RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 GREB1Q4ZG55 1949 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 DOCK4Q8N1I0 1966 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 SHROOM3Q8TF72 1996 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.93□□□□□ -1.62
SRP54-211ENST00000556445 TYW5A2RUC4 315 aaKnown RBP4.93□□□□□ -1.62
SRP54-211ENST00000556445 XKRY2A2RUG3 117 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 EME2A4GXA9 379 aaPredicted RBP4.93□□□□□ -1.62
SRP54-211ENST00000556445 TRIM49D1C9J1S8 452 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 F8W810 466 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 H0YIV9 168 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 KCNK1O00180 336 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 SLC30A4O14863 429 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 PER2O15055 1255 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 MSI1O43347 362 aaKnown RBP4.93□□□□□ -1.62
SRP54-211ENST00000556445 TYROBPO43914 113 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 ACSL4O60488 711 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 CYTIPO60759 359 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 MITFO75030 526 aaPredicted RBP4.93□□□□□ -1.62
SRP54-211ENST00000556445 BANF1O75531 89 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 AKR7A3O95154 331 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 MOCS2O96007 188 aaPredicted RBP4.93□□□□□ -1.62
SRP54-211ENST00000556445 PLGP00747 810 aaPredicted RBP4.93□□□□□ -1.62
SRP54-211ENST00000556445 TIMP1P01033 207 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 TGFAP01135 160 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 PRKCGP05129 697 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 FESP07332 822 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 GSTA1P08263 222 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 FAM58BPP0C7Q3 252 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 TROVE2P10155 538 aaKnown RBP eCLIP4.93□□□□□ -1.62
SRP54-211ENST00000556445 NEFHP12036 1026 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 EPORP19235 508 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 OR1D2P34982 312 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 THBS4P35443 961 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 CDH4P55283 916 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 GAD2Q05329 585 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 IL10RBQ08334 325 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 SCN5AQ14524 2016 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 RFTN1Q14699 578 aaPredicted RBP4.93□□□□□ -1.62
SRP54-211ENST00000556445 SGCBQ16585 318 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 KCTD19Q17RG1 926 aaPredicted RBP4.93□□□□□ -1.62
SRP54-211ENST00000556445 FUT11Q495W5 492 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 IGSF11Q5DX21 431 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 MS4A13Q5J8X5 152 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 PCID2Q5JVF3 399 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 MARC1Q5VT66 337 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 KCTD11Q693B1 232 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 PDPK2PQ6A1A2 396 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 NHLRC1Q6VVB1 395 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 SLC36A4Q6YBV0 504 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 KYAT3Q6YP21 454 aaKnown RBP4.93□□□□□ -1.62
SRP54-211ENST00000556445 GLDNQ6ZMI3 551 aaPredicted RBP4.93□□□□□ -1.62
SRP54-211ENST00000556445 ZNF534Q76KX8 674 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 NLRP9Q7RTR0 991 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 WDR53Q7Z5U6 358 aaPredicted RBP4.93□□□□□ -1.62
SRP54-211ENST00000556445 PIGWQ7Z7B1 504 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 TMEM135Q86UB9 458 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 LRRC34Q8IZ02 419 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 SLC39A11Q8N1S5 342 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 KDM8Q8N371 416 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 DCLK2Q8N568 766 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 NPWQ8N729 165 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 OR7G3Q8NG95 312 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 ZNF398Q8TD17 642 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 BPIFB1Q8TDL5 484 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 PTPMT1Q8WUK0 201 aaPredicted RBP4.93□□□□□ -1.62
SRP54-211ENST00000556445 THRSPQ92748 146 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 TMEM186Q96B77 213 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 ZNF689Q96CS4 500 aaPredicted RBP4.93□□□□□ -1.62
SRP54-211ENST00000556445 ARSGQ96EG1 525 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 CERS2Q96G23 380 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 ZNF333Q96JL9 665 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 SAMD8Q96LT4 415 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 TSNARE1Q96NA8 513 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 PGLYRP2Q96PD5 576 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 PKP2Q99959 881 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 TBL1YQ9BQ87 522 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 WDR83Q9BRX9 315 aaKnown RBP4.93□□□□□ -1.62
SRP54-211ENST00000556445 FSD1LQ9BXM9 530 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 PITPNM3Q9BZ71 974 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 SLC39A8Q9C0K1 460 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 NACA2Q9H009 215 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 CLPBQ9H078 707 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 WNT5BQ9H1J7 359 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 SLC25A51Q9H1U9 297 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 HRH4Q9H3N8 390 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 RIBC2Q9H4K1 309 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 FAM96AQ9H5X1 160 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 EPHX3Q9H6B9 360 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 CWH43Q9H720 699 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 MRPL17Q9NRX2 175 aaKnown RBP4.93□□□□□ -1.62
SRP54-211ENST00000556445 CENPMQ9NSP4 180 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 TRPC4Q9UBN4 977 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 DCDC2Q9UHG0 476 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 ZNF510Q9Y2H8 683 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 TDRKHQ9Y2W6 561 aaKnown RBP4.93□□□□□ -1.62
SRP54-211ENST00000556445 ARL2BPQ9Y2Y0 163 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 NAALAD2Q9Y3Q0 740 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 MFHAS1Q9Y4C4 1052 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 LTBP2Q14767 1821 aa4.93□□□□□ -1.62
SRP54-211ENST00000556445 A0A1B0GWJ7 208 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms