RNA–Protein interactions for RNA: ENST00000557764.5

TRAPPC6B-207, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 2

Gene TRAPPC6B, Length 870 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-207ENST00000557764 ZNF701Q9NV72 531 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC6B-207ENST00000557764 GALPQ9UBC7 116 aa13.16□□□□□ -0.3
TRAPPC6B-207ENST00000557764 RIMKLBQ9ULI2 386 aa13.16□□□□□ -0.3
TRAPPC6B-207ENST00000557764 CAPN11Q9UMQ6 739 aa13.16□□□□□ -0.3
TRAPPC6B-207ENST00000557764 CAMK2AQ9UQM7 478 aa13.16□□□□□ -0.3
TRAPPC6B-207ENST00000557764 GTF3C3Q9Y5Q9 886 aa13.16□□□□□ -0.3
TRAPPC6B-207ENST00000557764 PSMD3O43242 534 aa13.15□□□□□ -0.3
TRAPPC6B-207ENST00000557764 GAS8O95995 478 aa13.15□□□□□ -0.3
TRAPPC6B-207ENST00000557764 SERPIND1P05546 499 aa13.15□□□□□ -0.3
TRAPPC6B-207ENST00000557764 ADRA1DP25100 572 aa13.15□□□□□ -0.3
TRAPPC6B-207ENST00000557764 GRK3P35626 688 aa13.15□□□□□ -0.3
TRAPPC6B-207ENST00000557764 MC3RP41968 323 aa13.15□□□□□ -0.3
TRAPPC6B-207ENST00000557764 KCNJ2P63252 427 aa13.15□□□□□ -0.3
TRAPPC6B-207ENST00000557764 CDH17Q12864 832 aa13.15□□□□□ -0.3
TRAPPC6B-207ENST00000557764 BMPR2Q13873 1038 aa13.15□□□□□ -0.3
TRAPPC6B-207ENST00000557764 RPS6KA1Q15418 735 aa13.15□□□□□ -0.3
TRAPPC6B-207ENST00000557764 NIPAL1Q6NVV3 410 aa13.15□□□□□ -0.3
TRAPPC6B-207ENST00000557764 LINC00523Q86TU6 105 aa13.15□□□□□ -0.3
TRAPPC6B-207ENST00000557764 LRRC25Q8N386 305 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC6B-207ENST00000557764 C9orf106Q8NAJ2 232 aa13.15□□□□□ -0.3
TRAPPC6B-207ENST00000557764 WFIKKN1Q96NZ8 548 aa13.15□□□□□ -0.3
TRAPPC6B-207ENST00000557764 PLA2G12AQ9BZM1 189 aa13.15□□□□□ -0.3
TRAPPC6B-207ENST00000557764 PRDM14Q9GZV8 571 aa13.15□□□□□ -0.3
TRAPPC6B-207ENST00000557764 CXorf56Q9H5V9 222 aa13.15□□□□□ -0.3
TRAPPC6B-207ENST00000557764 CCDC177Q9NQR7 707 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC6B-207ENST00000557764 KLHL28Q9NXS3 571 aa13.15□□□□□ -0.3
TRAPPC6B-207ENST00000557764 BOKQ9UMX3 212 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC6B-207ENST00000557764 LRRC3CA6NJW4 275 aa13.14□□□□□ -0.31
TRAPPC6B-207ENST00000557764 CHRM3P20309 590 aa13.14□□□□□ -0.31
TRAPPC6B-207ENST00000557764 IMPA1P29218 277 aa13.14□□□□□ -0.31
TRAPPC6B-207ENST00000557764 FMO4P31512 558 aa13.14□□□□□ -0.31
TRAPPC6B-207ENST00000557764 TBPL1P62380 186 aa13.14□□□□□ -0.31
TRAPPC6B-207ENST00000557764 PRAMEF20Q5VT98 475 aa13.14□□□□□ -0.31
TRAPPC6B-207ENST00000557764 OPN5Q6U736 354 aa13.14□□□□□ -0.31
TRAPPC6B-207ENST00000557764 MED12LQ86YW9 2145 aa13.14□□□□□ -0.31
TRAPPC6B-207ENST00000557764 REXO1L1PQ8IX06 675 aa13.14□□□□□ -0.31
TRAPPC6B-207ENST00000557764 ZNF441Q8N8Z8 693 aa13.14□□□□□ -0.31
TRAPPC6B-207ENST00000557764 NTNG2Q96CW9 530 aa13.14□□□□□ -0.31
TRAPPC6B-207ENST00000557764 ZBED6CLQ96FA7 236 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC6B-207ENST00000557764 JSRP1Q96MG2 331 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC6B-207ENST00000557764 BIRC8Q96P09 236 aa13.14□□□□□ -0.31
TRAPPC6B-207ENST00000557764 RBSNQ9H1K0 784 aa13.14□□□□□ -0.31
TRAPPC6B-207ENST00000557764 GOLPH3Q9H4A6 298 aa13.14□□□□□ -0.31
TRAPPC6B-207ENST00000557764 LRTM1Q9HBL6 345 aa13.14□□□□□ -0.31
TRAPPC6B-207ENST00000557764 QPCTLQ9NXS2 382 aa13.14□□□□□ -0.31
TRAPPC6B-207ENST00000557764 ZNF226Q9NYT6 803 aa13.14□□□□□ -0.31
TRAPPC6B-207ENST00000557764 CDC42EP3Q9UKI2 254 aa13.14□□□□□ -0.31
TRAPPC6B-207ENST00000557764 MMACHCQ9Y4U1 282 aa13.14□□□□□ -0.31
TRAPPC6B-207ENST00000557764 TGFBR3LH3BV60 316 aa13.13□□□□□ -0.31
TRAPPC6B-207ENST00000557764 OR1F1O43749 312 aa13.13□□□□□ -0.31
TRAPPC6B-207ENST00000557764 CRYGSP22914 178 aa13.13□□□□□ -0.31
TRAPPC6B-207ENST00000557764 CPOXP36551 454 aa13.13□□□□□ -0.31
TRAPPC6B-207ENST00000557764 RAB8AP61006 207 aa13.13□□□□□ -0.31
TRAPPC6B-207ENST00000557764 PWP1Q13610 501 aa13.13□□□□□ -0.31
TRAPPC6B-207ENST00000557764 SLC22A10Q63ZE4 541 aa13.13□□□□□ -0.31
TRAPPC6B-207ENST00000557764 SYDE1Q6ZW31 735 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC6B-207ENST00000557764 C17orf64Q86WR6 236 aa13.13□□□□□ -0.31
TRAPPC6B-207ENST00000557764 CA13Q8N1Q1 262 aa13.13□□□□□ -0.31
TRAPPC6B-207ENST00000557764 UTP15Q8TED0 518 aaKnown RBP13.13□□□□□ -0.31
TRAPPC6B-207ENST00000557764 SFXN3Q9BWM7 321 aa13.13□□□□□ -0.31
TRAPPC6B-207ENST00000557764 CALHM2Q9HA72 323 aa13.13□□□□□ -0.31
TRAPPC6B-207ENST00000557764 CLK4Q9HAZ1 481 aaKnown RBP13.13□□□□□ -0.31
TRAPPC6B-207ENST00000557764 ZNF148Q9UQR1 794 aa13.13□□□□□ -0.31
TRAPPC6B-207ENST00000557764 TCAF1Q9Y4C2 921 aa13.13□□□□□ -0.31
TRAPPC6B-207ENST00000557764 PKD1L1Q8TDX9 2849 aa13.13□□□□□ -0.31
TRAPPC6B-207ENST00000557764 CDH1P12830 882 aa13.12□□□□□ -0.31
TRAPPC6B-207ENST00000557764 GDF1P27539 372 aa13.12□□□□□ -0.31
TRAPPC6B-207ENST00000557764 HNF4AP41235 474 aa13.12□□□□□ -0.31
TRAPPC6B-207ENST00000557764 SKIV2L2P42285 1042 aaKnown RBP13.12□□□□□ -0.31
TRAPPC6B-207ENST00000557764 PHKG1Q16816 387 aa13.12□□□□□ -0.31
TRAPPC6B-207ENST00000557764 ASTE1Q2TB18 679 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC6B-207ENST00000557764 P3H1Q32P28 736 aa13.12□□□□□ -0.31
TRAPPC6B-207ENST00000557764 SCUBE1Q8IWY4 988 aa13.12□□□□□ -0.31
TRAPPC6B-207ENST00000557764 TMEM132CQ8N3T6 1108 aa13.12□□□□□ -0.31
TRAPPC6B-207ENST00000557764 ZNF321PQ8N8H1 164 aa13.12□□□□□ -0.31
TRAPPC6B-207ENST00000557764 FAM71DQ8N9W8 422 aa13.12□□□□□ -0.31
TRAPPC6B-207ENST00000557764 PPHLN1Q8NEY8 458 aaKnown RBP13.12□□□□□ -0.31
TRAPPC6B-207ENST00000557764 ROBO4Q8WZ75 1007 aa13.12□□□□□ -0.31
TRAPPC6B-207ENST00000557764 KRT35Q92764 455 aa13.12□□□□□ -0.31
TRAPPC6B-207ENST00000557764 PCBD2Q9H0N5 130 aa13.12□□□□□ -0.31
TRAPPC6B-207ENST00000557764 SH2D2AQ9NP31 389 aa13.12□□□□□ -0.31
TRAPPC6B-207ENST00000557764 ADAP2Q9NPF8 381 aa13.12□□□□□ -0.31
TRAPPC6B-207ENST00000557764 CLDN16Q9Y5I7 305 aa13.12□□□□□ -0.31
TRAPPC6B-207ENST00000557764 WIF1Q9Y5W5 379 aa13.12□□□□□ -0.31
TRAPPC6B-207ENST00000557764 CLCA3PQ9Y6N3 262 aa13.12□□□□□ -0.31
TRAPPC6B-207ENST00000557764 A8MXE2 369 aa13.11□□□□□ -0.31
TRAPPC6B-207ENST00000557764 PJA2O43164 708 aa13.11□□□□□ -0.31
TRAPPC6B-207ENST00000557764 ZBTB14O43829 449 aa13.11□□□□□ -0.31
TRAPPC6B-207ENST00000557764 TRAPPC6AO75865 159 aa13.11□□□□□ -0.31
TRAPPC6B-207ENST00000557764 SERPINC1P01008 464 aa13.11□□□□□ -0.31
TRAPPC6B-207ENST00000557764 LOXP28300 417 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC6B-207ENST00000557764 GRIA1P42261 906 aa13.11□□□□□ -0.31
TRAPPC6B-207ENST00000557764 RNF4P78317 190 aa13.11□□□□□ -0.31
TRAPPC6B-207ENST00000557764 RGS1Q08116 209 aa13.11□□□□□ -0.31
TRAPPC6B-207ENST00000557764 FAM27E3Q08E93 113 aa13.11□□□□□ -0.31
TRAPPC6B-207ENST00000557764 SLC13A2Q13183 592 aa13.11□□□□□ -0.31
TRAPPC6B-207ENST00000557764 VASNQ6EMK4 673 aa13.11□□□□□ -0.31
TRAPPC6B-207ENST00000557764 PPP1R21Q6ZMI0 780 aa13.11□□□□□ -0.31
TRAPPC6B-207ENST00000557764 SPNS2Q8IVW8 549 aa13.11□□□□□ -0.31
TRAPPC6B-207ENST00000557764 MPP5Q8N3R9 675 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms