RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 LIPHQ8WWY8 451 aa3.6□□□□□ -1.83
SCFD1-221ENST00000556534 SEPT8Q92599 483 aa3.6□□□□□ -1.83
SCFD1-221ENST00000556534 TOMM40LQ969M1 308 aa3.6□□□□□ -1.83
SCFD1-221ENST00000556534 SNRNP40Q96DI7 357 aaKnown RBP3.6□□□□□ -1.83
SCFD1-221ENST00000556534 C17orf62Q9BQA9 187 aa3.6□□□□□ -1.83
SCFD1-221ENST00000556534 MTIF3Q9H2K0 278 aaKnown RBP3.6□□□□□ -1.83
SCFD1-221ENST00000556534 KCNK13Q9HB14 408 aa3.6□□□□□ -1.83
SCFD1-221ENST00000556534 ARMCX3Q9UH62 379 aaPredicted RBP3.6□□□□□ -1.83
SCFD1-221ENST00000556534 GTF3C4Q9UKN8 822 aa3.6□□□□□ -1.83
SCFD1-221ENST00000556534 TRGV8A0A0C4DH27 118 aa3.59□□□□□ -1.83
SCFD1-221ENST00000556534 IGHV3-16A0A0C4DH30 117 aa3.59□□□□□ -1.83
SCFD1-221ENST00000556534 TRBV5-4A0A0C4DH59 114 aa3.59□□□□□ -1.83
SCFD1-221ENST00000556534 GTPBP10A4D1E9 387 aaKnown RBP3.59□□□□□ -1.83
SCFD1-221ENST00000556534 H0Y626 953 aa3.59□□□□□ -1.83
SCFD1-221ENST00000556534 PDHXO00330 501 aa3.59□□□□□ -1.83
SCFD1-221ENST00000556534 B4GAT1O43505 415 aa3.59□□□□□ -1.83
SCFD1-221ENST00000556534 GALR3O60755 368 aaPredicted RBP3.59□□□□□ -1.83
SCFD1-221ENST00000556534 LETM1O95202 739 aaPredicted RBP3.59□□□□□ -1.83
SCFD1-221ENST00000556534 ACKR3P25106 362 aa3.59□□□□□ -1.83
SCFD1-221ENST00000556534 KRT2P35908 639 aa3.59□□□□□ -1.83
SCFD1-221ENST00000556534 TYSND1Q2T9J0 566 aa3.59□□□□□ -1.83
SCFD1-221ENST00000556534 POM121L1PQ3SYA9 428 aa3.59□□□□□ -1.83
SCFD1-221ENST00000556534 RFTN2Q52LD8 501 aaPredicted RBP3.59□□□□□ -1.83
SCFD1-221ENST00000556534 NEPROQ6NW34 567 aa3.59□□□□□ -1.83
SCFD1-221ENST00000556534 HOOK3Q86VS8 718 aa3.59□□□□□ -1.83
SCFD1-221ENST00000556534 NLRP14Q86W24 1093 aa3.59□□□□□ -1.83
SCFD1-221ENST00000556534 SLC39A11Q8N1S5 342 aa3.59□□□□□ -1.83
SCFD1-221ENST00000556534 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.59□□□□□ -1.83
SCFD1-221ENST00000556534 OR7G3Q8NG95 312 aa3.59□□□□□ -1.83
SCFD1-221ENST00000556534 OR6F1Q8NGZ6 308 aa3.59□□□□□ -1.83
SCFD1-221ENST00000556534 STRADBQ9C0K7 418 aa3.59□□□□□ -1.83
SCFD1-221ENST00000556534 WDR41Q9HAD4 459 aa3.59□□□□□ -1.83
SCFD1-221ENST00000556534 SLC7A10Q9NS82 523 aa3.59□□□□□ -1.83
SCFD1-221ENST00000556534 SEPT10Q9P0V9 454 aa3.59□□□□□ -1.83
SCFD1-221ENST00000556534 RPGRIP1LQ68CZ1 1315 aa3.59□□□□□ -1.83
SCFD1-221ENST00000556534 AGRNO00468 2067 aa3.58□□□□□ -1.84
SCFD1-221ENST00000556534 A0A087X0K7 114 aa3.58□□□□□ -1.84
SCFD1-221ENST00000556534 A4D1N5 150 aa3.58□□□□□ -1.84
SCFD1-221ENST00000556534 SDR42E2A6NKP2 422 aa3.58□□□□□ -1.84
SCFD1-221ENST00000556534 OGTO15294 1046 aa3.58□□□□□ -1.84
SCFD1-221ENST00000556534 OR6B1O95007 311 aa3.58□□□□□ -1.84
SCFD1-221ENST00000556534 IGHG1P01857 330 aa3.58□□□□□ -1.84
SCFD1-221ENST00000556534 GJB2P29033 226 aa3.58□□□□□ -1.84
SCFD1-221ENST00000556534 SLC3A1Q07837 685 aa3.58□□□□□ -1.84
SCFD1-221ENST00000556534 ARHGAP1Q07960 439 aa3.58□□□□□ -1.84
SCFD1-221ENST00000556534 ANKRD20A4Q4UJ75 823 aa3.58□□□□□ -1.84
SCFD1-221ENST00000556534 ANKRD20A8PQ5CZ79 823 aa3.58□□□□□ -1.84
SCFD1-221ENST00000556534 ANKRD20A2Q5SQ80 823 aa3.58□□□□□ -1.84
SCFD1-221ENST00000556534 C9orf66Q5T8R8 295 aa3.58□□□□□ -1.84
SCFD1-221ENST00000556534 ANKRD20A1Q5TYW2 823 aa3.58□□□□□ -1.84
SCFD1-221ENST00000556534 ANKRD20A3Q5VUR7 823 aa3.58□□□□□ -1.84
SCFD1-221ENST00000556534 AGAP6Q5VW22 663 aa3.58□□□□□ -1.84
SCFD1-221ENST00000556534 KRTAP5-4Q6L8H1 288 aa3.58□□□□□ -1.84
SCFD1-221ENST00000556534 RFPL4BQ6ZWI9 263 aa3.58□□□□□ -1.84
SCFD1-221ENST00000556534 RPAINQ86UA6 219 aa3.58□□□□□ -1.84
SCFD1-221ENST00000556534 HPS6Q86YV9 775 aa3.58□□□□□ -1.84
SCFD1-221ENST00000556534 KLHDC8AQ8IYD2 350 aa3.58□□□□□ -1.84
SCFD1-221ENST00000556534 ELMOD1Q8N336 334 aa3.58□□□□□ -1.84
SCFD1-221ENST00000556534 LINC00612Q8N6U2 182 aa3.58□□□□□ -1.84
SCFD1-221ENST00000556534 C4orf32Q8N8J7 132 aa3.58□□□□□ -1.84
SCFD1-221ENST00000556534 CSNK1G2-AS1Q8NCQ2 148 aa3.58□□□□□ -1.84
SCFD1-221ENST00000556534 C8orf46Q8TAG6 207 aa3.58□□□□□ -1.84
SCFD1-221ENST00000556534 GPR148Q8TDV2 347 aa3.58□□□□□ -1.84
SCFD1-221ENST00000556534 TEKT1Q969V4 418 aa3.58□□□□□ -1.84
SCFD1-221ENST00000556534 PSMB7Q99436 277 aa3.58□□□□□ -1.84
SCFD1-221ENST00000556534 HNRNPABQ99729 332 aaKnown RBP3.58□□□□□ -1.84
SCFD1-221ENST00000556534 ZNF559Q9BR84 538 aa3.58□□□□□ -1.84
SCFD1-221ENST00000556534 TMEM206Q9H813 350 aa3.58□□□□□ -1.84
SCFD1-221ENST00000556534 PLEKHA3Q9HB20 300 aa3.58□□□□□ -1.84
SCFD1-221ENST00000556534 S100A14Q9HCY8 104 aa3.58□□□□□ -1.84
SCFD1-221ENST00000556534 DEPPQ9NTK1 212 aa3.58□□□□□ -1.84
SCFD1-221ENST00000556534 DNAJC17Q9NVM6 304 aaKnown RBP3.58□□□□□ -1.84
SCFD1-221ENST00000556534 ARGLU1Q9NWB6 273 aaPredicted RBP3.58□□□□□ -1.84
SCFD1-221ENST00000556534 MIS18AQ9NYP9 233 aa3.58□□□□□ -1.84
SCFD1-221ENST00000556534 VPS18Q9P253 973 aa3.58□□□□□ -1.84
SCFD1-221ENST00000556534 RARRES3Q9UL19 164 aa3.58□□□□□ -1.84
SCFD1-221ENST00000556534 SH3GLB1Q9Y371 365 aa3.58□□□□□ -1.84
SCFD1-221ENST00000556534 ETV7Q9Y603 341 aa3.58□□□□□ -1.84
SCFD1-221ENST00000556534 PHF1O43189 567 aaPredicted RBP3.57□□□□□ -1.84
SCFD1-221ENST00000556534 GLCEO94923 617 aa3.57□□□□□ -1.84
SCFD1-221ENST00000556534 RENP00797 406 aa3.57□□□□□ -1.84
SCFD1-221ENST00000556534 GH1P01241 217 aa3.57□□□□□ -1.84
SCFD1-221ENST00000556534 C8orf89P0DMQ9 161 aa3.57□□□□□ -1.84
SCFD1-221ENST00000556534 MAGEB1P43366 347 aa3.57□□□□□ -1.84
SCFD1-221ENST00000556534 ACY1Q03154 408 aa3.57□□□□□ -1.84
SCFD1-221ENST00000556534 ITPK1Q13572 414 aa3.57□□□□□ -1.84
SCFD1-221ENST00000556534 ECSCRQ19T08 205 aa3.57□□□□□ -1.84
SCFD1-221ENST00000556534 GON4LQ3T8J9 2241 aa3.57□□□□□ -1.84
SCFD1-221ENST00000556534 MUC21Q5SSG8 566 aa3.57□□□□□ -1.84
SCFD1-221ENST00000556534 TMEM64Q6YI46 380 aa3.57□□□□□ -1.84
SCFD1-221ENST00000556534 GBP6Q6ZN66 633 aa3.57□□□□□ -1.84
SCFD1-221ENST00000556534 CACUL1Q86Y37 369 aa3.57□□□□□ -1.84
SCFD1-221ENST00000556534 FGFRL1Q8N441 504 aa3.57□□□□□ -1.84
SCFD1-221ENST00000556534 OR4Q3Q8NH05 313 aa3.57□□□□□ -1.84
SCFD1-221ENST00000556534 UBLCP1Q8WVY7 318 aaPredicted RBP3.57□□□□□ -1.84
SCFD1-221ENST00000556534 ALKBH3Q96Q83 286 aaPredicted RBP3.57□□□□□ -1.84
SCFD1-221ENST00000556534 TNFRSF13CQ96RJ3 184 aa3.57□□□□□ -1.84
SCFD1-221ENST00000556534 UTP14AQ9BVJ6 771 aaKnown RBP3.57□□□□□ -1.84
SCFD1-221ENST00000556534 TRIM7Q9C029 511 aa3.57□□□□□ -1.84
SCFD1-221ENST00000556534 C2orf40Q9H1Z8 148 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms