RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 ALAS2P22557 587 aa17.1■□□□□ 0.33
CLPX-203ENST00000558958 POLR2JP52435 117 aaKnown RBP17.1■□□□□ 0.33
CLPX-203ENST00000558958 OLR1P78380 273 aa17.1■□□□□ 0.33
CLPX-203ENST00000558958 EIF3IQ13347 325 aaKnown RBP17.1■□□□□ 0.33
CLPX-203ENST00000558958 RCAN2Q14206 197 aa17.1■□□□□ 0.33
CLPX-203ENST00000558958 GK5Q6ZS86 529 aa17.1■□□□□ 0.33
CLPX-203ENST00000558958 CA13Q8N1Q1 262 aa17.1■□□□□ 0.33
CLPX-203ENST00000558958 OR5T3Q8NGG3 340 aa17.1■□□□□ 0.33
CLPX-203ENST00000558958 MMABQ96EY8 250 aaPredicted RBP17.1■□□□□ 0.33
CLPX-203ENST00000558958 REEP4Q9H6H4 257 aa17.1■□□□□ 0.33
CLPX-203ENST00000558958 ACTR5Q9H9F9 607 aaPredicted RBP17.1■□□□□ 0.33
CLPX-203ENST00000558958 ARL8BQ9NVJ2 186 aa17.1■□□□□ 0.33
CLPX-203ENST00000558958 SLC39A1Q9NY26 324 aa17.1■□□□□ 0.33
CLPX-203ENST00000558958 PHF11Q9UIL8 331 aa17.1■□□□□ 0.33
CLPX-203ENST00000558958 CDC14AQ9UNH5 594 aa17.1■□□□□ 0.33
CLPX-203ENST00000558958 TMEM184BQ9Y519 407 aaPredicted RBP17.1■□□□□ 0.33
CLPX-203ENST00000558958 CNOT1A5YKK6 2376 aaKnown RBP17.1■□□□□ 0.33
CLPX-203ENST00000558958 A0A1B0GX78 115 aa17.09■□□□□ 0.33
CLPX-203ENST00000558958 GABRR3A8MPY1 467 aa17.09■□□□□ 0.33
CLPX-203ENST00000558958 SCAMP2O15127 329 aaKnown RBP17.09■□□□□ 0.33
CLPX-203ENST00000558958 UBOX5O94941 541 aa17.09■□□□□ 0.33
CLPX-203ENST00000558958 FURINP09958 794 aa17.09■□□□□ 0.33
CLPX-203ENST00000558958 ITIH1P19827 911 aa17.09■□□□□ 0.33
CLPX-203ENST00000558958 PRDX6P30041 224 aa17.09■□□□□ 0.33
CLPX-203ENST00000558958 HPCAL1P37235 193 aa17.09■□□□□ 0.33
CLPX-203ENST00000558958 PDE7AQ13946 482 aa17.09■□□□□ 0.33
CLPX-203ENST00000558958 HEPACAMQ14CZ8 416 aa17.09■□□□□ 0.33
CLPX-203ENST00000558958 UGT8Q16880 541 aa17.09■□□□□ 0.33
CLPX-203ENST00000558958 RSPO4Q2I0M5 234 aaPredicted RBP17.09■□□□□ 0.33
CLPX-203ENST00000558958 KIF26BQ2KJY2 2108 aa17.09■□□□□ 0.33
CLPX-203ENST00000558958 NDUFAF5Q5TEU4 345 aa17.09■□□□□ 0.33
CLPX-203ENST00000558958 PRMT9Q6P2P2 845 aa17.09■□□□□ 0.33
CLPX-203ENST00000558958 TMPRSS12Q86WS5 348 aa17.09■□□□□ 0.33
CLPX-203ENST00000558958 MMP21Q8N119 569 aa17.09■□□□□ 0.33
CLPX-203ENST00000558958 METTL27Q8N6F8 245 aaPredicted RBP17.09■□□□□ 0.33
CLPX-203ENST00000558958 EFCAB3Q8N7B9 438 aa17.09■□□□□ 0.33
CLPX-203ENST00000558958 STARD8Q92502 1023 aa17.09■□□□□ 0.33
CLPX-203ENST00000558958 CMTM5Q96DZ9 223 aa17.09■□□□□ 0.33
CLPX-203ENST00000558958 MTERF3Q96E29 417 aa17.09■□□□□ 0.33
CLPX-203ENST00000558958 FAIM2Q9BWQ8 316 aa17.09■□□□□ 0.33
CLPX-203ENST00000558958 SLC52A3Q9NQ40 469 aa17.09■□□□□ 0.33
CLPX-203ENST00000558958 MS4A12Q9NXJ0 267 aa17.09■□□□□ 0.33
CLPX-203ENST00000558958 NDOR1Q9UHB4 597 aa17.09■□□□□ 0.33
CLPX-203ENST00000558958 ATP6V1HQ9UI12 483 aa17.09■□□□□ 0.33
CLPX-203ENST00000558958 CFAP54Q96N23 3096 aa17.08■□□□□ 0.33
CLPX-203ENST00000558958 LOC100653049A0A140TA62 436 aa17.08■□□□□ 0.32
CLPX-203ENST00000558958 A0A1W2PNU3 283 aaPredicted RBP17.08■□□□□ 0.32
CLPX-203ENST00000558958 NR5A2O00482 541 aa17.08■□□□□ 0.32
CLPX-203ENST00000558958 CHST10O43529 356 aa17.08■□□□□ 0.32
CLPX-203ENST00000558958 KRT34O76011 436 aa17.08■□□□□ 0.32
CLPX-203ENST00000558958 AIFM1O95831 613 aa17.08■□□□□ 0.32
CLPX-203ENST00000558958 SNRPB2P08579 225 aaKnown RBP17.08■□□□□ 0.32
CLPX-203ENST00000558958 HBQ1P09105 142 aa17.08■□□□□ 0.32
CLPX-203ENST00000558958 COX4I1P13073 169 aa17.08■□□□□ 0.32
CLPX-203ENST00000558958 DRD2P14416 443 aa17.08■□□□□ 0.32
CLPX-203ENST00000558958 DDCP20711 480 aa17.08■□□□□ 0.32
CLPX-203ENST00000558958 RPL3P39023 403 aaKnown RBP17.08■□□□□ 0.32
CLPX-203ENST00000558958 ETV5P41161 510 aa17.08■□□□□ 0.32
CLPX-203ENST00000558958 RAB15P59190 212 aa17.08■□□□□ 0.32
CLPX-203ENST00000558958 MAPRE2Q15555 327 aa17.08■□□□□ 0.32
CLPX-203ENST00000558958 DPY19L1Q2PZI1 675 aa17.08■□□□□ 0.32
CLPX-203ENST00000558958 C18orf63Q68DL7 685 aa17.08■□□□□ 0.32
CLPX-203ENST00000558958 R3HCC1LQ7Z5L2 792 aaKnown RBP17.08■□□□□ 0.32
CLPX-203ENST00000558958 SNX32Q86XE0 403 aa17.08■□□□□ 0.32
CLPX-203ENST00000558958 POU5F2Q8N7G0 328 aa17.08■□□□□ 0.32
CLPX-203ENST00000558958 SLC38A9Q8NBW4 561 aa17.08■□□□□ 0.32
CLPX-203ENST00000558958 OR7A2PQ8NGA2 310 aa17.08■□□□□ 0.32
CLPX-203ENST00000558958 RP9Q8TA86 221 aaKnown RBP17.08■□□□□ 0.32
CLPX-203ENST00000558958 TSPEARQ8WU66 669 aa17.08■□□□□ 0.32
CLPX-203ENST00000558958 SLC7A5P2Q9GIP4 190 aa17.08■□□□□ 0.32
CLPX-203ENST00000558958 TXLNGQ9NUQ3 528 aa17.08■□□□□ 0.32
CLPX-203ENST00000558958 PCDHA9Q9Y5H5 950 aa17.08■□□□□ 0.32
CLPX-203ENST00000558958 KNTC1P50748 2209 aa17.07■□□□□ 0.32
CLPX-203ENST00000558958 PMS2P1A4D2B8 440 aa17.07■□□□□ 0.32
CLPX-203ENST00000558958 CYR61O00622 381 aa17.07■□□□□ 0.32
CLPX-203ENST00000558958 PLD2O14939 933 aa17.07■□□□□ 0.32
CLPX-203ENST00000558958 TBX19O60806 448 aa17.07■□□□□ 0.32
CLPX-203ENST00000558958 CBX6O95503 412 aa17.07■□□□□ 0.32
CLPX-203ENST00000558958 NTRK1P04629 796 aa17.07■□□□□ 0.32
CLPX-203ENST00000558958 IL6P05231 212 aa17.07■□□□□ 0.32
CLPX-203ENST00000558958 PIM1P11309 404 aaPredicted RBP17.07■□□□□ 0.32
CLPX-203ENST00000558958 COX7A2P14406 83 aa17.07■□□□□ 0.32
CLPX-203ENST00000558958 ITGAXP20702 1163 aa17.07■□□□□ 0.32
CLPX-203ENST00000558958 CAPN3P20807 821 aa17.07■□□□□ 0.32
CLPX-203ENST00000558958 CPN2P22792 545 aa17.07■□□□□ 0.32
CLPX-203ENST00000558958 RAB38P57729 211 aa17.07■□□□□ 0.32
CLPX-203ENST00000558958 KCNK10P57789 538 aa17.07■□□□□ 0.32
CLPX-203ENST00000558958 TNFRSF17Q02223 184 aa17.07■□□□□ 0.32
CLPX-203ENST00000558958 SRSF11Q05519 484 aaKnown RBP17.07■□□□□ 0.32
CLPX-203ENST00000558958 TARDBPQ13148 414 aaKnown RBP eCLIP17.07■□□□□ 0.32
CLPX-203ENST00000558958 CYLC2Q14093 348 aaPredicted RBP17.07■□□□□ 0.32
CLPX-203ENST00000558958 FAM174BQ3ZCQ3 159 aa17.07■□□□□ 0.32
CLPX-203ENST00000558958 SPANXN4Q5MJ08 99 aa17.07■□□□□ 0.32
CLPX-203ENST00000558958 DCAF12Q5T6F0 453 aa17.07■□□□□ 0.32
CLPX-203ENST00000558958 CEACAM20Q6UY09 585 aa17.07■□□□□ 0.32
CLPX-203ENST00000558958 CAMKMTQ7Z624 323 aa17.07■□□□□ 0.32
CLPX-203ENST00000558958 SHISA5Q8N114 240 aa17.07■□□□□ 0.32
CLPX-203ENST00000558958 WDR36Q8NI36 951 aaKnown RBP17.07■□□□□ 0.32
CLPX-203ENST00000558958 ADAMTS14Q8WXS8 1223 aa17.07■□□□□ 0.32
CLPX-203ENST00000558958 PMEPA1Q969W9 287 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms