RNA–Protein interactions for RNA: ENST00000556523.1

SDR39U1-219, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-219ENST00000556523 ARL4CP56559 192 aa16.4■□□□□ 0.22
SDR39U1-219ENST00000556523 PPIAP62937 165 aaKnown RBP16.4■□□□□ 0.22
SDR39U1-219ENST00000556523 MGAT5Q09328 741 aa16.4■□□□□ 0.22
SDR39U1-219ENST00000556523 ZNF460Q14592 562 aa16.4■□□□□ 0.22
SDR39U1-219ENST00000556523 TSNQ15631 228 aaKnown RBP16.4■□□□□ 0.22
SDR39U1-219ENST00000556523 ELAVL1Q15717 326 aaKnown RBP16.4■□□□□ 0.22
SDR39U1-219ENST00000556523 IL20RBQ6UXL0 311 aa16.4■□□□□ 0.22
SDR39U1-219ENST00000556523 SLCO4C1Q6ZQN7 724 aa16.4■□□□□ 0.22
SDR39U1-219ENST00000556523 GK5Q6ZS86 529 aa16.4■□□□□ 0.22
SDR39U1-219ENST00000556523 ACAD11Q709F0 780 aa16.4■□□□□ 0.22
SDR39U1-219ENST00000556523 CLNKQ7Z7G1 428 aa16.4■□□□□ 0.22
SDR39U1-219ENST00000556523 ZC3HC1Q86WB0 502 aaKnown RBP16.4■□□□□ 0.22
SDR39U1-219ENST00000556523 KLHL7Q8IXQ5 586 aa16.4■□□□□ 0.22
SDR39U1-219ENST00000556523 DAZLQ92904 295 aaKnown RBP16.4■□□□□ 0.22
SDR39U1-219ENST00000556523 SEC16BQ96JE7 1060 aa16.4■□□□□ 0.22
SDR39U1-219ENST00000556523 CAPS2Q9BXY5 557 aa16.4■□□□□ 0.22
SDR39U1-219ENST00000556523 DEFB127Q9H1M4 99 aa16.4■□□□□ 0.22
SDR39U1-219ENST00000556523 KCNJ16Q9NPI9 418 aa16.4■□□□□ 0.22
SDR39U1-219ENST00000556523 WWOXQ9NZC7 414 aa16.4■□□□□ 0.22
SDR39U1-219ENST00000556523 TACC2O95359 2948 aa16.4■□□□□ 0.22
SDR39U1-219ENST00000556523 DNAJC13O75165 2243 aa16.39■□□□□ 0.22
SDR39U1-219ENST00000556523 CLEC3AO75596 197 aa16.39■□□□□ 0.21
SDR39U1-219ENST00000556523 HNRNPFP52597 415 aaKnown RBP16.39■□□□□ 0.21
SDR39U1-219ENST00000556523 SLC12A2P55011 1212 aa16.39■□□□□ 0.21
SDR39U1-219ENST00000556523 DR1Q01658 176 aa16.39■□□□□ 0.21
SDR39U1-219ENST00000556523 TGM3Q08188 693 aa16.39■□□□□ 0.21
SDR39U1-219ENST00000556523 TESK1Q15569 626 aa16.39■□□□□ 0.21
SDR39U1-219ENST00000556523 HSDL2Q6YN16 418 aa16.39■□□□□ 0.21
SDR39U1-219ENST00000556523 SPNS3Q6ZMD2 512 aa16.39■□□□□ 0.21
SDR39U1-219ENST00000556523 RGS9BPQ6ZS82 235 aa16.39■□□□□ 0.21
SDR39U1-219ENST00000556523 SLC22A16Q86VW1 577 aa16.39■□□□□ 0.21
SDR39U1-219ENST00000556523 TMEM200AQ86VY9 491 aa16.39■□□□□ 0.21
SDR39U1-219ENST00000556523 OR2L5Q8NG80 312 aa16.39■□□□□ 0.21
SDR39U1-219ENST00000556523 OR2M7Q8NG81 312 aa16.39■□□□□ 0.21
SDR39U1-219ENST00000556523 LILRB4Q8NHJ6 448 aa16.39■□□□□ 0.21
SDR39U1-219ENST00000556523 SERINC2Q96SA4 455 aa16.39■□□□□ 0.21
SDR39U1-219ENST00000556523 PITHD1Q9GZP4 211 aaPredicted RBP16.39■□□□□ 0.21
SDR39U1-219ENST00000556523 REXO4Q9GZR2 422 aaKnown RBP16.39■□□□□ 0.21
SDR39U1-219ENST00000556523 GPRC5BQ9NZH0 403 aa16.39■□□□□ 0.21
SDR39U1-219ENST00000556523 PSAT1Q9Y617 370 aa16.39■□□□□ 0.21
SDR39U1-219ENST00000556523 LRIT2A6NDA9 550 aa16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 NCF1BA6NI72 391 aaPredicted RBP16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 NCF1CA8MVU1 366 aaPredicted RBP16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 ESPNB1AK53 854 aa16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 NPIPA2E9PIF3 369 aa16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 NPIPA3F8WFD2 350 aa16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 TGFBR3LH3BV60 316 aa16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 CLGNO14967 610 aa16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 PRKNO60260 465 aaPredicted RBP16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 OR6B1O95007 311 aa16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 NCF1P14598 390 aaPredicted RBP16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 CERS1P27544 350 aa16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 SOX3P41225 446 aa16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 GDF5P43026 501 aa16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 SLC6A12P48065 614 aa16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 MTTPP55157 894 aa16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 TAS2R39P59534 338 aa16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 STX4Q12846 297 aa16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 FRG1Q14331 258 aaKnown RBP16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 C18orf21Q32NC0 220 aaPredicted RBP16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 C16orf47Q6ZP98 133 aaPredicted RBP16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 MAATS1Q7Z4T9 603 aa16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 ANKMY2Q8IV38 441 aa16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 TCAIMQ8N3R3 496 aa16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 TMEM52Q8NDY8 209 aa16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 MNS1Q8NEH6 495 aa16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 OR14A16Q8NHC5 309 aa16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 SREK1Q8WXA9 508 aaKnown RBP16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 RHBDF1Q96CC6 855 aa16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 PWWP2AQ96N64 755 aa16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 QRFPRQ96P65 431 aa16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 RASL10BQ96S79 203 aa16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 KRT12Q99456 494 aa16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 ZNF559Q9BR84 538 aa16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 WDR83Q9BRX9 315 aaKnown RBP16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 NT5DC2Q9H857 520 aa16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 CNOT10Q9H9A5 744 aaKnown RBP16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 LIN28AQ9H9Z2 209 aaKnown RBP16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 NPDC1Q9NQX5 325 aaPredicted RBP16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 DEPPQ9NTK1 212 aa16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 NSMCE4AQ9NXX6 385 aa16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 MYOTQ9UBF9 498 aa16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 HRH3Q9Y5N1 445 aa16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 TEX264Q9Y6I9 313 aa16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 PHF3Q92576 2039 aaKnown RBP16.38■□□□□ 0.21
SDR39U1-219ENST00000556523 HCFC1P51610 2035 aa16.37■□□□□ 0.21
SDR39U1-219ENST00000556523 FIGNL2A6NMB9 653 aa16.37■□□□□ 0.21
SDR39U1-219ENST00000556523 WWP2O00308 870 aa16.37■□□□□ 0.21
SDR39U1-219ENST00000556523 BCKDKO14874 412 aa16.37■□□□□ 0.21
SDR39U1-219ENST00000556523 CD1EP15812 388 aa16.37■□□□□ 0.21
SDR39U1-219ENST00000556523 IGFBP2P18065 325 aa16.37■□□□□ 0.21
SDR39U1-219ENST00000556523 MSX1P28360 303 aa16.37■□□□□ 0.21
SDR39U1-219ENST00000556523 GPR143P51810 404 aa16.37■□□□□ 0.21
SDR39U1-219ENST00000556523 LIM2P55344 173 aa16.37■□□□□ 0.21
SDR39U1-219ENST00000556523 NUP107P57740 925 aa16.37■□□□□ 0.21
SDR39U1-219ENST00000556523 PMPCAQ10713 525 aa16.37■□□□□ 0.21
SDR39U1-219ENST00000556523 EFTUD2Q15029 972 aaKnown RBP eCLIP16.37■□□□□ 0.211e-24■□□□□ 11
SDR39U1-219ENST00000556523 NDUFAF5Q5TEU4 345 aa16.37■□□□□ 0.21
SDR39U1-219ENST00000556523 RTL4Q6ZR62 310 aa16.37■□□□□ 0.21
SDR39U1-219ENST00000556523 CCDC71Q8IV32 467 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms