RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 FCRL4Q96PJ5 515 aa10.06□□□□□ -0.8
TPM1-210ENST00000558264 KCNC2Q96PR1 638 aa10.06□□□□□ -0.8
TPM1-210ENST00000558264 TEFMQ96QE5 360 aaKnown RBP10.06□□□□□ -0.8
TPM1-210ENST00000558264 CDCA3Q99618 268 aaPredicted RBP10.06□□□□□ -0.8
TPM1-210ENST00000558264 DOHHQ9BU89 302 aa10.06□□□□□ -0.8
TPM1-210ENST00000558264 APOOQ9BUR5 198 aa10.06□□□□□ -0.8
TPM1-210ENST00000558264 C1QTNF2Q9BXJ5 285 aa10.06□□□□□ -0.8
TPM1-210ENST00000558264 LHPPQ9H008 270 aa10.06□□□□□ -0.8
TPM1-210ENST00000558264 BTBD1Q9H0C5 482 aa10.06□□□□□ -0.8
TPM1-210ENST00000558264 RLIMQ9NVW2 624 aa10.06□□□□□ -0.8
TPM1-210ENST00000558264 NDUFAF4Q9P032 175 aa10.06□□□□□ -0.8
TPM1-210ENST00000558264 CORO2BQ9UQ03 480 aa10.06□□□□□ -0.8
TPM1-210ENST00000558264 CKAP5Q14008 2032 aa10.06□□□□□ -0.8
TPM1-210ENST00000558264 A0A1W2PPW3 197 aa10.06□□□□□ -0.8
TPM1-210ENST00000558264 PRAMEF10O60809 474 aa10.06□□□□□ -0.8
TPM1-210ENST00000558264 B4GALT2O60909 372 aa10.06□□□□□ -0.8
TPM1-210ENST00000558264 NME6O75414 186 aaPredicted RBP10.06□□□□□ -0.8
TPM1-210ENST00000558264 POU2F1P14859 743 aa10.06□□□□□ -0.8
TPM1-210ENST00000558264 CD72P21854 359 aa10.06□□□□□ -0.8
TPM1-210ENST00000558264 BCL6P41182 706 aa10.06□□□□□ -0.8
TPM1-210ENST00000558264 SSR2P43308 183 aa10.06□□□□□ -0.8
TPM1-210ENST00000558264 SELENOWP63302 87 aa10.06□□□□□ -0.8
TPM1-210ENST00000558264 SPIBQ01892 262 aa10.06□□□□□ -0.8
TPM1-210ENST00000558264 ZNF750Q32MQ0 723 aa10.06□□□□□ -0.8
TPM1-210ENST00000558264 SPDYE7PQ495Y7 208 aa10.06□□□□□ -0.8
TPM1-210ENST00000558264 BROXQ5VW32 411 aa10.06□□□□□ -0.8
TPM1-210ENST00000558264 KDM4DQ6B0I6 523 aa10.06□□□□□ -0.8
TPM1-210ENST00000558264 XAF1Q6GPH4 301 aa10.06□□□□□ -0.8
TPM1-210ENST00000558264 KIAA1324Q6UXG2 1013 aaKnown RBP10.06□□□□□ -0.8
TPM1-210ENST00000558264 CEACAM20Q6UY09 585 aa10.06□□□□□ -0.8
TPM1-210ENST00000558264 SPARTQ8N0X7 666 aa10.06□□□□□ -0.8
TPM1-210ENST00000558264 PGBD3Q8N328 593 aa10.06□□□□□ -0.8
TPM1-210ENST00000558264 HORMAD2Q8N7B1 307 aa10.06□□□□□ -0.8
TPM1-210ENST00000558264 TTC29Q8NA56 475 aaPredicted RBP10.06□□□□□ -0.8
TPM1-210ENST00000558264 GOT1L1Q8NHS2 421 aaPredicted RBP10.06□□□□□ -0.8
TPM1-210ENST00000558264 TSACCQ96A04 125 aaPredicted RBP10.06□□□□□ -0.8
TPM1-210ENST00000558264 RDH12Q96NR8 316 aa10.06□□□□□ -0.8
TPM1-210ENST00000558264 LMAN2LQ9H0V9 348 aa10.06□□□□□ -0.8
TPM1-210ENST00000558264 WASH6PQ9NQA3 447 aa10.06□□□□□ -0.8
TPM1-210ENST00000558264 ACSL5Q9ULC5 683 aa10.06□□□□□ -0.8
TPM1-210ENST00000558264 ICKQ9UPZ9 632 aa10.06□□□□□ -0.8
TPM1-210ENST00000558264 GMPPBQ9Y5P6 360 aa10.06□□□□□ -0.8
TPM1-210ENST00000558264 SNRNP200O75643 2136 aaKnown RBP10.06□□□□□ -0.8
TPM1-210ENST00000558264 KNL1Q8NG31 2342 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 A0A1W2PS29 197 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 H3BMQ9 156 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 M0R129 80 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 HAT1O14929 419 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 CAPN5O15484 640 aaPredicted RBP10.05□□□□□ -0.8
TPM1-210ENST00000558264 PLRG1O43660 514 aaKnown RBP10.05□□□□□ -0.8
TPM1-210ENST00000558264 BCHEP06276 602 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 PCSK2P16519 638 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 DDCP20711 480 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 CD247P20963 164 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 STT3AP46977 705 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 RAB28P51157 221 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 LRRC74AQ0VAA2 488 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 CDK5R2Q13319 367 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 TP53BP2Q13625 1128 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 ARHGAP19Q14CB8 494 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 FGD3Q5JSP0 725 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 TRIM40Q6P9F5 258 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 ZNF793Q6ZN11 406 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 FLCNQ8NFG4 579 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 ABHD11Q8NFV4 315 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 COG8Q96MW5 612 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 S1PR5Q9H228 398 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 PELI2Q9HAT8 420 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 SLC6A20Q9NP91 592 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 AHSPQ9NZD4 102 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 CCDC88CQ9P219 2028 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.05□□□□□ -0.8
TPM1-210ENST00000558264 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.05□□□□□ -0.8
TPM1-210ENST00000558264 FAM227AF5H4B4 570 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 TNFRSF11BO00300 401 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 PDPK1O15530 556 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 ANGPTL1O95841 491 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 C8orf89P0DMQ9 161 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 CTHP32929 405 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 ACSL1P33121 698 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 RAB8AP61006 207 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 SNRPNP63162 240 aaKnown RBP10.05□□□□□ -0.8
TPM1-210ENST00000558264 PRDX1Q06830 199 aaKnown RBP10.05□□□□□ -0.8
TPM1-210ENST00000558264 EPS8Q12929 822 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 SDE2Q6IQ49 451 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 ENPP7Q6UWV6 458 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 B3GNT8Q7Z7M8 397 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 CCDC71Q8IV32 467 aaPredicted RBP10.05□□□□□ -0.8
TPM1-210ENST00000558264 OR4E2Q8NGC2 313 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 OR9Q2Q8NGE9 314 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 OR8K5Q8NH50 307 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 ADAMTS16Q8TE57 1224 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 HDAC2Q92769 488 aaKnown RBP10.05□□□□□ -0.8
TPM1-210ENST00000558264 YIPF4Q9BSR8 244 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 NLNQ9BYT8 704 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 KLHL25Q9H0H3 589 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 RHBGQ9H310 441 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 TBC1D29Q9UFV1 150 aa10.05□□□□□ -0.8
TPM1-210ENST00000558264 WARS2Q9UGM6 360 aaKnown RBP10.05□□□□□ -0.8
TPM1-210ENST00000558264 MAPRE3Q9UPY8 281 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms