RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 FAM46CQ5VWP2 391 aa2.44□□□□□ -2.02
SNX6-204ENST00000555541 PLPP4Q5VZY2 271 aa2.44□□□□□ -2.02
SNX6-204ENST00000555541 NEPROQ6NW34 567 aa2.44□□□□□ -2.02
SNX6-204ENST00000555541 C17orf107Q6ZR85 190 aa2.44□□□□□ -2.02
SNX6-204ENST00000555541 CHST3Q7LGC8 479 aa2.44□□□□□ -2.02
SNX6-204ENST00000555541 KRT74Q7RTS7 529 aa2.44□□□□□ -2.02
SNX6-204ENST00000555541 PRR22Q8IZ63 422 aa2.44□□□□□ -2.02
SNX6-204ENST00000555541 SLC43A2Q8N370 569 aa2.44□□□□□ -2.02
SNX6-204ENST00000555541 ZNRF1Q8ND25 227 aa2.44□□□□□ -2.02
SNX6-204ENST00000555541 GTSF1Q8WW33 167 aa2.44□□□□□ -2.02
SNX6-204ENST00000555541 PHYHIPLQ96FC7 376 aa2.44□□□□□ -2.02
SNX6-204ENST00000555541 ZNF285Q96NJ3 590 aa2.44□□□□□ -2.02
SNX6-204ENST00000555541 FAM129AQ9BZQ8 928 aa2.44□□□□□ -2.02
SNX6-204ENST00000555541 TMOD3Q9NYL9 352 aa2.44□□□□□ -2.02
SNX6-204ENST00000555541 CCL27Q9Y4X3 112 aa2.44□□□□□ -2.02
SNX6-204ENST00000555541 KAT6BQ8WYB5 2073 aa2.44□□□□□ -2.02
SNX6-204ENST00000555541 A0A087WV48 116 aa2.43□□□□□ -2.02
SNX6-204ENST00000555541 ANXA2P2A6NMY6 339 aa2.43□□□□□ -2.02
SNX6-204ENST00000555541 P4HA2O15460 535 aa2.43□□□□□ -2.02
SNX6-204ENST00000555541 P2RX6O15547 441 aa2.43□□□□□ -2.02
SNX6-204ENST00000555541 CCDC175P0C221 793 aa2.43□□□□□ -2.02
SNX6-204ENST00000555541 FASP25445 335 aa2.43□□□□□ -2.02
SNX6-204ENST00000555541 PSMB4P28070 264 aa2.43□□□□□ -2.02
SNX6-204ENST00000555541 EEF1DP29692 281 aaKnown RBP2.43□□□□□ -2.02
SNX6-204ENST00000555541 IST1P53990 364 aa2.43□□□□□ -2.02
SNX6-204ENST00000555541 RPP38P78345 283 aaKnown RBP2.43□□□□□ -2.02
SNX6-204ENST00000555541 CAMK2DQ13557 499 aa2.43□□□□□ -2.02
SNX6-204ENST00000555541 RASA2Q15283 850 aa2.43□□□□□ -2.02
SNX6-204ENST00000555541 REP15Q6BDI9 236 aa2.43□□□□□ -2.02
SNX6-204ENST00000555541 TXNRD3NBQ6F5E7 133 aa2.43□□□□□ -2.02
SNX6-204ENST00000555541 ZNF600Q6ZNG1 722 aa2.43□□□□□ -2.02
SNX6-204ENST00000555541 RFPL4BQ6ZWI9 263 aa2.43□□□□□ -2.02
SNX6-204ENST00000555541 ERN2Q76MJ5 926 aaKnown RBP2.43□□□□□ -2.02
SNX6-204ENST00000555541 NAXDQ8IW45 347 aa2.43□□□□□ -2.02
SNX6-204ENST00000555541 CCAR2Q8N163 923 aaKnown RBP2.43□□□□□ -2.02
SNX6-204ENST00000555541 CARNMT1Q8N4J0 409 aa2.43□□□□□ -2.02
SNX6-204ENST00000555541 IQUBQ8NA54 791 aa2.43□□□□□ -2.02
SNX6-204ENST00000555541 OCC1Q8TAD7 63 aa2.43□□□□□ -2.02
SNX6-204ENST00000555541 SLC35C1Q96A29 364 aa2.43□□□□□ -2.02
SNX6-204ENST00000555541 NUS1Q96E22 293 aa2.43□□□□□ -2.02
SNX6-204ENST00000555541 TXLNGYQ9BZA5 131 aa2.43□□□□□ -2.02
SNX6-204ENST00000555541 LMAN1LQ9HAT1 526 aa2.43□□□□□ -2.02
SNX6-204ENST00000555541 RAB9BQ9NP90 201 aa2.43□□□□□ -2.02
SNX6-204ENST00000555541 ANKEF1Q9NU02 776 aa2.43□□□□□ -2.02
SNX6-204ENST00000555541 NOCTQ9UK39 431 aaKnown RBP2.43□□□□□ -2.02
SNX6-204ENST00000555541 A0A0B4J203 849 aa2.42□□□□□ -2.02
SNX6-204ENST00000555541 KLF18A0A0U1RQI7 1052 aa2.42□□□□□ -2.02
SNX6-204ENST00000555541 C2orf92A0A1B0GVN3 265 aa2.42□□□□□ -2.02
SNX6-204ENST00000555541 HDAC3O15379 428 aa2.42□□□□□ -2.02
SNX6-204ENST00000555541 LBPP18428 481 aa2.42□□□□□ -2.02
SNX6-204ENST00000555541 SRD5A2P31213 254 aa2.42□□□□□ -2.02
SNX6-204ENST00000555541 RAD52P43351 418 aa2.42□□□□□ -2.02
SNX6-204ENST00000555541 NAGLUP54802 743 aa2.42□□□□□ -2.02
SNX6-204ENST00000555541 ADARP55265 1226 aaKnown RBP2.42□□□□□ -2.02
SNX6-204ENST00000555541 PTENP60484 403 aa2.42□□□□□ -2.02
SNX6-204ENST00000555541 C2orf83Q53S99 150 aa2.42□□□□□ -2.02
SNX6-204ENST00000555541 ARMCX4Q5H9R4 360 aa2.42□□□□□ -2.02
SNX6-204ENST00000555541 SPOUT1Q5T280 376 aaKnown RBP2.42□□□□□ -2.02
SNX6-204ENST00000555541 MFSD4BQ5TF39 518 aa2.42□□□□□ -2.02
SNX6-204ENST00000555541 CGB2Q6NT52 195 aa2.42□□□□□ -2.02
SNX6-204ENST00000555541 RPUSD3Q6P087 351 aaKnown RBP2.42□□□□□ -2.02
SNX6-204ENST00000555541 ADCK2Q7Z695 626 aa2.42□□□□□ -2.02
SNX6-204ENST00000555541 DNAJB7Q7Z6W7 309 aaPredicted RBP2.42□□□□□ -2.02
SNX6-204ENST00000555541 TDHQ8IZJ6 230 aa2.42□□□□□ -2.02
SNX6-204ENST00000555541 ZNF781Q8N8C0 355 aa2.42□□□□□ -2.02
SNX6-204ENST00000555541 C8orf46Q8TAG6 207 aa2.42□□□□□ -2.02
SNX6-204ENST00000555541 HEXDCQ8WVB3 486 aa2.42□□□□□ -2.02
SNX6-204ENST00000555541 VPS33AQ96AX1 596 aa2.42□□□□□ -2.02
SNX6-204ENST00000555541 BPIFA2Q96DR5 249 aa2.42□□□□□ -2.02
SNX6-204ENST00000555541 PPP1R16AQ96I34 528 aa2.42□□□□□ -2.02
SNX6-204ENST00000555541 MCCC1Q96RQ3 725 aaPredicted RBP2.42□□□□□ -2.02
SNX6-204ENST00000555541 DEFB126Q9BYW3 111 aa2.42□□□□□ -2.02
SNX6-204ENST00000555541 TRIM7Q9C029 511 aa2.42□□□□□ -2.02
SNX6-204ENST00000555541 UBA5Q9GZZ9 404 aa2.42□□□□□ -2.02
SNX6-204ENST00000555541 ZBP1Q9H171 429 aa2.42□□□□□ -2.02
SNX6-204ENST00000555541 RABEP2Q9H5N1 569 aa2.42□□□□□ -2.02
SNX6-204ENST00000555541 SH3GLB2Q9NR46 395 aa2.42□□□□□ -2.02
SNX6-204ENST00000555541 IL17CQ9P0M4 197 aa2.42□□□□□ -2.02
SNX6-204ENST00000555541 RSPH14Q9UHP6 348 aa2.42□□□□□ -2.02
SNX6-204ENST00000555541 ITGA11Q9UKX5 1188 aa2.42□□□□□ -2.02
SNX6-204ENST00000555541 FBXO7Q9Y3I1 522 aa2.42□□□□□ -2.02
SNX6-204ENST00000555541 HBS1LQ9Y450 684 aaKnown RBP2.42□□□□□ -2.02
SNX6-204ENST00000555541 PCDHGA1Q9Y5H4 931 aa2.42□□□□□ -2.02
SNX6-204ENST00000555541 ZSCAN5CA6NGD5 496 aaPredicted RBP2.41□□□□□ -2.02
SNX6-204ENST00000555541 ZNF724A8MTY0 619 aa2.41□□□□□ -2.02
SNX6-204ENST00000555541 E7ENQ6 273 aa2.41□□□□□ -2.02
SNX6-204ENST00000555541 ACSL4O60488 711 aa2.41□□□□□ -2.02
SNX6-204ENST00000555541 IGHG3P01860 377 aa2.41□□□□□ -2.02
SNX6-204ENST00000555541 ANKRD34CP0C6C1 535 aa2.41□□□□□ -2.02
SNX6-204ENST00000555541 C17orf58Q2M2W7 97 aa2.41□□□□□ -2.02
SNX6-204ENST00000555541 SLC30A6Q6NXT4 461 aa2.41□□□□□ -2.02
SNX6-204ENST00000555541 CCDC186Q7Z3E2 898 aa2.41□□□□□ -2.02
SNX6-204ENST00000555541 PHLDB2Q86SQ0 1253 aa2.41□□□□□ -2.02
SNX6-204ENST00000555541 MEX3DQ86XN8 651 aaKnown RBP2.41□□□□□ -2.02
SNX6-204ENST00000555541 ELMOD1Q8N336 334 aa2.41□□□□□ -2.02
SNX6-204ENST00000555541 TMEM99Q8N816 258 aa2.41□□□□□ -2.02
SNX6-204ENST00000555541 CLEC1AQ8NC01 280 aa2.41□□□□□ -2.02
SNX6-204ENST00000555541 BEST4Q8NFU0 473 aa2.41□□□□□ -2.02
SNX6-204ENST00000555541 OR13C5Q8NGS8 318 aa2.41□□□□□ -2.02
SNX6-204ENST00000555541 ST6GALNAC6Q969X2 333 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms