RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 NTMT1Q9BV86 223 aa10.83□□□□□ -0.68
SLIRP-205ENST00000556310 C1QTNF3Q9BXJ4 246 aa10.83□□□□□ -0.68
SLIRP-205ENST00000556310 ILKAPQ9H0C8 392 aaPredicted RBP10.83□□□□□ -0.68
SLIRP-205ENST00000556310 NOL11Q9H8H0 719 aaKnown RBP10.83□□□□□ -0.68
SLIRP-205ENST00000556310 PRDM7Q9NQW5 492 aa10.83□□□□□ -0.68
SLIRP-205ENST00000556310 TMEM216Q9P0N5 145 aa10.83□□□□□ -0.68
SLIRP-205ENST00000556310 LUZP4Q9P127 313 aa10.83□□□□□ -0.68
SLIRP-205ENST00000556310 PTGFRNQ9P2B2 879 aa10.83□□□□□ -0.68
SLIRP-205ENST00000556310 TBK1Q9UHD2 729 aa10.83□□□□□ -0.68
SLIRP-205ENST00000556310 DAPP1Q9UN19 280 aa10.83□□□□□ -0.68
SLIRP-205ENST00000556310 SYNDIG1LA6NDD5 238 aa10.82□□□□□ -0.68
SLIRP-205ENST00000556310 ESPNB1AK53 854 aa10.82□□□□□ -0.68
SLIRP-205ENST00000556310 FAM227AF5H4B4 570 aa10.82□□□□□ -0.68
SLIRP-205ENST00000556310 GOLGA8RI6L899 631 aa10.82□□□□□ -0.68
SLIRP-205ENST00000556310 OR7A17O14581 309 aa10.82□□□□□ -0.68
SLIRP-205ENST00000556310 TGFB1P01137 390 aa10.82□□□□□ -0.68
SLIRP-205ENST00000556310 TAC1P20366 129 aa10.82□□□□□ -0.68
SLIRP-205ENST00000556310 MAOAP21397 527 aa10.82□□□□□ -0.68
SLIRP-205ENST00000556310 HIST1H1TP22492 207 aaPredicted RBP10.82□□□□□ -0.68
SLIRP-205ENST00000556310 ATP5A1P25705 553 aaKnown RBP10.82□□□□□ -0.68
SLIRP-205ENST00000556310 ARL1P40616 181 aaPredicted RBP10.82□□□□□ -0.68
SLIRP-205ENST00000556310 SSR2P43308 183 aa10.82□□□□□ -0.68
SLIRP-205ENST00000556310 TSFMP43897 325 aaKnown RBP10.82□□□□□ -0.68
SLIRP-205ENST00000556310 ARFIP1P53367 373 aa10.82□□□□□ -0.68
SLIRP-205ENST00000556310 LIM2P55344 173 aa10.82□□□□□ -0.68
SLIRP-205ENST00000556310 HSD17B7P56937 341 aa10.82□□□□□ -0.68
SLIRP-205ENST00000556310 SLC26A5P58743 744 aa10.82□□□□□ -0.68
SLIRP-205ENST00000556310 BTG2P78543 158 aa10.82□□□□□ -0.68
SLIRP-205ENST00000556310 ACTN3Q08043 901 aaPredicted RBP10.82□□□□□ -0.68
SLIRP-205ENST00000556310 CPSF6Q16630 551 aaKnown RBP eCLIP10.82□□□□□ -0.68
SLIRP-205ENST00000556310 GGTA1PQ4G0N0 100 aa10.82□□□□□ -0.68
SLIRP-205ENST00000556310 C10orf62Q5T681 223 aaPredicted RBP10.82□□□□□ -0.68
SLIRP-205ENST00000556310 DEPDC1Q5TB30 811 aa10.82□□□□□ -0.68
SLIRP-205ENST00000556310 ZNF793Q6ZN11 406 aa10.82□□□□□ -0.68
SLIRP-205ENST00000556310 ZNF595Q8IYB9 648 aa10.82□□□□□ -0.68
SLIRP-205ENST00000556310 IQCKQ8N0W5 287 aa10.82□□□□□ -0.68
SLIRP-205ENST00000556310 FAM47BQ8NA70 645 aa10.82□□□□□ -0.68
SLIRP-205ENST00000556310 M1APQ8TC57 530 aa10.82□□□□□ -0.68
SLIRP-205ENST00000556310 CPT1CQ8TCG5 803 aa10.82□□□□□ -0.68
SLIRP-205ENST00000556310 ZNF483Q8TF39 744 aaPredicted RBP10.82□□□□□ -0.68
SLIRP-205ENST00000556310 ATP6V1E2Q96A05 226 aa10.82□□□□□ -0.68
SLIRP-205ENST00000556310 NSUN5Q96P11 429 aaKnown RBP10.82□□□□□ -0.68
SLIRP-205ENST00000556310 MTERF1Q99551 399 aaKnown RBP10.82□□□□□ -0.68
SLIRP-205ENST00000556310 RNF32Q9H0A6 362 aa10.82□□□□□ -0.68
SLIRP-205ENST00000556310 OR51B5Q9H339 312 aa10.82□□□□□ -0.68
SLIRP-205ENST00000556310 ZBTB26Q9HCK0 441 aa10.82□□□□□ -0.68
SLIRP-205ENST00000556310 LYRM4Q9HD34 91 aa10.82□□□□□ -0.68
SLIRP-205ENST00000556310 MMP25Q9NPA2 562 aa10.82□□□□□ -0.68
SLIRP-205ENST00000556310 TEKT2Q9UIF3 430 aa10.82□□□□□ -0.68
SLIRP-205ENST00000556310 PPT2Q9UMR5 302 aa10.82□□□□□ -0.68
SLIRP-205ENST00000556310 RNF11Q9Y3C5 154 aa10.82□□□□□ -0.68
SLIRP-205ENST00000556310 CSAG2Q9Y5P2 127 aa10.82□□□□□ -0.68
SLIRP-205ENST00000556310 LRRK2Q5S007 2527 aa10.82□□□□□ -0.68
SLIRP-205ENST00000556310 DYTNA2CJ06 578 aa10.81□□□□□ -0.68
SLIRP-205ENST00000556310 SAGE2PA6NJ88 616 aa10.81□□□□□ -0.68
SLIRP-205ENST00000556310 RTCAO00442 366 aaKnown RBP10.81□□□□□ -0.68
SLIRP-205ENST00000556310 CYR61O00622 381 aa10.81□□□□□ -0.68
SLIRP-205ENST00000556310 CLDN4O14493 209 aa10.81□□□□□ -0.68
SLIRP-205ENST00000556310 CDH16O75309 829 aa10.81□□□□□ -0.68
SLIRP-205ENST00000556310 GLRA3O75311 464 aa10.81□□□□□ -0.68
SLIRP-205ENST00000556310 SH3BGRLO75368 114 aa10.81□□□□□ -0.68
SLIRP-205ENST00000556310 OTCP00480 354 aa10.81□□□□□ -0.68
SLIRP-205ENST00000556310 ATP5F1P24539 256 aaPredicted RBP10.81□□□□□ -0.68
SLIRP-205ENST00000556310 HSD17B3P37058 310 aa10.81□□□□□ -0.68
SLIRP-205ENST00000556310 SLCO1A2P46721 670 aa10.81□□□□□ -0.68
SLIRP-205ENST00000556310 RAP1GDS1P52306 607 aa10.81□□□□□ -0.68
SLIRP-205ENST00000556310 HNRNPFP52597 415 aaKnown RBP10.81□□□□□ -0.68
SLIRP-205ENST00000556310 RPS13P62277 151 aaKnown RBP10.81□□□□□ -0.68
SLIRP-205ENST00000556310 HERVK_113P63132 956 aa10.81□□□□□ -0.68
SLIRP-205ENST00000556310 TERF2Q15554 542 aa10.81□□□□□ -0.68
SLIRP-205ENST00000556310 ZRSR2Q15696 482 aaKnown RBP10.81□□□□□ -0.68
SLIRP-205ENST00000556310 AP5B1Q2VPB7 878 aa10.81□□□□□ -0.68
SLIRP-205ENST00000556310 PLEKHN1Q494U1 663 aaPredicted RBP10.81□□□□□ -0.68
SLIRP-205ENST00000556310 PRR30Q53SZ7 412 aaPredicted RBP10.81□□□□□ -0.68
SLIRP-205ENST00000556310 ABHD17BQ5VST6 288 aa10.81□□□□□ -0.68
SLIRP-205ENST00000556310 B3GNTL1Q67FW5 361 aaPredicted RBP10.81□□□□□ -0.68
SLIRP-205ENST00000556310 H3F3CQ6NXT2 135 aa10.81□□□□□ -0.68
SLIRP-205ENST00000556310 WDR93Q6P2C0 686 aa10.81□□□□□ -0.68
SLIRP-205ENST00000556310 CUZD1Q86UP6 607 aa10.81□□□□□ -0.68
SLIRP-205ENST00000556310 ATCAYQ86WG3 371 aa10.81□□□□□ -0.68
SLIRP-205ENST00000556310 RNF175Q8N4F7 328 aa10.81□□□□□ -0.68
SLIRP-205ENST00000556310 ACOT4Q8N9L9 421 aa10.81□□□□□ -0.68
SLIRP-205ENST00000556310 TMEM52Q8NDY8 209 aa10.81□□□□□ -0.68
SLIRP-205ENST00000556310 WDR20Q8TBZ3 569 aa10.81□□□□□ -0.68
SLIRP-205ENST00000556310 EPS8L3Q8TE67 593 aaKnown RBP10.81□□□□□ -0.68
SLIRP-205ENST00000556310 RGMAQ96B86 450 aa10.81□□□□□ -0.68
SLIRP-205ENST00000556310 CNDP1Q96KN2 507 aa10.81□□□□□ -0.68
SLIRP-205ENST00000556310 MAGEB10Q96LZ2 347 aaPredicted RBP10.81□□□□□ -0.68
SLIRP-205ENST00000556310 CDK15Q96Q40 435 aa10.81□□□□□ -0.68
SLIRP-205ENST00000556310 CSF3RQ99062 836 aa10.81□□□□□ -0.68
SLIRP-205ENST00000556310 ERVK-6Q9BXR3 956 aa10.81□□□□□ -0.68
SLIRP-205ENST00000556310 CLMPQ9H6B4 373 aa10.81□□□□□ -0.68
SLIRP-205ENST00000556310 SEMA4BQ9NPR2 832 aaPredicted RBP10.81□□□□□ -0.68
SLIRP-205ENST00000556310 NECTIN3Q9NQS3 549 aa10.81□□□□□ -0.68
SLIRP-205ENST00000556310 PRTFDC1Q9NRG1 225 aa10.81□□□□□ -0.68
SLIRP-205ENST00000556310 PSD3Q9NYI0 1048 aa10.81□□□□□ -0.68
SLIRP-205ENST00000556310 DCDC2Q9UHG0 476 aa10.81□□□□□ -0.68
SLIRP-205ENST00000556310 PLAAQ9Y263 795 aa10.81□□□□□ -0.68
SLIRP-205ENST00000556310 SPACA6W5XKT8 324 aa10.81□□□□□ -0.68
SLIRP-205ENST00000556310 A0A1W2PPM1 405 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms