RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 MRM1Q6IN84 353 aaKnown RBP16.45■□□□□ 0.22
TUBB3-211ENST00000556536 NIPAL1Q6NVV3 410 aa16.45■□□□□ 0.22
TUBB3-211ENST00000556536 FAM198BQ6UWH4 519 aa16.45■□□□□ 0.22
TUBB3-211ENST00000556536 FNDC5Q8NAU1 212 aa16.45■□□□□ 0.22
TUBB3-211ENST00000556536 ZNF578Q96N58 590 aaPredicted RBP16.45■□□□□ 0.22
TUBB3-211ENST00000556536 DPH2Q9BQC3 489 aaPredicted RBP16.45■□□□□ 0.22
TUBB3-211ENST00000556536 C1orf50Q9BV19 199 aa16.45■□□□□ 0.22
TUBB3-211ENST00000556536 YIPF2Q9BWQ6 316 aa16.45■□□□□ 0.22
TUBB3-211ENST00000556536 NPLQ9BXD5 320 aaPredicted RBP16.45■□□□□ 0.22
TUBB3-211ENST00000556536 TRIM55Q9BYV6 548 aa16.45■□□□□ 0.22
TUBB3-211ENST00000556536 KCMF1Q9P0J7 381 aa16.45■□□□□ 0.22
TUBB3-211ENST00000556536 IFT80Q9P2H3 777 aaPredicted RBP16.45■□□□□ 0.22
TUBB3-211ENST00000556536 TRPC4Q9UBN4 977 aa16.45■□□□□ 0.22
TUBB3-211ENST00000556536 CTSFQ9UBX1 484 aa16.45■□□□□ 0.22
TUBB3-211ENST00000556536 MCM8Q9UJA3 840 aa16.45■□□□□ 0.22
TUBB3-211ENST00000556536 FBXW2Q9UKT8 454 aa16.45■□□□□ 0.22
TUBB3-211ENST00000556536 ACSL6Q9UKU0 697 aa16.45■□□□□ 0.22
TUBB3-211ENST00000556536 PADI1Q9ULC6 663 aa16.45■□□□□ 0.22
TUBB3-211ENST00000556536 ASB4Q9Y574 426 aa16.45■□□□□ 0.22
TUBB3-211ENST00000556536 FAM227AF5H4B4 570 aa16.44■□□□□ 0.22
TUBB3-211ENST00000556536 CNOT3O75175 753 aaKnown RBP16.44■□□□□ 0.22
TUBB3-211ENST00000556536 ANXA4P09525 319 aaPredicted RBP16.44■□□□□ 0.22
TUBB3-211ENST00000556536 FAM58BPP0C7Q3 252 aa16.44■□□□□ 0.22
TUBB3-211ENST00000556536 CCNYL3P0C7X3 344 aa16.44■□□□□ 0.22
TUBB3-211ENST00000556536 TROVE2P10155 538 aaKnown RBP eCLIP16.44■□□□□ 0.22
TUBB3-211ENST00000556536 LBPP18428 481 aa16.44■□□□□ 0.22
TUBB3-211ENST00000556536 TACR1P25103 407 aa16.44■□□□□ 0.22
TUBB3-211ENST00000556536 CD82P27701 267 aa16.44■□□□□ 0.22
TUBB3-211ENST00000556536 HNRNPH2P55795 449 aaKnown RBP16.44■□□□□ 0.22
TUBB3-211ENST00000556536 FOXL2P58012 376 aa16.44■□□□□ 0.22
TUBB3-211ENST00000556536 MAP7Q14244 749 aa16.44■□□□□ 0.22
TUBB3-211ENST00000556536 TBC1D25Q3MII6 688 aa16.44■□□□□ 0.22
TUBB3-211ENST00000556536 NXNQ6DKJ4 435 aa16.44■□□□□ 0.22
TUBB3-211ENST00000556536 CYP20A1Q6UW02 462 aa16.44■□□□□ 0.22
TUBB3-211ENST00000556536 OVCH1Q7RTY7 1134 aa16.44■□□□□ 0.22
TUBB3-211ENST00000556536 DTX1Q86Y01 620 aa16.44■□□□□ 0.22
TUBB3-211ENST00000556536 TMEM151BQ8IW70 566 aa16.44■□□□□ 0.22
TUBB3-211ENST00000556536 NLGN4XQ8N0W4 816 aa16.44■□□□□ 0.22
TUBB3-211ENST00000556536 ESX1Q8N693 406 aa16.44■□□□□ 0.22
TUBB3-211ENST00000556536 NLGN4YQ8NFZ3 816 aaPredicted RBP16.44■□□□□ 0.22
TUBB3-211ENST00000556536 OR51Q1Q8NH59 317 aa16.44■□□□□ 0.22
TUBB3-211ENST00000556536 ACTRT2Q8TDY3 377 aa16.44■□□□□ 0.22
TUBB3-211ENST00000556536 PEX11GQ96HA9 241 aa16.44■□□□□ 0.22
TUBB3-211ENST00000556536 METTL2AQ96IZ6 378 aaKnown RBP16.44■□□□□ 0.22
TUBB3-211ENST00000556536 RBCK1Q9BYM8 510 aa16.44■□□□□ 0.22
TUBB3-211ENST00000556536 FAM107BQ9H098 131 aa16.44■□□□□ 0.22
TUBB3-211ENST00000556536 RABEP2Q9H5N1 569 aa16.44■□□□□ 0.22
TUBB3-211ENST00000556536 CLK4Q9HAZ1 481 aaKnown RBP16.44■□□□□ 0.22
TUBB3-211ENST00000556536 DAPP1Q9UN19 280 aa16.44■□□□□ 0.22
TUBB3-211ENST00000556536 MAP4K5Q9Y4K4 846 aa16.44■□□□□ 0.22
TUBB3-211ENST00000556536 ATG4BQ9Y4P1 393 aa16.44■□□□□ 0.22
TUBB3-211ENST00000556536 CELSR3Q9NYQ7 3312 aa16.43■□□□□ 0.22
TUBB3-211ENST00000556536 A0A0G2JND7 137 aa16.43■□□□□ 0.22
TUBB3-211ENST00000556536 GNG14A0A1W2PPG7 69 aa16.43■□□□□ 0.22
TUBB3-211ENST00000556536 ARHGAP10A1A4S6 786 aa16.43■□□□□ 0.22
TUBB3-211ENST00000556536 SHOX2O60902 331 aaPredicted RBP16.43■□□□□ 0.22
TUBB3-211ENST00000556536 JRKO75564 520 aa16.43■□□□□ 0.22
TUBB3-211ENST00000556536 MYO1DO94832 1006 aa16.43■□□□□ 0.22
TUBB3-211ENST00000556536 BCKDHAP12694 445 aa16.43■□□□□ 0.22
TUBB3-211ENST00000556536 SDC1P18827 310 aa16.43■□□□□ 0.22
TUBB3-211ENST00000556536 MAPK12P53778 367 aa16.43■□□□□ 0.22
TUBB3-211ENST00000556536 EMX2Q04743 252 aa16.43■□□□□ 0.22
TUBB3-211ENST00000556536 ERV3-1Q14264 604 aa16.43■□□□□ 0.22
TUBB3-211ENST00000556536 TGIF1Q15583 401 aa16.43■□□□□ 0.22
TUBB3-211ENST00000556536 LSM12Q3MHD2 195 aaKnown RBP16.43■□□□□ 0.22
TUBB3-211ENST00000556536 VWA2Q5GFL6 755 aa16.43■□□□□ 0.22
TUBB3-211ENST00000556536 IL23RQ5VWK5 629 aa16.43■□□□□ 0.22
TUBB3-211ENST00000556536 MLIPQ5VWP3 458 aa16.43■□□□□ 0.22
TUBB3-211ENST00000556536 GPR180Q86V85 440 aa16.43■□□□□ 0.22
TUBB3-211ENST00000556536 ZC3H7AQ8IWR0 971 aaKnown RBP16.43■□□□□ 0.22
TUBB3-211ENST00000556536 C16orf78Q8WTQ4 265 aa16.43■□□□□ 0.22
TUBB3-211ENST00000556536 CT55Q8WUE5 264 aa16.43■□□□□ 0.22
TUBB3-211ENST00000556536 NKD1Q969G9 470 aa16.43■□□□□ 0.22
TUBB3-211ENST00000556536 TM4SF18Q96CE8 201 aa16.43■□□□□ 0.22
TUBB3-211ENST00000556536 CSF3RQ99062 836 aa16.43■□□□□ 0.22
TUBB3-211ENST00000556536 LYRM4Q9HD34 91 aa16.43■□□□□ 0.22
TUBB3-211ENST00000556536 LYARQ9NX58 379 aaKnown RBP16.43■□□□□ 0.22
TUBB3-211ENST00000556536 TEX10Q9NXF1 929 aaPredicted RBP16.43■□□□□ 0.22
TUBB3-211ENST00000556536 TMED5Q9Y3A6 229 aa16.43■□□□□ 0.22
TUBB3-211ENST00000556536 A0A1W2PR48 441 aa16.42■□□□□ 0.22
TUBB3-211ENST00000556536 EIF4E1BA6NMX2 242 aaKnown RBP16.42■□□□□ 0.22
TUBB3-211ENST00000556536 PRKRAO75569 313 aaKnown RBP16.42■□□□□ 0.22
TUBB3-211ENST00000556536 ALDOCP09972 364 aaKnown RBP16.42■□□□□ 0.22
TUBB3-211ENST00000556536 PIM1P11309 404 aaPredicted RBP16.42■□□□□ 0.22
TUBB3-211ENST00000556536 RNH1P13489 461 aaKnown RBP16.42■□□□□ 0.22
TUBB3-211ENST00000556536 STAT5AP42229 794 aa16.42■□□□□ 0.22
TUBB3-211ENST00000556536 XCR1P46094 333 aa16.42■□□□□ 0.22
TUBB3-211ENST00000556536 HNRNPFP52597 415 aaKnown RBP16.42■□□□□ 0.22
TUBB3-211ENST00000556536 DIO3P55073 304 aa16.42■□□□□ 0.22
TUBB3-211ENST00000556536 RAB38P57729 211 aa16.42■□□□□ 0.22
TUBB3-211ENST00000556536 TAS2R50P59544 299 aa16.42■□□□□ 0.22
TUBB3-211ENST00000556536 ERVK-8P63133 956 aa16.42■□□□□ 0.22
TUBB3-211ENST00000556536 SMU1Q2TAY7 513 aa16.42■□□□□ 0.22
TUBB3-211ENST00000556536 FAM69BQ5VUD6 431 aa16.42■□□□□ 0.22
TUBB3-211ENST00000556536 TMEM198Q66K66 360 aa16.42■□□□□ 0.22
TUBB3-211ENST00000556536 C18orf63Q68DL7 685 aa16.42■□□□□ 0.22
TUBB3-211ENST00000556536 OGFOD2Q6N063 350 aa16.42■□□□□ 0.22
TUBB3-211ENST00000556536 MRPL14Q6P1L8 145 aaKnown RBP16.42■□□□□ 0.22
TUBB3-211ENST00000556536 ACAD11Q709F0 780 aa16.42■□□□□ 0.22
TUBB3-211ENST00000556536 CACNA2D3Q8IZS8 1091 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms