RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 ACTL8Q9H568 366 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 MANSC1Q9H8J5 431 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 WDR54Q9H977 334 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 CLK4Q9HAZ1 481 aaKnown RBP8.53□□□□□ -1.04
HMG20A-209ENST00000559728 EML4Q9HC35 981 aaKnown RBP8.53□□□□□ -1.04
HMG20A-209ENST00000559728 SLCO1B3Q9NPD5 702 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 THAP1Q9NVV9 213 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 SIRT5Q9NXA8 310 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 VPS29Q9UBQ0 182 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 GIMAP2Q9UG22 337 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 TCFL5Q9UL49 500 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 ZMIZ1Q9ULJ6 1067 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 DAPP1Q9UN19 280 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 CDC14AQ9UNH5 594 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 SLC12A4Q9UP95 1085 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.53□□□□□ -1.04
HMG20A-209ENST00000559728 ATG4BQ9Y4P1 393 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 FER1L5A0AVI2 2057 aa8.53□□□□□ -1.04
HMG20A-209ENST00000559728 IGKV3D-11A0A0A0MRZ8 115 aa8.52□□□□□ -1.05
HMG20A-209ENST00000559728 A0A1W2PR48 441 aa8.52□□□□□ -1.05
HMG20A-209ENST00000559728 URADA6NGE7 173 aa8.52□□□□□ -1.05
HMG20A-209ENST00000559728 SRRM3A6NNA2 597 aaPredicted RBP8.52□□□□□ -1.05
HMG20A-209ENST00000559728 WASHC1A8K0Z3 465 aa8.52□□□□□ -1.05
HMG20A-209ENST00000559728 LSM1O15116 133 aaKnown RBP8.52□□□□□ -1.05
HMG20A-209ENST00000559728 NKX2-8O15522 239 aa8.52□□□□□ -1.05
HMG20A-209ENST00000559728 CREG1O75629 220 aa8.52□□□□□ -1.05
HMG20A-209ENST00000559728 LINC00032P0C843 101 aa8.52□□□□□ -1.05
HMG20A-209ENST00000559728 PRR35P0CG20 571 aa8.52□□□□□ -1.05
HMG20A-209ENST00000559728 TSFMP43897 325 aaKnown RBP8.52□□□□□ -1.05
HMG20A-209ENST00000559728 XCR1P46094 333 aa8.52□□□□□ -1.05
HMG20A-209ENST00000559728 RPL14P50914 215 aaKnown RBP8.52□□□□□ -1.05
HMG20A-209ENST00000559728 HK2P52789 917 aa8.52□□□□□ -1.05
HMG20A-209ENST00000559728 BTG2P78543 158 aa8.52□□□□□ -1.05
HMG20A-209ENST00000559728 BTKQ06187 659 aa8.52□□□□□ -1.05
HMG20A-209ENST00000559728 KLC1Q07866 573 aa8.52□□□□□ -1.05
HMG20A-209ENST00000559728 SLAMF1Q13291 335 aa8.52□□□□□ -1.05
HMG20A-209ENST00000559728 RFTN2Q52LD8 501 aaPredicted RBP8.52□□□□□ -1.05
HMG20A-209ENST00000559728 GALNT18Q6P9A2 607 aa8.52□□□□□ -1.05
HMG20A-209ENST00000559728 TRIM40Q6P9F5 258 aa8.52□□□□□ -1.05
HMG20A-209ENST00000559728 RIPOR1Q6ZS17 1223 aa8.52□□□□□ -1.05
HMG20A-209ENST00000559728 PPP1R32Q7Z5V6 425 aa8.52□□□□□ -1.05
HMG20A-209ENST00000559728 SCUBE1Q8IWY4 988 aa8.52□□□□□ -1.05
HMG20A-209ENST00000559728 C1orf52Q8N6N3 182 aaKnown RBP8.52□□□□□ -1.05
HMG20A-209ENST00000559728 SRFBP1Q8NEF9 429 aaKnown RBP8.52□□□□□ -1.05
HMG20A-209ENST00000559728 OR2Y1Q8NGV0 311 aa8.52□□□□□ -1.05
HMG20A-209ENST00000559728 PPP1R14CQ8TAE6 165 aa8.52□□□□□ -1.05
HMG20A-209ENST00000559728 SNRNP27Q8WVK2 155 aaKnown RBP8.52□□□□□ -1.05
HMG20A-209ENST00000559728 STARD8Q92502 1023 aa8.52□□□□□ -1.05
HMG20A-209ENST00000559728 PEX11GQ96HA9 241 aa8.52□□□□□ -1.05
HMG20A-209ENST00000559728 CRELD1Q96HD1 420 aa8.52□□□□□ -1.05
HMG20A-209ENST00000559728 CCNL2Q96S94 520 aaPredicted RBP8.52□□□□□ -1.05
HMG20A-209ENST00000559728 SERINC2Q96SA4 455 aa8.52□□□□□ -1.05
HMG20A-209ENST00000559728 NPLQ9BXD5 320 aaPredicted RBP8.52□□□□□ -1.05
HMG20A-209ENST00000559728 RBCK1Q9BYM8 510 aa8.52□□□□□ -1.05
HMG20A-209ENST00000559728 VN1R1Q9GZP7 353 aa8.52□□□□□ -1.05
HMG20A-209ENST00000559728 SOX17Q9H6I2 414 aaPredicted RBP8.52□□□□□ -1.05
HMG20A-209ENST00000559728 GPN2Q9H9Y4 310 aaPredicted RBP8.52□□□□□ -1.05
HMG20A-209ENST00000559728 LYRM4Q9HD34 91 aa8.52□□□□□ -1.05
HMG20A-209ENST00000559728 MKKSQ9NPJ1 570 aaPredicted RBP8.52□□□□□ -1.05
HMG20A-209ENST00000559728 INTS9Q9NV88 658 aaKnown RBP8.52□□□□□ -1.05
HMG20A-209ENST00000559728 TRPC4Q9UBN4 977 aa8.52□□□□□ -1.05
HMG20A-209ENST00000559728 ZNF282Q9UDV7 671 aaPredicted RBP8.52□□□□□ -1.05
HMG20A-209ENST00000559728 EXO1Q9UQ84 846 aaKnown RBP8.52□□□□□ -1.05
HMG20A-209ENST00000559728 FIS1Q9Y3D6 152 aa8.52□□□□□ -1.05
HMG20A-209ENST00000559728 PCM1Q15154 2024 aa8.52□□□□□ -1.05
HMG20A-209ENST00000559728 A0A1W2PS29 197 aa8.51□□□□□ -1.05
HMG20A-209ENST00000559728 K7ENP7 123 aa8.51□□□□□ -1.05
HMG20A-209ENST00000559728 SOCS6O14544 535 aa8.51□□□□□ -1.05
HMG20A-209ENST00000559728 PROM1O43490 865 aa8.51□□□□□ -1.05
HMG20A-209ENST00000559728 SKAP2O75563 359 aaPredicted RBP8.51□□□□□ -1.05
HMG20A-209ENST00000559728 PRKRAO75569 313 aaKnown RBP8.51□□□□□ -1.05
HMG20A-209ENST00000559728 RSL1D1O76021 490 aaKnown RBP8.51□□□□□ -1.05
HMG20A-209ENST00000559728 SNUPNO95149 360 aaKnown RBP8.51□□□□□ -1.05
HMG20A-209ENST00000559728 KLK1P06870 262 aa8.51□□□□□ -1.05
HMG20A-209ENST00000559728 FHP07954 510 aa8.51□□□□□ -1.05
HMG20A-209ENST00000559728 FAM58BPP0C7Q3 252 aa8.51□□□□□ -1.05
HMG20A-209ENST00000559728 PIM1P11309 404 aaPredicted RBP8.51□□□□□ -1.05
HMG20A-209ENST00000559728 TACR1P25103 407 aa8.51□□□□□ -1.05
HMG20A-209ENST00000559728 SSR2P43308 183 aa8.51□□□□□ -1.05
HMG20A-209ENST00000559728 RAB38P57729 211 aa8.51□□□□□ -1.05
HMG20A-209ENST00000559728 PHEXP78562 749 aa8.51□□□□□ -1.05
HMG20A-209ENST00000559728 PRSS53Q2L4Q9 553 aa8.51□□□□□ -1.05
HMG20A-209ENST00000559728 AP5B1Q2VPB7 878 aa8.51□□□□□ -1.05
HMG20A-209ENST00000559728 CRTC2Q53ET0 693 aaPredicted RBP8.51□□□□□ -1.05
HMG20A-209ENST00000559728 ATG16L1Q676U5 607 aa8.51□□□□□ -1.05
HMG20A-209ENST00000559728 C18orf63Q68DL7 685 aa8.51□□□□□ -1.05
HMG20A-209ENST00000559728 NIPAL1Q6NVV3 410 aa8.51□□□□□ -1.05
HMG20A-209ENST00000559728 INO80CQ6PI98 192 aaPredicted RBP8.51□□□□□ -1.05
HMG20A-209ENST00000559728 TMEM205Q6UW68 189 aa8.51□□□□□ -1.05
HMG20A-209ENST00000559728 NUDT13Q86X67 352 aa8.51□□□□□ -1.05
HMG20A-209ENST00000559728 PRSS58Q8IYP2 241 aa8.51□□□□□ -1.05
HMG20A-209ENST00000559728 MMP21Q8N119 569 aa8.51□□□□□ -1.05
HMG20A-209ENST00000559728 SREK1Q8WXA9 508 aaKnown RBP8.51□□□□□ -1.05
HMG20A-209ENST00000559728 TSLPQ969D9 159 aa8.51□□□□□ -1.05
HMG20A-209ENST00000559728 ANKRD9Q96BM1 317 aaPredicted RBP8.51□□□□□ -1.05
HMG20A-209ENST00000559728 TBC1D20Q96BZ9 403 aa8.51□□□□□ -1.05
HMG20A-209ENST00000559728 MIEF2Q96C03 454 aa8.51□□□□□ -1.05
HMG20A-209ENST00000559728 TM4SF18Q96CE8 201 aa8.51□□□□□ -1.05
HMG20A-209ENST00000559728 FAR2Q96K12 515 aa8.51□□□□□ -1.05
HMG20A-209ENST00000559728 C7orf26Q96N11 449 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms