
SMAD3-214ENST00000560402 NAALAD2Q9Y3Q0 740 aa12.75□□□□□ -0.37
SMAD3-214ENST00000560402 URADA6NGE7 173 aa12.74□□□□□ -0.37
SMAD3-214ENST00000560402 A8MUI8 341 aa12.74□□□□□ -0.37
SMAD3-214ENST00000560402 H0YHG0 523 aa12.74□□□□□ -0.37
SMAD3-214ENST00000560402 NDUFS4O43181 175 aa12.74□□□□□ -0.37
SMAD3-214ENST00000560402 LCMT2O60294 686 aaKnown RBP12.74□□□□□ -0.37
SMAD3-214ENST00000560402 SLC19A2O60779 497 aa12.74□□□□□ -0.37
SMAD3-214ENST00000560402 KLHL2O95198 593 aa12.74□□□□□ -0.37
SMAD3-214ENST00000560402 ALOX12P18054 663 aa12.74□□□□□ -0.37
SMAD3-214ENST00000560402 AGAP20933 346 aa12.74□□□□□ -0.37
SMAD3-214ENST00000560402 EEF1DP29692 281 aaKnown RBP12.74□□□□□ -0.37
SMAD3-214ENST00000560402 HK2P52789 917 aa12.74□□□□□ -0.37
SMAD3-214ENST00000560402 ARFIP2P53365 341 aa12.74□□□□□ -0.37
SMAD3-214ENST00000560402 SLC26A5P58743 744 aa12.74□□□□□ -0.37
SMAD3-214ENST00000560402 IL2P60568 153 aa12.74□□□□□ -0.37
SMAD3-214ENST00000560402 TIAL1Q01085 375 aaKnown RBP eCLIP12.74□□□□□ -0.37
SMAD3-214ENST00000560402 PMP22Q01453 160 aa12.74□□□□□ -0.37
SMAD3-214ENST00000560402 MEF2AQ02078 507 aaPredicted RBP12.74□□□□□ -0.37
SMAD3-214ENST00000560402 ACTN3Q08043 901 aaPredicted RBP12.74□□□□□ -0.37
SMAD3-214ENST00000560402 RGS1Q08116 209 aa12.74□□□□□ -0.37
SMAD3-214ENST00000560402 BST1Q10588 318 aa12.74□□□□□ -0.37
SMAD3-214ENST00000560402 OR1C1Q15619 314 aa12.74□□□□□ -0.37
SMAD3-214ENST00000560402 NSDHLQ15738 373 aa12.74□□□□□ -0.37
SMAD3-214ENST00000560402 PHKG1Q16816 387 aa12.74□□□□□ -0.37
SMAD3-214ENST00000560402 KRTCAP3Q53RY4 240 aa12.74□□□□□ -0.37
SMAD3-214ENST00000560402 SPDYAQ5MJ70 313 aa12.74□□□□□ -0.37
SMAD3-214ENST00000560402 RBM20Q5T481 1227 aaKnown RBP12.74□□□□□ -0.37
SMAD3-214ENST00000560402 XKRXQ6PP77 449 aa12.74□□□□□ -0.37
SMAD3-214ENST00000560402 PAQR3Q6TCH7 311 aa12.74□□□□□ -0.37
SMAD3-214ENST00000560402 ABHD13Q7L211 337 aa12.74□□□□□ -0.37
SMAD3-214ENST00000560402 GDF7Q7Z4P5 450 aa12.74□□□□□ -0.37
SMAD3-214ENST00000560402 MRGPRGQ86SM5 289 aa12.74□□□□□ -0.37
SMAD3-214ENST00000560402 MCEMP1Q8IX19 187 aa12.74□□□□□ -0.37
SMAD3-214ENST00000560402 OR4K1Q8NGD4 311 aa12.74□□□□□ -0.37
SMAD3-214ENST00000560402 OR56A3Q8NH54 315 aa12.74□□□□□ -0.37
SMAD3-214ENST00000560402 NT5CQ8TCD5 201 aa12.74□□□□□ -0.37
SMAD3-214ENST00000560402 CCT6BQ92526 530 aa12.74□□□□□ -0.37
SMAD3-214ENST00000560402 TBC1D20Q96BZ9 403 aa12.74□□□□□ -0.37
SMAD3-214ENST00000560402 FBXL8Q96CD0 374 aa12.74□□□□□ -0.37
SMAD3-214ENST00000560402 PEX11GQ96HA9 241 aa12.74□□□□□ -0.37
SMAD3-214ENST00000560402 GPR137Q96N19 417 aa12.74□□□□□ -0.37
SMAD3-214ENST00000560402 UNKQ9C0B0 810 aaKnown RBP12.74□□□□□ -0.37
SMAD3-214ENST00000560402 C12orf65Q9H3J6 166 aaKnown RBP12.74□□□□□ -0.37
SMAD3-214ENST00000560402 CAB39LQ9H9S4 337 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms