RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 ADAMTS6Q9UKP5 1117 aa9.97□□□□□ -0.81
TRAF3-207ENST00000559734 PDE10AQ9Y233 779 aa9.97□□□□□ -0.81
TRAF3-207ENST00000559734 VPS9D1Q9Y2B5 631 aa9.97□□□□□ -0.81
TRAF3-207ENST00000559734 MMACHCQ9Y4U1 282 aa9.97□□□□□ -0.81
TRAF3-207ENST00000559734 CSPG4Q6UVK1 2322 aa9.96□□□□□ -0.81
TRAF3-207ENST00000559734 MAP1AP78559 2803 aaPredicted RBP9.96□□□□□ -0.81
TRAF3-207ENST00000559734 C15orf38-AP3S2A0A0A6YYH1 394 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 TRBC2A0A5B9 178 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 PABPN1LA6NDY0 278 aaKnown RBP9.96□□□□□ -0.82
TRAF3-207ENST00000559734 URADA6NGE7 173 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 TRIM64A6NGJ6 449 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 TRIM64BA6NI03 449 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 RNF212BA8MTL3 300 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 KDM4EB2RXH2 506 aaPredicted RBP9.96□□□□□ -0.82
TRAF3-207ENST00000559734 HCN1O60741 890 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 HRGP04196 525 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 PAMP19021 973 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 SAT1P21673 171 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 CCND1P24385 295 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 RPL22P35268 128 aaKnown RBP9.96□□□□□ -0.82
TRAF3-207ENST00000559734 PIGAP37287 484 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 TRPC1P48995 793 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 HK2P52789 917 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 CCZ1BP86790 482 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 CCZ1P86791 482 aaPredicted RBP9.96□□□□□ -0.82
TRAF3-207ENST00000559734 FOXO1Q12778 655 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 CTBP1Q13363 440 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 THOC5Q13769 683 aaKnown RBP9.96□□□□□ -0.82
TRAF3-207ENST00000559734 FBXL19-AS1Q494R0 122 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 CATSPEREQ5SY80 951 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 PRAMEF20Q5VT98 475 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 KIAA0930Q6ICG6 404 aaPredicted RBP9.96□□□□□ -0.82
TRAF3-207ENST00000559734 NEPROQ6NW34 567 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 HSDL2Q6YN16 418 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 MAATS1Q7Z4T9 603 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 YTHDF3Q7Z739 585 aaKnown RBP9.96□□□□□ -0.82
TRAF3-207ENST00000559734 TMEM139Q8IV31 216 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 DENND6AQ8IWF6 608 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 FAM47BQ8NA70 645 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 CD200R1Q8TD46 325 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 KCNJ9Q92806 393 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 TSNARE1Q96NA8 513 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 BAG1Q99933 345 aaPredicted RBP9.96□□□□□ -0.82
TRAF3-207ENST00000559734 HAUS8Q9BT25 410 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 BDH2Q9BUT1 245 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 KIFC1Q9BW19 673 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 EPB41L4BQ9H329 900 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 KLHL31Q9H511 634 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 ADAP2Q9NPF8 381 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 HOMER3Q9NSC5 361 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 INTS10Q9NVR2 710 aaKnown RBP9.96□□□□□ -0.82
TRAF3-207ENST00000559734 TRPS1Q9UHF7 1281 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 ZFP69BQ9UJL9 534 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 SOX13Q9UN79 622 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 MED16Q9Y2X0 877 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 DHRS7Q9Y394 339 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 ATG4BQ9Y4P1 393 aa9.96□□□□□ -0.82
TRAF3-207ENST00000559734 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.96□□□□□ -0.82
TRAF3-207ENST00000559734 NSD1Q96L73 2696 aaPredicted RBP9.96□□□□□ -0.82
TRAF3-207ENST00000559734 VPS13CQ709C8 3753 aa9.95□□□□□ -0.82
TRAF3-207ENST00000559734 A0A1W2PPR1 153 aa9.95□□□□□ -0.82
TRAF3-207ENST00000559734 CTAGE15A4D2H0 777 aa9.95□□□□□ -0.82
TRAF3-207ENST00000559734 C4orf51C9J302 202 aa9.95□□□□□ -0.82
TRAF3-207ENST00000559734 TGFBR3LH3BV60 316 aa9.95□□□□□ -0.82
TRAF3-207ENST00000559734 AP3B1O00203 1094 aa9.95□□□□□ -0.82
TRAF3-207ENST00000559734 CES2O00748 559 aa9.95□□□□□ -0.82
TRAF3-207ENST00000559734 IL2RAP01589 272 aa9.95□□□□□ -0.82
TRAF3-207ENST00000559734 C8BP07358 591 aa9.95□□□□□ -0.82
TRAF3-207ENST00000559734 HIST1H2AGP0C0S8 130 aaPredicted RBP9.95□□□□□ -0.82
TRAF3-207ENST00000559734 NPPBP16860 134 aa9.95□□□□□ -0.82
TRAF3-207ENST00000559734 HIST1H2ADP20671 130 aa9.95□□□□□ -0.82
TRAF3-207ENST00000559734 SCTRP47872 440 aa9.95□□□□□ -0.82
TRAF3-207ENST00000559734 HNRNPFP52597 415 aaKnown RBP9.95□□□□□ -0.82
TRAF3-207ENST00000559734 ZNF136P52737 540 aa9.95□□□□□ -0.82
TRAF3-207ENST00000559734 KCNJ2P63252 427 aa9.95□□□□□ -0.82
TRAF3-207ENST00000559734 BTN3A2P78410 334 aa9.95□□□□□ -0.82
TRAF3-207ENST00000559734 CBLBQ13191 982 aa9.95□□□□□ -0.82
TRAF3-207ENST00000559734 CSHL1Q14406 222 aa9.95□□□□□ -0.82
TRAF3-207ENST00000559734 RBBP5Q15291 538 aaKnown RBP9.95□□□□□ -0.82
TRAF3-207ENST00000559734 KCTD19Q17RG1 926 aaPredicted RBP9.95□□□□□ -0.82
TRAF3-207ENST00000559734 ACSF3Q4G176 576 aaPredicted RBP9.95□□□□□ -0.82
TRAF3-207ENST00000559734 SEL1L2Q5TEA6 688 aa9.95□□□□□ -0.82
TRAF3-207ENST00000559734 ZNF549Q6P9A3 640 aa9.95□□□□□ -0.82
TRAF3-207ENST00000559734 KIAA1328Q86T90 577 aa9.95□□□□□ -0.82
TRAF3-207ENST00000559734 CTAGE6Q86UF2 777 aa9.95□□□□□ -0.82
TRAF3-207ENST00000559734 SCUBE1Q8IWY4 988 aa9.95□□□□□ -0.82
TRAF3-207ENST00000559734 TMEM132CQ8N3T6 1108 aa9.95□□□□□ -0.82
TRAF3-207ENST00000559734 GOLM1Q8NBJ4 401 aa9.95□□□□□ -0.82
TRAF3-207ENST00000559734 ABHD11Q8NFV4 315 aa9.95□□□□□ -0.82
TRAF3-207ENST00000559734 ZNF669Q96BR6 464 aaPredicted RBP9.95□□□□□ -0.82
TRAF3-207ENST00000559734 PERPQ96FX8 193 aa9.95□□□□□ -0.82
TRAF3-207ENST00000559734 SNF8Q96H20 258 aa9.95□□□□□ -0.82
TRAF3-207ENST00000559734 HIST1H2AHQ96KK5 128 aa9.95□□□□□ -0.82
TRAF3-207ENST00000559734 HIST1H2AJQ99878 128 aa9.95□□□□□ -0.82
TRAF3-207ENST00000559734 H2AFJQ9BTM1 129 aa9.95□□□□□ -0.82
TRAF3-207ENST00000559734 SGPP1Q9BX95 441 aa9.95□□□□□ -0.82
TRAF3-207ENST00000559734 OR8D2Q9GZM6 311 aa9.95□□□□□ -0.82
TRAF3-207ENST00000559734 EIF2B3Q9NR50 452 aaKnown RBP9.95□□□□□ -0.82
TRAF3-207ENST00000559734 KLHL42Q9P2K6 505 aa9.95□□□□□ -0.82
TRAF3-207ENST00000559734 TRMT6Q9UJA5 497 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms