RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 KLK1P06870 262 aa13.5□□□□□ -0.25
USP3-205ENST00000557884 FAM87AP0C7U9 286 aa13.5□□□□□ -0.25
USP3-205ENST00000557884 C8orf89P0DMQ9 161 aa13.5□□□□□ -0.25
USP3-205ENST00000557884 ACPPP15309 386 aa13.5□□□□□ -0.25
USP3-205ENST00000557884 IL10P22301 178 aa13.5□□□□□ -0.25
USP3-205ENST00000557884 JAK1P23458 1154 aa13.5□□□□□ -0.25
USP3-205ENST00000557884 ARRB2P32121 409 aa13.5□□□□□ -0.25
USP3-205ENST00000557884 BSGP35613 385 aa13.5□□□□□ -0.25
USP3-205ENST00000557884 HNRNPFP52597 415 aaKnown RBP13.5□□□□□ -0.25
USP3-205ENST00000557884 WDR4P57081 412 aaKnown RBP13.5□□□□□ -0.25
USP3-205ENST00000557884 BTG2P78543 158 aa13.5□□□□□ -0.25
USP3-205ENST00000557884 HMGCS1Q01581 520 aa13.5□□□□□ -0.25
USP3-205ENST00000557884 RHAGQ02094 409 aa13.5□□□□□ -0.25
USP3-205ENST00000557884 LINC00303Q3SY05 128 aa13.5□□□□□ -0.25
USP3-205ENST00000557884 CES4AQ5XG92 561 aa13.5□□□□□ -0.25
USP3-205ENST00000557884 EFCAB3Q8N7B9 438 aa13.5□□□□□ -0.25
USP3-205ENST00000557884 OR11G2Q8NGC1 345 aa13.5□□□□□ -0.25
USP3-205ENST00000557884 METTL21AQ8WXB1 218 aa13.5□□□□□ -0.25
USP3-205ENST00000557884 ATP6V1G3Q96LB4 118 aa13.5□□□□□ -0.25
USP3-205ENST00000557884 IP6K3Q96PC2 410 aa13.5□□□□□ -0.25
USP3-205ENST00000557884 SH3GL2Q99962 352 aa13.5□□□□□ -0.25
USP3-205ENST00000557884 ARHGAP9Q9BRR9 750 aa13.5□□□□□ -0.25
USP3-205ENST00000557884 TRIM55Q9BYV6 548 aa13.5□□□□□ -0.25
USP3-205ENST00000557884 ACPTQ9BZG2 426 aa13.5□□□□□ -0.25
USP3-205ENST00000557884 ING2Q9H160 280 aa13.5□□□□□ -0.25
USP3-205ENST00000557884 BRF2Q9HAW0 419 aa13.5□□□□□ -0.25
USP3-205ENST00000557884 NKIRAS1Q9NYS0 192 aa13.5□□□□□ -0.25
USP3-205ENST00000557884 DAPP1Q9UN19 280 aa13.5□□□□□ -0.25
USP3-205ENST00000557884 PIEZO2Q9H5I5 2752 aa13.49□□□□□ -0.25
USP3-205ENST00000557884 IGHV3-20A0A0C4DH32 117 aa13.49□□□□□ -0.25
USP3-205ENST00000557884 A6NL46 340 aa13.49□□□□□ -0.25
USP3-205ENST00000557884 H3BQF6 201 aa13.49□□□□□ -0.25
USP3-205ENST00000557884 AZIN1O14977 448 aa13.49□□□□□ -0.25
USP3-205ENST00000557884 ITM2AO43736 263 aa13.49□□□□□ -0.25
USP3-205ENST00000557884 TMPRSS11DO60235 418 aa13.49□□□□□ -0.25
USP3-205ENST00000557884 PRMT3O60678 531 aa13.49□□□□□ -0.25
USP3-205ENST00000557884 LYPLA1O75608 230 aaPredicted RBP13.49□□□□□ -0.25
USP3-205ENST00000557884 SERPINE1P05121 402 aa13.49□□□□□ -0.25
USP3-205ENST00000557884 UROSP10746 265 aa13.49□□□□□ -0.25
USP3-205ENST00000557884 MAOAP21397 527 aa13.49□□□□□ -0.25
USP3-205ENST00000557884 CCL11P51671 97 aa13.49□□□□□ -0.25
USP3-205ENST00000557884 POLE2P56282 527 aa13.49□□□□□ -0.25
USP3-205ENST00000557884 BTKQ06187 659 aa13.49□□□□□ -0.25
USP3-205ENST00000557884 TBL3Q12788 808 aaKnown RBP13.49□□□□□ -0.25
USP3-205ENST00000557884 CSTF3Q12996 717 aaKnown RBP13.49□□□□□ -0.25
USP3-205ENST00000557884 NSDHLQ15738 373 aa13.49□□□□□ -0.25
USP3-205ENST00000557884 SH2D4BQ5SQS7 431 aa13.49□□□□□ -0.25
USP3-205ENST00000557884 CYP20A1Q6UW02 462 aa13.49□□□□□ -0.25
USP3-205ENST00000557884 ATG14Q6ZNE5 492 aa13.49□□□□□ -0.25
USP3-205ENST00000557884 COMMD6Q7Z4G1 85 aa13.49□□□□□ -0.25
USP3-205ENST00000557884 CLNKQ7Z7G1 428 aa13.49□□□□□ -0.25
USP3-205ENST00000557884 NUDT13Q86X67 352 aa13.49□□□□□ -0.25
USP3-205ENST00000557884 METTL4Q8N3J2 472 aa13.49□□□□□ -0.25
USP3-205ENST00000557884 ZCCHC7Q8N3Z6 543 aaKnown RBP13.49□□□□□ -0.25
USP3-205ENST00000557884 AMER2Q8N7J2 671 aa13.49□□□□□ -0.25
USP3-205ENST00000557884 OR6Y1Q8NGX8 325 aa13.49□□□□□ -0.25
USP3-205ENST00000557884 PTCHD1Q96NR3 888 aa13.49□□□□□ -0.25
USP3-205ENST00000557884 DDX31Q9H8H2 851 aaKnown RBP13.49□□□□□ -0.25
USP3-205ENST00000557884 ZNF395Q9H8N7 513 aaPredicted RBP13.49□□□□□ -0.25
USP3-205ENST00000557884 EML4Q9HC35 981 aaKnown RBP13.49□□□□□ -0.25
USP3-205ENST00000557884 LYRM4Q9HD34 91 aa13.49□□□□□ -0.25
USP3-205ENST00000557884 ZNF446Q9NWS9 450 aa13.49□□□□□ -0.25
USP3-205ENST00000557884 AHSPQ9NZD4 102 aa13.49□□□□□ -0.25
USP3-205ENST00000557884 KCMF1Q9P0J7 381 aa13.49□□□□□ -0.25
USP3-205ENST00000557884 VPS29Q9UBQ0 182 aa13.49□□□□□ -0.25
USP3-205ENST00000557884 PTGDR2Q9Y5Y4 395 aa13.49□□□□□ -0.25
USP3-205ENST00000557884 PCSK5Q92824 1860 aa13.48□□□□□ -0.25
USP3-205ENST00000557884 SCN3AQ9NY46 2000 aa13.48□□□□□ -0.25
USP3-205ENST00000557884 A0A0A6YYD5 115 aa13.48□□□□□ -0.25
USP3-205ENST00000557884 MYOCOSA0A1B0GUC4 107 aa13.48□□□□□ -0.25
USP3-205ENST00000557884 ERVH48-1M5A8F1 160 aa13.48□□□□□ -0.25
USP3-205ENST00000557884 CYR61O00622 381 aa13.48□□□□□ -0.25
USP3-205ENST00000557884 PRKRAO75569 313 aaKnown RBP13.48□□□□□ -0.25
USP3-205ENST00000557884 HSPA4LO95757 839 aa13.48□□□□□ -0.25
USP3-205ENST00000557884 FAM58BPP0C7Q3 252 aa13.48□□□□□ -0.25
USP3-205ENST00000557884 COX6A1P12074 109 aa13.48□□□□□ -0.25
USP3-205ENST00000557884 HSD3B1P14060 373 aa13.48□□□□□ -0.25
USP3-205ENST00000557884 CPN2P22792 545 aa13.48□□□□□ -0.25
USP3-205ENST00000557884 HSD3B2P26439 372 aa13.48□□□□□ -0.25
USP3-205ENST00000557884 TSFMP43897 325 aaKnown RBP13.48□□□□□ -0.25
USP3-205ENST00000557884 RRADP55042 308 aa13.48□□□□□ -0.25
USP3-205ENST00000557884 HNRNPH2P55795 449 aaKnown RBP13.48□□□□□ -0.25
USP3-205ENST00000557884 GALNT1Q10472 559 aaPredicted RBP13.48□□□□□ -0.25
USP3-205ENST00000557884 SLC13A2Q13183 592 aa13.48□□□□□ -0.25
USP3-205ENST00000557884 RAPSNQ13702 412 aa13.48□□□□□ -0.25
USP3-205ENST00000557884 IMPG1Q17R60 797 aa13.48□□□□□ -0.25
USP3-205ENST00000557884 SPDYAQ5MJ70 313 aa13.48□□□□□ -0.25
USP3-205ENST00000557884 DCAF10Q5QP82 559 aa13.48□□□□□ -0.25
USP3-205ENST00000557884 C18orf63Q68DL7 685 aa13.48□□□□□ -0.25
USP3-205ENST00000557884 PCSK4Q6UW60 755 aa13.48□□□□□ -0.25
USP3-205ENST00000557884 TMEM205Q6UW68 189 aa13.48□□□□□ -0.25
USP3-205ENST00000557884 QSOX2Q6ZRP7 698 aa13.48□□□□□ -0.25
USP3-205ENST00000557884 ANKRD37Q7Z713 158 aa13.48□□□□□ -0.25
USP3-205ENST00000557884 C1orf52Q8N6N3 182 aaKnown RBP13.48□□□□□ -0.25
USP3-205ENST00000557884 GBP7Q8N8V2 638 aaPredicted RBP13.48□□□□□ -0.25
USP3-205ENST00000557884 PLPP5Q8NEB5 264 aa13.48□□□□□ -0.25
USP3-205ENST00000557884 ADAMTS18Q8TE60 1221 aa13.48□□□□□ -0.25
USP3-205ENST00000557884 APIPQ96GX9 242 aa13.48□□□□□ -0.25
USP3-205ENST00000557884 FER1L6-AS2Q96M78 137 aa13.48□□□□□ -0.25
USP3-205ENST00000557884 ZNF160Q9HCG1 818 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms