RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 TBCDQ9BTW9 1192 aa14.33□□□□□ -0.12
RPL28-207ENST00000558815 ROGDIQ9GZN7 287 aa14.33□□□□□ -0.12
RPL28-207ENST00000558815 NOL11Q9H8H0 719 aaKnown RBP14.33□□□□□ -0.12
RPL28-207ENST00000558815 DMRT3Q9NQL9 472 aa14.33□□□□□ -0.12
RPL28-207ENST00000558815 FBXW2Q9UKT8 454 aa14.33□□□□□ -0.12
RPL28-207ENST00000558815 GABRR3A8MPY1 467 aa14.32□□□□□ -0.12
RPL28-207ENST00000558815 PRAMEF2O60811 474 aa14.32□□□□□ -0.12
RPL28-207ENST00000558815 CBX6O95503 412 aa14.32□□□□□ -0.12
RPL28-207ENST00000558815 IFNA16P05015 189 aa14.32□□□□□ -0.12
RPL28-207ENST00000558815 COL6A2P12110 1019 aa14.32□□□□□ -0.12
RPL28-207ENST00000558815 ATP5A1P25705 553 aaKnown RBP14.32□□□□□ -0.12
RPL28-207ENST00000558815 SERPINB1P30740 379 aa14.32□□□□□ -0.12
RPL28-207ENST00000558815 CCNG1P51959 295 aa14.32□□□□□ -0.12
RPL28-207ENST00000558815 HSD17B7P56937 341 aa14.32□□□□□ -0.12
RPL28-207ENST00000558815 RCN2Q14257 317 aa14.32□□□□□ -0.12
RPL28-207ENST00000558815 SLC29A2Q14542 456 aa14.32□□□□□ -0.12
RPL28-207ENST00000558815 TMEM35AQ53FP2 167 aa14.32□□□□□ -0.12
RPL28-207ENST00000558815 KHDRBS2Q5VWX1 349 aaKnown RBP14.32□□□□□ -0.12
RPL28-207ENST00000558815 LIPJQ5W064 366 aa14.32□□□□□ -0.12
RPL28-207ENST00000558815 H3F3CQ6NXT2 135 aa14.32□□□□□ -0.12
RPL28-207ENST00000558815 RPS27LQ71UM5 84 aaKnown RBP14.32□□□□□ -0.12
RPL28-207ENST00000558815 SCUBE1Q8IWY4 988 aa14.32□□□□□ -0.12
RPL28-207ENST00000558815 ZNF595Q8IYB9 648 aa14.32□□□□□ -0.12
RPL28-207ENST00000558815 THAP3Q8WTV1 239 aaPredicted RBP14.32□□□□□ -0.12
RPL28-207ENST00000558815 MTFMTQ96DP5 389 aaKnown RBP14.32□□□□□ -0.12
RPL28-207ENST00000558815 NSUN5Q96P11 429 aaKnown RBP14.32□□□□□ -0.12
RPL28-207ENST00000558815 UTP23Q9BRU9 249 aaKnown RBP14.32□□□□□ -0.12
RPL28-207ENST00000558815 CENPKQ9BS16 269 aa14.32□□□□□ -0.12
RPL28-207ENST00000558815 RNF32Q9H0A6 362 aa14.32□□□□□ -0.12
RPL28-207ENST00000558815 MRPL46Q9H2W6 279 aaKnown RBP14.32□□□□□ -0.12
RPL28-207ENST00000558815 KLHL1Q9NR64 748 aa14.32□□□□□ -0.12
RPL28-207ENST00000558815 TBK1Q9UHD2 729 aa14.32□□□□□ -0.12
RPL28-207ENST00000558815 TMCO1Q9UM00 188 aa14.32□□□□□ -0.12
RPL28-207ENST00000558815 PCDHGA11Q9Y5H2 935 aa14.32□□□□□ -0.12
RPL28-207ENST00000558815 SPACA6W5XKT8 324 aa14.32□□□□□ -0.12
RPL28-207ENST00000558815 ESPL1Q14674 2120 aa14.32□□□□□ -0.12
RPL28-207ENST00000558815 TRBV11-1A0A0K0K1C0 115 aa14.31□□□□□ -0.12
RPL28-207ENST00000558815 BLACEA4D250 179 aa14.31□□□□□ -0.12
RPL28-207ENST00000558815 CLEC18AA5D8T8 446 aa14.31□□□□□ -0.12
RPL28-207ENST00000558815 GOLGA8RI6L899 631 aa14.31□□□□□ -0.12
RPL28-207ENST00000558815 CYR61O00622 381 aa14.31□□□□□ -0.12
RPL28-207ENST00000558815 OR7A17O14581 309 aa14.31□□□□□ -0.12
RPL28-207ENST00000558815 LDB3O75112 727 aa14.31□□□□□ -0.12
RPL28-207ENST00000558815 SEMA7AO75326 666 aa14.31□□□□□ -0.12
RPL28-207ENST00000558815 CLDN9O95484 217 aa14.31□□□□□ -0.12
RPL28-207ENST00000558815 MYBL2P10244 700 aa14.31□□□□□ -0.12
RPL28-207ENST00000558815 HIST1H1TP22492 207 aaPredicted RBP14.31□□□□□ -0.12
RPL28-207ENST00000558815 CPN2P22792 545 aa14.31□□□□□ -0.12
RPL28-207ENST00000558815 NEK2P51955 445 aa14.31□□□□□ -0.12
RPL28-207ENST00000558815 PMP22Q01453 160 aa14.31□□□□□ -0.12
RPL28-207ENST00000558815 ID2Q02363 134 aa14.31□□□□□ -0.12
RPL28-207ENST00000558815 STX4Q12846 297 aa14.31□□□□□ -0.12
RPL28-207ENST00000558815 SLAMF1Q13291 335 aa14.31□□□□□ -0.12
RPL28-207ENST00000558815 TUBA3CQ13748 450 aa14.31□□□□□ -0.12
RPL28-207ENST00000558815 ZRSR2Q15696 482 aaKnown RBP14.31□□□□□ -0.12
RPL28-207ENST00000558815 ZNF766Q5HY98 468 aa14.31□□□□□ -0.12
RPL28-207ENST00000558815 DEPDC1Q5TB30 811 aa14.31□□□□□ -0.12
RPL28-207ENST00000558815 TTC19Q6DKK2 380 aaPredicted RBP14.31□□□□□ -0.12
RPL28-207ENST00000558815 OR4C11Q6IEV9 310 aa14.31□□□□□ -0.12
RPL28-207ENST00000558815 RPUSD3Q6P087 351 aaKnown RBP14.31□□□□□ -0.12
RPL28-207ENST00000558815 TUBA3EQ6PEY2 450 aa14.31□□□□□ -0.12
RPL28-207ENST00000558815 ADGRD1Q6QNK2 874 aa14.31□□□□□ -0.12
RPL28-207ENST00000558815 CLEC18BQ6UXF7 455 aa14.31□□□□□ -0.12
RPL28-207ENST00000558815 RPS19BP1Q86WX3 136 aaKnown RBP14.31□□□□□ -0.12
RPL28-207ENST00000558815 BCORP1Q8N888 145 aa14.31□□□□□ -0.12
RPL28-207ENST00000558815 CLEC18CQ8NCF0 446 aa14.31□□□□□ -0.12
RPL28-207ENST00000558815 NFAM1Q8NET5 270 aaPredicted RBP14.31□□□□□ -0.12
RPL28-207ENST00000558815 OR52B6Q8NGF0 335 aa14.31□□□□□ -0.12
RPL28-207ENST00000558815 ELP5Q8TE02 316 aa14.31□□□□□ -0.12
RPL28-207ENST00000558815 FAR1Q8WVX9 515 aa14.31□□□□□ -0.12
RPL28-207ENST00000558815 RGMAQ96B86 450 aa14.31□□□□□ -0.12
RPL28-207ENST00000558815 REPS1Q96D71 796 aa14.31□□□□□ -0.12
RPL28-207ENST00000558815 SIGLEC12Q96PQ1 595 aa14.31□□□□□ -0.12
RPL28-207ENST00000558815 MRPL57Q9BQC6 102 aaKnown RBP14.31□□□□□ -0.12
RPL28-207ENST00000558815 HES7Q9BYE0 225 aa14.31□□□□□ -0.12
RPL28-207ENST00000558815 DEFB126Q9BYW3 111 aa14.31□□□□□ -0.12
RPL28-207ENST00000558815 SEMA4BQ9NPR2 832 aaPredicted RBP14.31□□□□□ -0.12
RPL28-207ENST00000558815 OLAHQ9NV23 265 aa14.31□□□□□ -0.12
RPL28-207ENST00000558815 ADGRE2Q9UHX3 823 aa14.31□□□□□ -0.12
RPL28-207ENST00000558815 PCTPQ9UKL6 214 aa14.31□□□□□ -0.12
RPL28-207ENST00000558815 CNTRLQ7Z7A1 2325 aa14.31□□□□□ -0.12
RPL28-207ENST00000558815 PRRC2CQ9Y520 2896 aaKnown RBP14.3□□□□□ -0.12
RPL28-207ENST00000558815 IQANK1A0A1B0GTG1 560 aa14.3□□□□□ -0.12
RPL28-207ENST00000558815 STX16-NPEPL1H3BU86 382 aa14.3□□□□□ -0.12
RPL28-207ENST00000558815 PLPP1O14494 284 aa14.3□□□□□ -0.12
RPL28-207ENST00000558815 STX16O14662 325 aa14.3□□□□□ -0.12
RPL28-207ENST00000558815 UGDHO60701 494 aa14.3□□□□□ -0.12
RPL28-207ENST00000558815 RASAL1O95294 804 aa14.3□□□□□ -0.12
RPL28-207ENST00000558815 TSPAN8P19075 237 aa14.3□□□□□ -0.12
RPL28-207ENST00000558815 CD96P40200 585 aa14.3□□□□□ -0.12
RPL28-207ENST00000558815 PIK3CBP42338 1070 aa14.3□□□□□ -0.12
RPL28-207ENST00000558815 CLCN2P51788 898 aa14.3□□□□□ -0.12
RPL28-207ENST00000558815 PCDH1Q08174 1060 aa14.3□□□□□ -0.12
RPL28-207ENST00000558815 OR1C1Q15619 314 aa14.3□□□□□ -0.12
RPL28-207ENST00000558815 B3GNT7Q8NFL0 401 aa14.3□□□□□ -0.12
RPL28-207ENST00000558815 UBLCP1Q8WVY7 318 aaPredicted RBP14.3□□□□□ -0.12
RPL28-207ENST00000558815 NCLNQ969V3 563 aa14.3□□□□□ -0.12
RPL28-207ENST00000558815 MTBPQ96DY7 904 aa14.3□□□□□ -0.12
RPL28-207ENST00000558815 TAAR6Q96RI8 345 aa14.3□□□□□ -0.12
RPL28-207ENST00000558815 ALOXE3Q9BYJ1 711 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms