RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 UGT1A1P22309 533 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 ADORA2BP29275 332 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 AKT2P31751 481 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 NNMTP40261 264 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 HARS2P49590 506 aaKnown RBP3.57□□□□□ -1.84
CHD8-212ENST00000557329 PGFP49763 221 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 CCR9P51686 369 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 FUT6P51993 359 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 HNRNPKP61978 463 aaKnown RBP eCLIP3.57□□□□□ -1.84
CHD8-212ENST00000557329 CCL7P80098 99 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 PLIN5Q00G26 463 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 FLNCQ14315 2725 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 PNLIPRP3Q17RR3 467 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 LRRK2Q5S007 2527 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 TMEM154Q6P9G4 183 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 Q6ZSR6 202 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 C1orf186Q6ZWK4 172 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 ZNF771Q7L3S4 317 aaPredicted RBP3.57□□□□□ -1.84
CHD8-212ENST00000557329 HAPLN4Q86UW8 402 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 DAW1Q8N136 415 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 STK40Q8N2I9 435 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 CARNMT1Q8N4J0 409 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 TMEM116Q8NCL8 245 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 APOBEC4Q8WW27 367 aaKnown RBP3.57□□□□□ -1.84
CHD8-212ENST00000557329 KIAA1143Q96AT1 154 aaPredicted RBP3.57□□□□□ -1.84
CHD8-212ENST00000557329 TMA16Q96EY4 203 aaKnown RBP3.57□□□□□ -1.84
CHD8-212ENST00000557329 CATSPER2Q96P56 530 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 CMKLR1Q99788 373 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 MRPL45Q9BRJ2 306 aaKnown RBP3.57□□□□□ -1.84
CHD8-212ENST00000557329 C1QTNF5Q9BXJ0 243 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 MTMR12Q9C0I1 747 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 TMEM245Q9H330 911 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 GPN2Q9H9Y4 310 aaPredicted RBP3.57□□□□□ -1.84
CHD8-212ENST00000557329 RBAKQ9NYW8 714 aaPredicted RBP3.57□□□□□ -1.84
CHD8-212ENST00000557329 COPG2Q9UBF2 871 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 MED13Q9UHV7 2174 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 GGA2Q9UJY4 613 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 SCML1Q9UN30 329 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 ZNF510Q9Y2H8 683 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 CAPN7Q9Y6W3 813 aa3.57□□□□□ -1.84
CHD8-212ENST00000557329 ITIH6Q6UXX5 1313 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 TCP11X1B4DZS4 312 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 TMX2-CTNND1H3BSU7 103 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 K7EM74 188 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 MAP2K7O14733 419 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 NVLO15381 856 aaKnown RBP3.56□□□□□ -1.84
CHD8-212ENST00000557329 AQP9O43315 295 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 TBL1XO60907 577 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 TBCAO75347 108 aaKnown RBP3.56□□□□□ -1.84
CHD8-212ENST00000557329 SCGB1D1O95968 90 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 EIF2S1P05198 315 aaKnown RBP3.56□□□□□ -1.84
CHD8-212ENST00000557329 CTSEP14091 401 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 TNNI1P19237 187 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 TRIM21P19474 475 aaKnown RBP3.56□□□□□ -1.84
CHD8-212ENST00000557329 TCN2P20062 427 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 HLA-FP30511 346 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 CD70P32970 193 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 AHRP35869 848 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 ARL3P36405 182 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 ETV5P41161 510 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 PIK3CAP42336 1068 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 CTSCP53634 463 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 NUCB2P80303 420 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 COG7P83436 770 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 OVGP1Q12889 678 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 TMEM115Q12893 351 aaPredicted RBP3.56□□□□□ -1.84
CHD8-212ENST00000557329 EIF3IQ13347 325 aaKnown RBP3.56□□□□□ -1.84
CHD8-212ENST00000557329 FRG1Q14331 258 aaKnown RBP3.56□□□□□ -1.84
CHD8-212ENST00000557329 ALG11Q2TAA5 492 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 PCGF3Q3KNV8 242 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 KRTAP21-3Q3LHN1 58 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 MPPE1Q53F39 396 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 CXorf66Q5JRM2 361 aaPredicted RBP3.56□□□□□ -1.84
CHD8-212ENST00000557329 ATP1A1-AS1Q5TC04 95 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 C18orf63Q68DL7 685 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 SCARA5Q6ZMJ2 495 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 TIPARPQ7Z3E1 657 aaKnown RBP3.56□□□□□ -1.84
CHD8-212ENST00000557329 CPLX4Q7Z7G2 160 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 ACOT1Q86TX2 421 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 IQCHQ86VS3 1027 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 SLC34A3Q8N130 599 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 BEST3Q8N1M1 668 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 PAF1Q8N7H5 531 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 SLC20A1Q8WUM9 679 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 PIWIL1Q96J94 861 aaKnown RBP3.56□□□□□ -1.84
CHD8-212ENST00000557329 CEP295NLQ96MC4 621 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 NUDCD1Q96RS6 583 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 PKMYT1Q99640 499 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 PIP5K1AQ99755 562 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 CCSER1Q9C0I3 900 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 RSPH9Q9H1X1 276 aaPredicted RBP3.56□□□□□ -1.84
CHD8-212ENST00000557329 FBXO44Q9H4M3 255 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 RANGRFQ9HD47 186 aaPredicted RBP3.56□□□□□ -1.84
CHD8-212ENST00000557329 DMAP1Q9NPF5 467 aaPredicted RBP3.56□□□□□ -1.84
CHD8-212ENST00000557329 DYRK4Q9NR20 520 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 FAM49BQ9NUQ9 324 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 TBC1D7Q9P0N9 293 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 CYTH4Q9UIA0 394 aa3.56□□□□□ -1.84
CHD8-212ENST00000557329 ERRFI1Q9UJM3 462 aaPredicted RBP3.56□□□□□ -1.84
CHD8-212ENST00000557329 ITGA11Q9UKX5 1188 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms