RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 HSPB2Q16082 182 aa16.97■□□□□ 0.31
ABCD4-228ENST00000557588 UGT3A1Q6NUS8 523 aa16.97■□□□□ 0.31
ABCD4-228ENST00000557588 CLEC9AQ6UXN8 241 aa16.97■□□□□ 0.31
ABCD4-228ENST00000557588 CALML6Q8TD86 181 aa16.97■□□□□ 0.31
ABCD4-228ENST00000557588 RNASE6Q93091 150 aaKnown RBP16.97■□□□□ 0.31
ABCD4-228ENST00000557588 HIST1H2AHQ96KK5 128 aa16.97■□□□□ 0.31
ABCD4-228ENST00000557588 SGCZQ96LD1 299 aa16.97■□□□□ 0.31
ABCD4-228ENST00000557588 HIST1H2AJQ99878 128 aa16.97■□□□□ 0.31
ABCD4-228ENST00000557588 H2AFJQ9BTM1 129 aa16.97■□□□□ 0.31
ABCD4-228ENST00000557588 CNPPD1Q9BV87 410 aa16.97■□□□□ 0.31
ABCD4-228ENST00000557588 AICDAQ9GZX7 198 aa16.97■□□□□ 0.31
ABCD4-228ENST00000557588 LIN28AQ9H9Z2 209 aaKnown RBP16.97■□□□□ 0.31
ABCD4-228ENST00000557588 PRTFDC1Q9NRG1 225 aa16.97■□□□□ 0.31
ABCD4-228ENST00000557588 ARL15Q9NXU5 204 aa16.97■□□□□ 0.31
ABCD4-228ENST00000557588 SPRR3Q9UBC9 169 aa16.97■□□□□ 0.31
ABCD4-228ENST00000557588 FBXO5Q9UKT4 447 aa16.97■□□□□ 0.31
ABCD4-228ENST00000557588 ZKSCAN5Q9Y2L8 839 aa16.97■□□□□ 0.31
ABCD4-228ENST00000557588 ATP6AP2A0A1C7CYW4 349 aa16.96■□□□□ 0.31
ABCD4-228ENST00000557588 MAGEB16A2A368 324 aa16.96■□□□□ 0.31
ABCD4-228ENST00000557588 WWP2O00308 870 aa16.96■□□□□ 0.31
ABCD4-228ENST00000557588 ATP6AP2O75787 350 aa16.96■□□□□ 0.31
ABCD4-228ENST00000557588 HAUS5O94927 633 aa16.96■□□□□ 0.31
ABCD4-228ENST00000557588 SERPINA6P08185 405 aa16.96■□□□□ 0.31
ABCD4-228ENST00000557588 HNRNPFP52597 415 aaKnown RBP16.96■□□□□ 0.31
ABCD4-228ENST00000557588 HK2P52789 917 aa16.96■□□□□ 0.31
ABCD4-228ENST00000557588 KEAP1Q14145 624 aa16.96■□□□□ 0.31
ABCD4-228ENST00000557588 CSHL1Q14406 222 aa16.96■□□□□ 0.31
ABCD4-228ENST00000557588 ZNF750Q32MQ0 723 aa16.96■□□□□ 0.31
ABCD4-228ENST00000557588 TMEM198Q66K66 360 aa16.96■□□□□ 0.31
ABCD4-228ENST00000557588 HSDL2Q6YN16 418 aa16.96■□□□□ 0.31
ABCD4-228ENST00000557588 FAM47EQ6ZV65 393 aa16.96■□□□□ 0.31
ABCD4-228ENST00000557588 SEM1Q6ZVN7 128 aa16.96■□□□□ 0.31
ABCD4-228ENST00000557588 FBXW8Q8N3Y1 598 aa16.96■□□□□ 0.31
ABCD4-228ENST00000557588 FBXL8Q96CD0 374 aa16.96■□□□□ 0.31
ABCD4-228ENST00000557588 LINGO1Q96FE5 620 aa16.96■□□□□ 0.31
ABCD4-228ENST00000557588 LRRC46Q96FV0 321 aa16.96■□□□□ 0.31
ABCD4-228ENST00000557588 NDNQ99608 321 aa16.96■□□□□ 0.31
ABCD4-228ENST00000557588 PELI2Q9HAT8 420 aa16.96■□□□□ 0.31
ABCD4-228ENST00000557588 SACM1LQ9NTJ5 587 aa16.96■□□□□ 0.31
ABCD4-228ENST00000557588 FOXD3Q9UJU5 478 aaPredicted RBP16.96■□□□□ 0.31
ABCD4-228ENST00000557588 CSPG4Q6UVK1 2322 aa16.96■□□□□ 0.3
ABCD4-228ENST00000557588 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.95■□□□□ 0.3
ABCD4-228ENST00000557588 TRGV5A0A0B4J1U4 118 aa16.95■□□□□ 0.3
ABCD4-228ENST00000557588 CLDN4O14493 209 aa16.95■□□□□ 0.3
ABCD4-228ENST00000557588 DVL2O14641 736 aa16.95■□□□□ 0.3
ABCD4-228ENST00000557588 MLNP12872 115 aa16.95■□□□□ 0.3
ABCD4-228ENST00000557588 TACR1P25103 407 aa16.95■□□□□ 0.3
ABCD4-228ENST00000557588 DNASE1L1P49184 302 aa16.95■□□□□ 0.3
ABCD4-228ENST00000557588 SLC13A2Q13183 592 aa16.95■□□□□ 0.3
ABCD4-228ENST00000557588 SLC10A1Q14973 349 aa16.95■□□□□ 0.3
ABCD4-228ENST00000557588 TOR1AIP1Q5JTV8 583 aa16.95■□□□□ 0.3
ABCD4-228ENST00000557588 ANKRD22Q5VYY1 191 aa16.95■□□□□ 0.3
ABCD4-228ENST00000557588 PAQR3Q6TCH7 311 aa16.95■□□□□ 0.3
ABCD4-228ENST00000557588 PRIMA1Q86XR5 153 aa16.95■□□□□ 0.3
ABCD4-228ENST00000557588 TMEM132CQ8N3T6 1108 aa16.95■□□□□ 0.3
ABCD4-228ENST00000557588 NAXEQ8NCW5 288 aa16.95■□□□□ 0.3
ABCD4-228ENST00000557588 TMEM52Q8NDY8 209 aa16.95■□□□□ 0.3
ABCD4-228ENST00000557588 ATL1Q8WXF7 558 aa16.95■□□□□ 0.3
ABCD4-228ENST00000557588 GAL3ST3Q96A11 431 aa16.95■□□□□ 0.3
ABCD4-228ENST00000557588 TSNARE1Q96NA8 513 aa16.95■□□□□ 0.3
ABCD4-228ENST00000557588 MDFIQ99750 246 aa16.95■□□□□ 0.3
ABCD4-228ENST00000557588 AIF1LQ9BQI0 150 aa16.95■□□□□ 0.3
ABCD4-228ENST00000557588 DESI2Q9BSY9 194 aa16.95■□□□□ 0.3
ABCD4-228ENST00000557588 FAM167BQ9BTA0 163 aa16.95■□□□□ 0.3
ABCD4-228ENST00000557588 NPLQ9BXD5 320 aaPredicted RBP16.95■□□□□ 0.3
ABCD4-228ENST00000557588 LDAHQ9H6V9 325 aa16.95■□□□□ 0.3
ABCD4-228ENST00000557588 ZNF703Q9H7S9 590 aaPredicted RBP16.95■□□□□ 0.3
ABCD4-228ENST00000557588 PLEKHF2Q9H8W4 249 aa16.95■□□□□ 0.3
ABCD4-228ENST00000557588 C20orf96Q9NUD7 363 aaPredicted RBP16.95■□□□□ 0.3
ABCD4-228ENST00000557588 TUBA8Q9NY65 449 aaPredicted RBP16.95■□□□□ 0.3
ABCD4-228ENST00000557588 TAS2R13Q9NYV9 303 aa16.95■□□□□ 0.3
ABCD4-228ENST00000557588 ATG4BQ9Y4P1 393 aa16.95■□□□□ 0.3
ABCD4-228ENST00000557588 PABPN1LA6NDY0 278 aaKnown RBP16.94■□□□□ 0.3
ABCD4-228ENST00000557588 SDR42E2A6NKP2 422 aa16.94■□□□□ 0.3
ABCD4-228ENST00000557588 FAM171A2A8MVW0 826 aa16.94■□□□□ 0.3
ABCD4-228ENST00000557588 GOSR1O95249 250 aa16.94■□□□□ 0.3
ABCD4-228ENST00000557588 CCL3P10147 92 aa16.94■□□□□ 0.3
ABCD4-228ENST00000557588 KCNJ1P48048 391 aa16.94■□□□□ 0.3
ABCD4-228ENST00000557588 RAB38P57729 211 aa16.94■□□□□ 0.3
ABCD4-228ENST00000557588 CCZ1BP86790 482 aa16.94■□□□□ 0.3
ABCD4-228ENST00000557588 CCZ1P86791 482 aaPredicted RBP16.94■□□□□ 0.3
ABCD4-228ENST00000557588 RUNX2Q13950 521 aa16.94■□□□□ 0.3
ABCD4-228ENST00000557588 KCTD19Q17RG1 926 aaPredicted RBP16.94■□□□□ 0.3
ABCD4-228ENST00000557588 TMPRSS11BQ86T26 416 aa16.94■□□□□ 0.3
ABCD4-228ENST00000557588 ZNF595Q8IYB9 648 aa16.94■□□□□ 0.3
ABCD4-228ENST00000557588 ULK2Q8IYT8 1036 aa16.94■□□□□ 0.3
ABCD4-228ENST00000557588 RNF10Q8N5U6 811 aaKnown RBP16.94■□□□□ 0.3
ABCD4-228ENST00000557588 GPATCH11Q8N954 259 aa16.94■□□□□ 0.3
ABCD4-228ENST00000557588 OR8K3Q8NH51 312 aa16.94■□□□□ 0.3
ABCD4-228ENST00000557588 XAB2Q9HCS7 855 aaKnown RBP16.94■□□□□ 0.3
ABCD4-228ENST00000557588 SEMA4BQ9NPR2 832 aaPredicted RBP16.94■□□□□ 0.3
ABCD4-228ENST00000557588 MTRF1LQ9UGC7 380 aaKnown RBP16.94■□□□□ 0.3
ABCD4-228ENST00000557588 CLCA3PQ9Y6N3 262 aa16.94■□□□□ 0.3
ABCD4-228ENST00000557588 ZNF354AO60765 605 aaPredicted RBP16.93■□□□□ 0.3
ABCD4-228ENST00000557588 P04436 131 aa16.93■□□□□ 0.3
ABCD4-228ENST00000557588 PTMSP20962 102 aa16.93■□□□□ 0.3
ABCD4-228ENST00000557588 BMP5P22003 454 aa16.93■□□□□ 0.3
ABCD4-228ENST00000557588 TERF1P54274 439 aa16.93■□□□□ 0.3
ABCD4-228ENST00000557588 STXBP1P61764 594 aaKnown RBP16.93■□□□□ 0.3
ABCD4-228ENST00000557588 DCAF7P61962 342 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms