RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 TRBC2A0A5B9 178 aa1.8□□□□□ -2.12
SRP54-207ENST00000555535 TMEM150CB9EJG8 249 aa1.8□□□□□ -2.12
SRP54-207ENST00000555535 PGRMC2O15173 223 aa1.8□□□□□ -2.12
SRP54-207ENST00000555535 SKILP12757 684 aa1.8□□□□□ -2.12
SRP54-207ENST00000555535 ACAT1P24752 427 aaKnown RBP1.8□□□□□ -2.12
SRP54-207ENST00000555535 RGS7P49802 495 aa1.8□□□□□ -2.12
SRP54-207ENST00000555535 LBHQ53QV2 105 aaPredicted RBP1.8□□□□□ -2.12
SRP54-207ENST00000555535 DDX59Q5T1V6 619 aaKnown RBP eCLIP1.8□□□□□ -2.12
SRP54-207ENST00000555535 GPR157Q5UAW9 335 aa1.8□□□□□ -2.12
SRP54-207ENST00000555535 ENPP7Q6UWV6 458 aa1.8□□□□□ -2.12
SRP54-207ENST00000555535 BTNL8Q6UX41 500 aa1.8□□□□□ -2.12
SRP54-207ENST00000555535 C17orf107Q6ZR85 190 aa1.8□□□□□ -2.12
SRP54-207ENST00000555535 RBPMS2Q6ZRY4 209 aaKnown RBP1.8□□□□□ -2.12
SRP54-207ENST00000555535 GPR141Q7Z602 305 aa1.8□□□□□ -2.12
SRP54-207ENST00000555535 CROCCP3Q8IVE0 287 aa1.8□□□□□ -2.12
SRP54-207ENST00000555535 FAM219AQ8IW50 185 aa1.8□□□□□ -2.12
SRP54-207ENST00000555535 ENTHD1Q8IYW4 607 aa1.8□□□□□ -2.12
SRP54-207ENST00000555535 CEND1Q8N111 149 aa1.8□□□□□ -2.12
SRP54-207ENST00000555535 ZNF491Q8N8L2 437 aa1.8□□□□□ -2.12
SRP54-207ENST00000555535 CAMKVQ8NCB2 501 aa1.8□□□□□ -2.12
SRP54-207ENST00000555535 EXT2Q93063 718 aa1.8□□□□□ -2.12
SRP54-207ENST00000555535 ZNF558Q96NG5 402 aa1.8□□□□□ -2.12
SRP54-207ENST00000555535 FN3KQ9H479 309 aa1.8□□□□□ -2.12
SRP54-207ENST00000555535 MYH16Q9H6N6 1097 aa1.8□□□□□ -2.12
SRP54-207ENST00000555535 RPF1Q9H9Y2 349 aaKnown RBP1.8□□□□□ -2.12
SRP54-207ENST00000555535 ZFP92A6NM28 416 aa1.79□□□□□ -2.12
SRP54-207ENST00000555535 CCT8L1PA6NM43 557 aa1.79□□□□□ -2.12
SRP54-207ENST00000555535 P2RX6O15547 441 aa1.79□□□□□ -2.12
SRP54-207ENST00000555535 ZNF861PO60384 105 aa1.79□□□□□ -2.12
SRP54-207ENST00000555535 STAM2O75886 525 aa1.79□□□□□ -2.12
SRP54-207ENST00000555535 FGF19O95750 216 aa1.79□□□□□ -2.12
SRP54-207ENST00000555535 CPN1P15169 458 aa1.79□□□□□ -2.12
SRP54-207ENST00000555535 NNMTP40261 264 aa1.79□□□□□ -2.12
SRP54-207ENST00000555535 ALDH3B1P43353 468 aa1.79□□□□□ -2.12
SRP54-207ENST00000555535 CDX1P47902 265 aaPredicted RBP1.79□□□□□ -2.12
SRP54-207ENST00000555535 SLC25A1P53007 311 aa1.79□□□□□ -2.12
SRP54-207ENST00000555535 MECOMQ03112 1051 aa1.79□□□□□ -2.12
SRP54-207ENST00000555535 CRY2Q49AN0 593 aa1.79□□□□□ -2.12
SRP54-207ENST00000555535 AGAP6Q5VW22 663 aa1.79□□□□□ -2.12
SRP54-207ENST00000555535 LIPJQ5W064 366 aa1.79□□□□□ -2.12
SRP54-207ENST00000555535 SLC43A2Q8N370 569 aa1.79□□□□□ -2.12
SRP54-207ENST00000555535 Q8N9L7 120 aa1.79□□□□□ -2.12
SRP54-207ENST00000555535 CCT8L2Q96SF2 557 aa1.79□□□□□ -2.12
SRP54-207ENST00000555535 GTPBP2Q9BX10 602 aaKnown RBP1.79□□□□□ -2.12
SRP54-207ENST00000555535 DPEP2Q9H4A9 486 aa1.79□□□□□ -2.12
SRP54-207ENST00000555535 ISG20L2Q9H9L3 353 aaKnown RBP1.79□□□□□ -2.12
SRP54-207ENST00000555535 NMUR1Q9HB89 426 aa1.79□□□□□ -2.12
SRP54-207ENST00000555535 SH3GLB2Q9NR46 395 aa1.79□□□□□ -2.12
SRP54-207ENST00000555535 NACAE9PAV3 2078 aa1.78□□□□□ -2.12
SRP54-207ENST00000555535 IGHV3-35A0A0C4DH35 117 aa1.78□□□□□ -2.12
SRP54-207ENST00000555535 ANKRD18BA2A2Z9 1011 aa1.78□□□□□ -2.12
SRP54-207ENST00000555535 NPIPA3F8WFD2 350 aa1.78□□□□□ -2.12
SRP54-207ENST00000555535 CALCAP01258 141 aa1.78□□□□□ -2.12
SRP54-207ENST00000555535 ASNSP08243 561 aa1.78□□□□□ -2.12
SRP54-207ENST00000555535 OR9G9P0C7N8 305 aa1.78□□□□□ -2.12
SRP54-207ENST00000555535 DLATP10515 647 aaKnown RBP1.78□□□□□ -2.12
SRP54-207ENST00000555535 GMPSP49915 693 aaPredicted RBP1.78□□□□□ -2.12
SRP54-207ENST00000555535 CLNS1AP54105 237 aaKnown RBP1.78□□□□□ -2.12
SRP54-207ENST00000555535 EIF5P55010 431 aaKnown RBP1.78□□□□□ -2.12
SRP54-207ENST00000555535 MFAP3P55082 362 aa1.78□□□□□ -2.12
SRP54-207ENST00000555535 RFTN2Q52LD8 501 aaPredicted RBP1.78□□□□□ -2.12
SRP54-207ENST00000555535 ARMCX4Q5H9R4 360 aa1.78□□□□□ -2.12
SRP54-207ENST00000555535 SLC27A4Q6P1M0 643 aa1.78□□□□□ -2.12
SRP54-207ENST00000555535 POGLUT1Q8NBL1 392 aa1.78□□□□□ -2.12
SRP54-207ENST00000555535 SLC26A7Q8TE54 656 aa1.78□□□□□ -2.12
SRP54-207ENST00000555535 TBCKQ8TEA7 893 aa1.78□□□□□ -2.12
SRP54-207ENST00000555535 AFAP1L1Q8TED9 768 aa1.78□□□□□ -2.12
SRP54-207ENST00000555535 VSIG2Q96IQ7 327 aa1.78□□□□□ -2.12
SRP54-207ENST00000555535 MAGEB18Q96M61 343 aa1.78□□□□□ -2.12
SRP54-207ENST00000555535 KATNB1Q9BVA0 655 aa1.78□□□□□ -2.12
SRP54-207ENST00000555535 IKZF5Q9H5V7 419 aa1.78□□□□□ -2.12
SRP54-207ENST00000555535 RAB9BQ9NP90 201 aa1.78□□□□□ -2.12
SRP54-207ENST00000555535 RNF24Q9Y225 148 aa1.78□□□□□ -2.12
SRP54-207ENST00000555535 RUVBL2Q9Y230 463 aaKnown RBP1.78□□□□□ -2.12
SRP54-207ENST00000555535 SH3GLB1Q9Y371 365 aa1.78□□□□□ -2.12
SRP54-207ENST00000555535 SPRR5A0A1B0GTR4 108 aa1.77□□□□□ -2.13
SRP54-207ENST00000555535 PINLYPA6NC86 204 aa1.77□□□□□ -2.13
SRP54-207ENST00000555535 FAM231BA6NCW3 169 aa1.77□□□□□ -2.13
SRP54-207ENST00000555535 OR5H15A6NDH6 313 aa1.77□□□□□ -2.13
SRP54-207ENST00000555535 FRG2CA6NGY1 282 aa1.77□□□□□ -2.13
SRP54-207ENST00000555535 AHCYL1O43865 530 aa1.77□□□□□ -2.13
SRP54-207ENST00000555535 LUC7L3O95232 432 aaKnown RBP1.77□□□□□ -2.13
SRP54-207ENST00000555535 APBB3O95704 486 aa1.77□□□□□ -2.13
SRP54-207ENST00000555535 CCDC159P0C7I6 412 aa1.77□□□□□ -2.13
SRP54-207ENST00000555535 NR2F1P10589 423 aa1.77□□□□□ -2.13
SRP54-207ENST00000555535 PGAM2P15259 253 aa1.77□□□□□ -2.13
SRP54-207ENST00000555535 ID1P41134 155 aa1.77□□□□□ -2.13
SRP54-207ENST00000555535 OR3A3P47888 321 aa1.77□□□□□ -2.13
SRP54-207ENST00000555535 FNTAP49354 379 aa1.77□□□□□ -2.13
SRP54-207ENST00000555535 RAB28P51157 221 aa1.77□□□□□ -2.13
SRP54-207ENST00000555535 NDST1P52848 882 aa1.77□□□□□ -2.13
SRP54-207ENST00000555535 WNT4P56705 351 aa1.77□□□□□ -2.13
SRP54-207ENST00000555535 IFI35P80217 286 aaPredicted RBP1.77□□□□□ -2.13
SRP54-207ENST00000555535 C9orf152Q5JTZ5 239 aa1.77□□□□□ -2.13
SRP54-207ENST00000555535 WDR78Q5VTH9 848 aa1.77□□□□□ -2.13
SRP54-207ENST00000555535 PLPP4Q5VZY2 271 aa1.77□□□□□ -2.13
SRP54-207ENST00000555535 KLHL10Q6JEL2 608 aa1.77□□□□□ -2.13
SRP54-207ENST00000555535 PI4KAP1Q8N8J0 262 aa1.77□□□□□ -2.13
SRP54-207ENST00000555535 OR2L5Q8NG80 312 aa1.77□□□□□ -2.13
SRP54-207ENST00000555535 SLC35C1Q96A29 364 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms