RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 DNAJC15Q9Y5T4 150 aa9.82□□□□□ -0.84
TPM1-212ENST00000558347 C21orf140B9A014 251 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 PYCARD-AS1I3L0S3 204 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 PIP5K1BO14986 540 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 ANGPT2O15123 496 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 SLC28A2O43868 658 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 MLYCDO95822 493 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 NPPAP01160 153 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 ANXA5P08758 320 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 HIST1H2AGP0C0S8 130 aaPredicted RBP9.81□□□□□ -0.84
TPM1-212ENST00000558347 PRR35P0CG20 571 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 SFTPCP11686 197 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 FCGR1AP12314 374 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 TCN1P20061 433 aaPredicted RBP9.81□□□□□ -0.84
TPM1-212ENST00000558347 HIST1H2ADP20671 130 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 PKLRP30613 574 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 RORAP35398 523 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 GGT5P36269 586 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 HNMTP50135 292 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 SLC7A2P52569 658 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 TUBA4AP68366 448 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 PCBP2Q15366 365 aaKnown RBP eCLIP9.81□□□□□ -0.842e-12■■■■□ 19.4
TPM1-212ENST00000558347 DEFB110Q30KQ9 67 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 C6orf52Q5T4I8 152 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 CLEC6AQ6EIG7 209 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 ZNF517Q6ZMY9 492 aaPredicted RBP9.81□□□□□ -0.84
TPM1-212ENST00000558347 PRICKLE2Q7Z3G6 844 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 HOMEZQ8IX15 550 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 FAM20CQ8IXL6 584 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 GALNT4Q8N4A0 578 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 C19orf47Q8N9M1 422 aaKnown RBP9.81□□□□□ -0.84
TPM1-212ENST00000558347 LINC01555Q8NAE3 123 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 SKA2Q8WVK7 121 aaPredicted RBP9.81□□□□□ -0.84
TPM1-212ENST00000558347 APOBEC4Q8WW27 367 aaKnown RBP9.81□□□□□ -0.84
TPM1-212ENST00000558347 LRTOMTQ8WZ04 291 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 MR1Q95460 341 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 RHBDF1Q96CC6 855 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 HIST1H2AHQ96KK5 128 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 C3orf30Q96M34 536 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 IL17FQ96PD4 163 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 HIST1H2AJQ99878 128 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 H2AFJQ9BTM1 129 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 ANKRD60Q9BZ19 345 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 FAM117AQ9C073 453 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 PCDHAC1Q9H158 963 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 COQ10BQ9H8M1 238 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 MID1IP1Q9NPA3 183 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 PNPLA3Q9NST1 481 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 OR6C2Q9NZP2 312 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 ACTR3BQ9P1U1 418 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 TSR3Q9UJK0 312 aaKnown RBP9.81□□□□□ -0.84
TPM1-212ENST00000558347 KCNMB2Q9Y691 235 aa9.81□□□□□ -0.84
TPM1-212ENST00000558347 A0A0J9YY10 115 aa9.8□□□□□ -0.84
TPM1-212ENST00000558347 CDC14CA4D256 554 aa9.8□□□□□ -0.84
TPM1-212ENST00000558347 KRT87PA6NCN2 255 aa9.8□□□□□ -0.84
TPM1-212ENST00000558347 PABPN1LA6NDY0 278 aaKnown RBP9.8□□□□□ -0.84
TPM1-212ENST00000558347 NCF1BA6NI72 391 aaPredicted RBP9.8□□□□□ -0.84
TPM1-212ENST00000558347 NCF1CA8MVU1 366 aaPredicted RBP9.8□□□□□ -0.84
TPM1-212ENST00000558347 ARHGEF33A8MVX0 844 aa9.8□□□□□ -0.84
TPM1-212ENST00000558347 ISM1B1AKI9 464 aa9.8□□□□□ -0.84
TPM1-212ENST00000558347 H3BMH7 237 aa9.8□□□□□ -0.84
TPM1-212ENST00000558347 J3QKU1 62 aa9.8□□□□□ -0.84
TPM1-212ENST00000558347 MEN1O00255 615 aa9.8□□□□□ -0.84
TPM1-212ENST00000558347 NR5A2O00482 541 aa9.8□□□□□ -0.84
TPM1-212ENST00000558347 ZIC2O95409 532 aaPredicted RBP9.8□□□□□ -0.84
TPM1-212ENST00000558347 CHEK2O96017 543 aa9.8□□□□□ -0.84
TPM1-212ENST00000558347 GPIP06744 558 aa9.8□□□□□ -0.84
TPM1-212ENST00000558347 CTSBP07858 339 aa9.8□□□□□ -0.84
TPM1-212ENST00000558347 NCF1P14598 390 aaPredicted RBP9.8□□□□□ -0.84
TPM1-212ENST00000558347 ZNF23P17027 643 aa9.8□□□□□ -0.84
TPM1-212ENST00000558347 IL10P22301 178 aa9.8□□□□□ -0.84
TPM1-212ENST00000558347 EEF1DP29692 281 aaKnown RBP9.8□□□□□ -0.84
TPM1-212ENST00000558347 GABRA4P48169 554 aa9.8□□□□□ -0.84
TPM1-212ENST00000558347 RAB28P51157 221 aa9.8□□□□□ -0.84
TPM1-212ENST00000558347 CLCQ05315 142 aa9.8□□□□□ -0.84
TPM1-212ENST00000558347 IL10RAQ13651 578 aa9.8□□□□□ -0.84
TPM1-212ENST00000558347 CCSMST1Q4G0I0 132 aa9.8□□□□□ -0.84
TPM1-212ENST00000558347 NADK2Q4G0N4 442 aa9.8□□□□□ -0.84
TPM1-212ENST00000558347 PDCD4Q53EL6 469 aaKnown RBP9.8□□□□□ -0.84
TPM1-212ENST00000558347 FAM69BQ5VUD6 431 aa9.8□□□□□ -0.84
TPM1-212ENST00000558347 BLOC1S3Q6QNY0 202 aa9.8□□□□□ -0.84
TPM1-212ENST00000558347 RPS27LQ71UM5 84 aaKnown RBP9.8□□□□□ -0.84
TPM1-212ENST00000558347 DCUN1D3Q8IWE4 304 aa9.8□□□□□ -0.84
TPM1-212ENST00000558347 KLHDC8AQ8IYD2 350 aa9.8□□□□□ -0.84
TPM1-212ENST00000558347 C2orf73Q8N5S3 287 aaPredicted RBP9.8□□□□□ -0.84
TPM1-212ENST00000558347 FAM156AQ8NDB6 213 aa9.8□□□□□ -0.84
TPM1-212ENST00000558347 FBXL8Q96CD0 374 aa9.8□□□□□ -0.84
TPM1-212ENST00000558347 CLIP3Q96DZ5 547 aa9.8□□□□□ -0.84
TPM1-212ENST00000558347 CCDC138Q96M89 665 aa9.8□□□□□ -0.84
TPM1-212ENST00000558347 LRFN5Q96NI6 719 aa9.8□□□□□ -0.84
TPM1-212ENST00000558347 CHST8Q9H2A9 424 aa9.8□□□□□ -0.84
TPM1-212ENST00000558347 ARL15Q9NXU5 204 aa9.8□□□□□ -0.84
TPM1-212ENST00000558347 TUBA8Q9NY65 449 aaPredicted RBP9.8□□□□□ -0.84
TPM1-212ENST00000558347 MAP10Q9P2G4 905 aa9.8□□□□□ -0.84
TPM1-212ENST00000558347 TUBD1Q9UJT1 453 aa9.8□□□□□ -0.84
TPM1-212ENST00000558347 PCTPQ9UKL6 214 aa9.8□□□□□ -0.84
TPM1-212ENST00000558347 POLHQ9Y253 713 aa9.8□□□□□ -0.84
TPM1-212ENST00000558347 FARSAQ9Y285 508 aaKnown RBP9.8□□□□□ -0.84
TPM1-212ENST00000558347 HEMK1Q9Y5R4 338 aaPredicted RBP9.8□□□□□ -0.84
TPM1-212ENST00000558347 A0A1W2PP18 115 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms