RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 SOX3P41225 446 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 CCR8P51685 355 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 CLCN7P51798 805 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 GPR143P51810 404 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 GDF10P55107 478 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 SESN2P58004 480 aaPredicted RBP4.79□□□□□ -1.64
SPG11-208ENST00000558155 SORDQ00796 357 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 FOXO1Q12778 655 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 CBLBQ13191 982 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 NAE1Q13564 534 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 SIX1Q15475 284 aaPredicted RBP4.79□□□□□ -1.64
SPG11-208ENST00000558155 SPA17Q15506 151 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 SLC22A10Q63ZE4 541 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 HMBOX1Q6NT76 420 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 AADACL2Q6P093 401 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 PODNL1Q6PEZ8 512 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 AGTRAPQ6RW13 159 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 LCTLQ6UWM7 567 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 HSDL2Q6YN16 418 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 CYHR1Q6ZMK1 362 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 UBE2R2Q712K3 238 aaPredicted RBP4.79□□□□□ -1.64
SPG11-208ENST00000558155 YTHDF3Q7Z739 585 aaKnown RBP4.79□□□□□ -1.64
SPG11-208ENST00000558155 STRA8Q7Z7C7 330 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 LACC1Q8IV20 430 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 ULK2Q8IYT8 1036 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 LINC00528Q8N1L1 170 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 LIX1Q8N485 282 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 MEIOBQ8N635 442 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 PRELID2Q8N945 189 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 RELL2Q8NC24 303 aaPredicted RBP4.79□□□□□ -1.64
SPG11-208ENST00000558155 ZNF740Q8NDX6 193 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 ABHD11Q8NFV4 315 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 TNIP2Q8NFZ5 429 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 OR4K1Q8NGD4 311 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 SLC35B2Q8TB61 432 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 NT5CQ8TCD5 201 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 UTP15Q8TED0 518 aaKnown RBP4.79□□□□□ -1.64
SPG11-208ENST00000558155 TMEM158Q8WZ71 300 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 SMPDL3BQ92485 455 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 LPGAT1Q92604 370 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 DAZLQ92904 295 aaKnown RBP4.79□□□□□ -1.64
SPG11-208ENST00000558155 ISL2Q96A47 359 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 SCYL1Q96KG9 808 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 HIST1H2AHQ96KK5 128 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 CAPZA3Q96KX2 299 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 RASL10BQ96S79 203 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 HIST1H2AJQ99878 128 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 HAUS8Q9BT25 410 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 H2AFJQ9BTM1 129 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 IL22Q9GZX6 179 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 CCDC68Q9H2F9 335 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 LIN28AQ9H9Z2 209 aaKnown RBP4.79□□□□□ -1.64
SPG11-208ENST00000558155 ACKR4Q9NPB9 350 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 PRTFDC1Q9NRG1 225 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 RAB6BQ9NRW1 208 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 QPCTLQ9NXS2 382 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 TUBA8Q9NY65 449 aaPredicted RBP4.79□□□□□ -1.64
SPG11-208ENST00000558155 GALPQ9UBC7 116 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 NDRG3Q9UGV2 375 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 ADAM21Q9UKJ8 722 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 ZNF148Q9UQR1 794 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 DHRS7Q9Y394 339 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 CLCA3PQ9Y6N3 262 aa4.79□□□□□ -1.64
SPG11-208ENST00000558155 A0A0G2JMM0 328 aa4.78□□□□□ -1.64
SPG11-208ENST00000558155 A0A1W2PPB8 328 aa4.78□□□□□ -1.64
SPG11-208ENST00000558155 A0A1W2PRS3 328 aa4.78□□□□□ -1.64
SPG11-208ENST00000558155 TRBC2A0A5B9 178 aa4.78□□□□□ -1.64
SPG11-208ENST00000558155 CTAGE9A4FU28 777 aa4.78□□□□□ -1.64
SPG11-208ENST00000558155 PABPN1LA6NDY0 278 aaKnown RBP4.78□□□□□ -1.64
SPG11-208ENST00000558155 KIR3DP1A8MWS1 328 aa4.78□□□□□ -1.64
SPG11-208ENST00000558155 GOLGA8KD6RF30 607 aa4.78□□□□□ -1.64
SPG11-208ENST00000558155 GOLGA8TH3BQL2 631 aa4.78□□□□□ -1.64
SPG11-208ENST00000558155 EIF3FO00303 357 aaPredicted RBP4.78□□□□□ -1.64
SPG11-208ENST00000558155 IL18BPO95998 194 aa4.78□□□□□ -1.64
SPG11-208ENST00000558155 B3GALT4O96024 378 aa4.78□□□□□ -1.64
SPG11-208ENST00000558155 IFNA16P05015 189 aa4.78□□□□□ -1.64
SPG11-208ENST00000558155 CELA3AP09093 270 aa4.78□□□□□ -1.64
SPG11-208ENST00000558155 SMIM10L1P0DMW3 83 aa4.78□□□□□ -1.64
SPG11-208ENST00000558155 BMP2P12643 396 aa4.78□□□□□ -1.64
SPG11-208ENST00000558155 CDH1P12830 882 aa4.78□□□□□ -1.64
SPG11-208ENST00000558155 PAMP19021 973 aa4.78□□□□□ -1.64
SPG11-208ENST00000558155 TNNI3P19429 210 aa4.78□□□□□ -1.64
SPG11-208ENST00000558155 OGNP20774 298 aaKnown RBP4.78□□□□□ -1.64
SPG11-208ENST00000558155 AHRP35869 848 aa4.78□□□□□ -1.64
SPG11-208ENST00000558155 HNF4AP41235 474 aa4.78□□□□□ -1.64
SPG11-208ENST00000558155 DNASE1L1P49184 302 aa4.78□□□□□ -1.64
SPG11-208ENST00000558155 HSD17B7P56937 341 aa4.78□□□□□ -1.64
SPG11-208ENST00000558155 RAB8AP61006 207 aa4.78□□□□□ -1.64
SPG11-208ENST00000558155 TBPL1P62380 186 aa4.78□□□□□ -1.64
SPG11-208ENST00000558155 EEF1A1P68104 462 aaKnown RBP4.78□□□□□ -1.64
SPG11-208ENST00000558155 CRADDP78560 199 aa4.78□□□□□ -1.64
SPG11-208ENST00000558155 SLC13A2Q13183 592 aa4.78□□□□□ -1.64
SPG11-208ENST00000558155 RCN2Q14257 317 aa4.78□□□□□ -1.64
SPG11-208ENST00000558155 CSHL1Q14406 222 aa4.78□□□□□ -1.64
SPG11-208ENST00000558155 POU4F3Q15319 338 aa4.78□□□□□ -1.64
SPG11-208ENST00000558155 ACKR1Q16570 336 aa4.78□□□□□ -1.64
SPG11-208ENST00000558155 EEF1A1P5Q5VTE0 462 aa4.78□□□□□ -1.64
SPG11-208ENST00000558155 KIAA0930Q6ICG6 404 aaPredicted RBP4.78□□□□□ -1.64
SPG11-208ENST00000558155 LRRC8EQ6NSJ5 796 aa4.78□□□□□ -1.64
SPG11-208ENST00000558155 UGT3A1Q6NUS8 523 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms