RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 DOCK6Q96HP0 2047 aa6.7□□□□□ -1.34
TDP1-213ENST00000555880 A0A1W2PRB8 838 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 TRBC2A0A5B9 178 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 ARRDC5A6NEK1 342 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 TMEM221A6NGB7 291 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 METTL15A6NJ78 407 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 PSMD11O00231 422 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 SAP18O00422 153 aaKnown RBP6.69□□□□□ -1.34
TDP1-213ENST00000555880 NPC1O15118 1278 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 SIAH2O43255 324 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 AQP9O43315 295 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 LILRB3O75022 631 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 ADAM23O75077 832 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 GCM2O75603 506 aaPredicted RBP6.69□□□□□ -1.34
TDP1-213ENST00000555880 FGF18O76093 207 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 MED26O95402 600 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 TGFB1P01137 390 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 GBAP04062 536 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 STSP08842 583 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 HSMCR30P0CW71 290 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 ADORA3P0DMS8 318 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 SNRPBP14678 240 aaKnown RBP6.69□□□□□ -1.34
TDP1-213ENST00000555880 NPPBP16860 134 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 RHCEP18577 417 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 PDHA2P29803 388 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 XCR1P46094 333 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 MVDP53602 400 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 CASP9P55211 416 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 DEFA1P59665 94 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 DEFA3P59666 94 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 DSTNP60981 165 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 ST8SIA6P61647 398 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 IFITM3Q01628 133 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 ZNF45Q02386 682 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 CDC20Q12834 499 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 SLC5A12Q1EHB4 618 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 POM121L1PQ3SYA9 428 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 BCL7AQ4VC05 210 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 ZNF385BQ569K4 471 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 ARMCX4Q5H9R4 360 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 COLEC12Q5KU26 742 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 LY6G5CQ5SRR4 150 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 CATSPEREQ5SY80 951 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 TPRG1LQ5T0D9 272 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 REEP3Q6NUK4 255 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 FBXO46Q6PJ61 603 aaPredicted RBP6.69□□□□□ -1.34
TDP1-213ENST00000555880 ZNF852Q6ZMS4 543 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 NCCRP1Q6ZVX7 275 aaPredicted RBP6.69□□□□□ -1.34
TDP1-213ENST00000555880 OTOP2Q7RTS6 562 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 TECPR1Q7Z6L1 1165 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 NLRP8Q86W28 1048 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 SNX29P2Q8IUI4 249 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 CCDC103Q8IW40 242 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 CADM3Q8N126 398 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 KRT78Q8N1N4 520 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 LILRA3Q8N6C8 439 aaPredicted RBP6.69□□□□□ -1.34
TDP1-213ENST00000555880 OR9A1PQ8NGU1 263 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 OR5AK3PQ8NH89 298 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 CYB5D2Q8WUJ1 264 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 GTPBP3Q969Y2 492 aaKnown RBP6.69□□□□□ -1.34
TDP1-213ENST00000555880 CIDECQ96AQ7 238 aaPredicted RBP6.69□□□□□ -1.34
TDP1-213ENST00000555880 PPP1R16AQ96I34 528 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 ZNF514Q96K75 400 aaPredicted RBP6.69□□□□□ -1.34
TDP1-213ENST00000555880 RAD9AQ99638 391 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 WRAP53Q9BUR4 548 aaKnown RBP6.69□□□□□ -1.34
TDP1-213ENST00000555880 BTBD2Q9BX70 525 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 SGPP1Q9BX95 441 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 ALOXE3Q9BYJ1 711 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 KLHL25Q9H0H3 589 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 OR51B5Q9H339 312 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 RLIMQ9NVW2 624 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 MS4A12Q9NXJ0 267 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 AHSPQ9NZD4 102 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 RAB23Q9ULC3 237 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 TMCC3Q9ULS5 477 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 CFL2Q9Y281 166 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 UGT2A1Q9Y4X1 527 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 SNX8Q9Y5X2 465 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 PEX16Q9Y5Y5 336 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 ENPP4Q9Y6X5 453 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 KIF26AQ9ULI4 1882 aaPredicted RBP6.69□□□□□ -1.34
TDP1-213ENST00000555880 PRRC2BQ5JSZ5 2229 aaKnown RBP6.69□□□□□ -1.34
TDP1-213ENST00000555880 LTBP2Q14767 1821 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 KIAA1549LQ6ZVL6 1849 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 ALPK3Q96L96 1907 aa6.69□□□□□ -1.34
TDP1-213ENST00000555880 TMEM229AB2RXF0 380 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 M0R082 166 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 KPNA3O00505 521 aaPredicted RBP6.68□□□□□ -1.34
TDP1-213ENST00000555880 PI15O43692 258 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 CXCL14O95715 111 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 DLGAP3O95886 979 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 PTTG1O95997 202 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 TIMP1P01033 207 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 KLK1P06870 262 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 ARAFP10398 606 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 POU2F1P14859 743 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 UQCRC2P22695 453 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 TGFBR1P36897 503 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 RGS6P49758 472 aa6.68□□□□□ -1.34
TDP1-213ENST00000555880 CYP4F2P78329 520 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms