RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 C8orf89P0DMQ9 161 aa6.92□□□□□ -1.3
SPG11-213ENST00000558988 ITGAMP11215 1152 aa6.92□□□□□ -1.3
SPG11-213ENST00000558988 XCR1P46094 333 aa6.92□□□□□ -1.3
SPG11-213ENST00000558988 FNTAP49354 379 aa6.92□□□□□ -1.3
SPG11-213ENST00000558988 RGS4P49798 205 aa6.92□□□□□ -1.3
SPG11-213ENST00000558988 CDKN2DP55273 166 aa6.92□□□□□ -1.3
SPG11-213ENST00000558988 KCNK10P57789 538 aa6.92□□□□□ -1.3
SPG11-213ENST00000558988 ABATP80404 500 aa6.92□□□□□ -1.3
SPG11-213ENST00000558988 COL10A1Q03692 680 aa6.92□□□□□ -1.3
SPG11-213ENST00000558988 MFAP5Q13361 173 aa6.92□□□□□ -1.3
SPG11-213ENST00000558988 NAE1Q13564 534 aa6.92□□□□□ -1.3
SPG11-213ENST00000558988 PHKG1Q16816 387 aa6.92□□□□□ -1.3
SPG11-213ENST00000558988 BTBD16Q32M84 506 aa6.92□□□□□ -1.3
SPG11-213ENST00000558988 RNASEH2BQ5TBB1 312 aaKnown RBP6.92□□□□□ -1.3
SPG11-213ENST00000558988 FCRLBQ6BAA4 426 aa6.92□□□□□ -1.3
SPG11-213ENST00000558988 ZNF425Q6IV72 752 aa6.92□□□□□ -1.3
SPG11-213ENST00000558988 UGT3A1Q6NUS8 523 aa6.92□□□□□ -1.3
SPG11-213ENST00000558988 LANCL3Q6ZV70 420 aa6.92□□□□□ -1.3
SPG11-213ENST00000558988 NEK10Q6ZWH5 1172 aa6.92□□□□□ -1.3
SPG11-213ENST00000558988 NDUFAF7Q7L592 441 aa6.92□□□□□ -1.3
SPG11-213ENST00000558988 C17orf64Q86WR6 236 aa6.92□□□□□ -1.3
SPG11-213ENST00000558988 NAT8LQ8N9F0 302 aa6.92□□□□□ -1.3
SPG11-213ENST00000558988 IL17DQ8TAD2 202 aa6.92□□□□□ -1.3
SPG11-213ENST00000558988 METTL21AQ8WXB1 218 aa6.92□□□□□ -1.3
SPG11-213ENST00000558988 PYCR2Q96C36 320 aa6.92□□□□□ -1.3
SPG11-213ENST00000558988 TSNARE1Q96NA8 513 aa6.92□□□□□ -1.3
SPG11-213ENST00000558988 LRRC37BQ96QE4 947 aa6.92□□□□□ -1.3
SPG11-213ENST00000558988 LMF1Q96S06 567 aa6.92□□□□□ -1.3
SPG11-213ENST00000558988 EBNA1BP2Q99848 306 aaKnown RBP6.92□□□□□ -1.3
SPG11-213ENST00000558988 TRIM51Q9BSJ1 452 aa6.92□□□□□ -1.3
SPG11-213ENST00000558988 ANKHQ9HCJ1 492 aa6.92□□□□□ -1.3
SPG11-213ENST00000558988 MKKSQ9NPJ1 570 aaPredicted RBP6.92□□□□□ -1.3
SPG11-213ENST00000558988 OLAHQ9NV23 265 aa6.92□□□□□ -1.3
SPG11-213ENST00000558988 RIC8BQ9NVN3 520 aa6.92□□□□□ -1.3
SPG11-213ENST00000558988 SNX12Q9UMY4 172 aa6.92□□□□□ -1.3
SPG11-213ENST00000558988 PDE10AQ9Y233 779 aa6.92□□□□□ -1.3
SPG11-213ENST00000558988 NEU2Q9Y3R4 380 aa6.92□□□□□ -1.3
SPG11-213ENST00000558988 KLK4Q9Y5K2 254 aa6.92□□□□□ -1.3
SPG11-213ENST00000558988 SPTAN1Q13813 2472 aaKnown RBP6.91□□□□□ -1.3
SPG11-213ENST00000558988 SCN2AQ99250 2005 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 IGHV1-45A0A0A0MS14 117 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 GFYI3L273 518 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 TXNDC9O14530 226 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 DNALI1O14645 258 aaPredicted RBP6.91□□□□□ -1.3
SPG11-213ENST00000558988 LRRTM2O43300 516 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 ZSCAN12O43309 604 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 OR1F1O43749 312 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 CLDN1O95832 211 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 DDAH2O95865 285 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 ONECUT2O95948 504 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 LDLRP01130 860 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 SERPINA7P05543 415 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 HIST1H2AGP0C0S8 130 aaPredicted RBP6.91□□□□□ -1.3
SPG11-213ENST00000558988 HIST1H2ADP20671 130 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 BCL6P41182 706 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 HNF4AP41235 474 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 ELK3P41970 407 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 SKIV2L2P42285 1042 aaKnown RBP6.91□□□□□ -1.3
SPG11-213ENST00000558988 MAGEA3P43357 314 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 TSFMP43897 325 aaKnown RBP6.91□□□□□ -1.3
SPG11-213ENST00000558988 SOX8P57073 446 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 RPS15AP62244 130 aaKnown RBP6.91□□□□□ -1.3
SPG11-213ENST00000558988 OLR1P78380 273 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 PMP22Q01453 160 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 PCOLCEQ15113 449 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 CYP1B1Q16678 543 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 SPANXN3Q5MJ09 141 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 ABHD17BQ5VST6 288 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 GARNL3Q5VVW2 1013 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 C1QL3Q5VWW1 255 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 ATG9BQ674R7 924 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 AGTRAPQ6RW13 159 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 CYHR1Q6ZMK1 362 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 MAMDC2Q7Z304 686 aaPredicted RBP6.91□□□□□ -1.3
SPG11-213ENST00000558988 VN1R4Q7Z5H5 301 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 ASPGQ86U10 573 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 FJX1Q86VR8 437 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 SLC26A11Q86WA9 606 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 BCORP1Q8N888 145 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 ST6GALNAC3Q8NDV1 305 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 OR5T3Q8NGG3 340 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 OR51Q1Q8NH59 317 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 GABPB2Q8TAK5 448 aaPredicted RBP6.91□□□□□ -1.3
SPG11-213ENST00000558988 ACTRT1Q8TDG2 376 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 FAR1Q8WVX9 515 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 NACC2Q96BF6 587 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 CERS2Q96G23 380 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 HIST1H2AHQ96KK5 128 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 CCDC138Q96M89 665 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 HIST1H2AJQ99878 128 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 MCMBPQ9BTE3 642 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 H2AFJQ9BTM1 129 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 VN1R1Q9GZP7 353 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 RHBGQ9H310 441 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 PARVBQ9HBI1 364 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 TMEM184CQ9NVA4 438 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 ANKRD10Q9NXR5 420 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 ARL15Q9NXU5 204 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 TAS2R13Q9NYV9 303 aa6.91□□□□□ -1.3
SPG11-213ENST00000558988 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms