RNA–Protein interactions for RNA: ENST00000554974.5

XRCC3-210, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4 BASIC

Gene XRCC3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-210ENST00000554974 KLRC4-KLRK1H3BQV0 150 aa14.03□□□□□ -0.16
XRCC3-210ENST00000554974 CDK2AP1O14519 115 aa14.03□□□□□ -0.16
XRCC3-210ENST00000554974 ITGA10O75578 1167 aa14.03□□□□□ -0.16
XRCC3-210ENST00000554974 ABHD2P08910 425 aa14.03□□□□□ -0.16
XRCC3-210ENST00000554974 TFEBP19484 476 aa14.03□□□□□ -0.16
XRCC3-210ENST00000554974 AHRP35869 848 aa14.03□□□□□ -0.16
XRCC3-210ENST00000554974 AP1S2P56377 157 aa14.03□□□□□ -0.16
XRCC3-210ENST00000554974 IL2P60568 153 aa14.03□□□□□ -0.16
XRCC3-210ENST00000554974 PDAP1Q13442 181 aaKnown RBP14.03□□□□□ -0.16
XRCC3-210ENST00000554974 TOR1AIP1Q5JTV8 583 aa14.03□□□□□ -0.16
XRCC3-210ENST00000554974 NIPAL1Q6NVV3 410 aa14.03□□□□□ -0.16
XRCC3-210ENST00000554974 WDR93Q6P2C0 686 aa14.03□□□□□ -0.16
XRCC3-210ENST00000554974 C16orf47Q6ZP98 133 aaPredicted RBP14.03□□□□□ -0.16
XRCC3-210ENST00000554974 CCDC71Q8IV32 467 aaPredicted RBP14.03□□□□□ -0.16
XRCC3-210ENST00000554974 CA13Q8N1Q1 262 aa14.03□□□□□ -0.16
XRCC3-210ENST00000554974 TMEM156Q8N614 296 aa14.03□□□□□ -0.16
XRCC3-210ENST00000554974 GPATCH11Q8N954 259 aa14.03□□□□□ -0.16
XRCC3-210ENST00000554974 ZFP62Q8NB50 900 aaPredicted RBP14.03□□□□□ -0.16
XRCC3-210ENST00000554974 B3GNT7Q8NFL0 401 aa14.03□□□□□ -0.16
XRCC3-210ENST00000554974 OR52N2Q8NGI0 321 aa14.03□□□□□ -0.16
XRCC3-210ENST00000554974 GPR22Q99680 433 aa14.03□□□□□ -0.16
XRCC3-210ENST00000554974 FBXW2Q9UKT8 454 aa14.03□□□□□ -0.16
XRCC3-210ENST00000554974 RNF6Q9Y252 685 aa14.03□□□□□ -0.16
XRCC3-210ENST00000554974 ZNF407Q9C0G0 2248 aa14.03□□□□□ -0.16
XRCC3-210ENST00000554974 A0A0G2JMM0 328 aa14.02□□□□□ -0.17
XRCC3-210ENST00000554974 A0A0G2JN53 185 aa14.02□□□□□ -0.17
XRCC3-210ENST00000554974 FAM95CA0A1B0GW59 222 aa14.02□□□□□ -0.17
XRCC3-210ENST00000554974 A0A1W2PPB8 328 aa14.02□□□□□ -0.17
XRCC3-210ENST00000554974 A0A1W2PRS3 328 aa14.02□□□□□ -0.17
XRCC3-210ENST00000554974 PINLYPA6NC86 204 aa14.02□□□□□ -0.17
XRCC3-210ENST00000554974 KIR3DP1A8MWS1 328 aa14.02□□□□□ -0.17
XRCC3-210ENST00000554974 TGFBR3LH3BV60 316 aa14.02□□□□□ -0.17
XRCC3-210ENST00000554974 DIAPH2O60879 1101 aa14.02□□□□□ -0.17
XRCC3-210ENST00000554974 WISP3O95389 354 aaPredicted RBP14.02□□□□□ -0.17
XRCC3-210ENST00000554974 ACSL3O95573 720 aa14.02□□□□□ -0.17
XRCC3-210ENST00000554974 CLCN2P51788 898 aa14.02□□□□□ -0.17
XRCC3-210ENST00000554974 TFF3Q07654 80 aa14.02□□□□□ -0.17
XRCC3-210ENST00000554974 EFTUD2Q15029 972 aaKnown RBP eCLIP14.02□□□□□ -0.17
XRCC3-210ENST00000554974 GRTP1Q5TC63 336 aa14.02□□□□□ -0.17
XRCC3-210ENST00000554974 SBSNQ6UWP8 590 aa14.02□□□□□ -0.17
XRCC3-210ENST00000554974 CTAGE3PQ8IX95 158 aa14.02□□□□□ -0.17
XRCC3-210ENST00000554974 GSPT2Q8IYD1 628 aaKnown RBP14.02□□□□□ -0.17
XRCC3-210ENST00000554974 PPM1NQ8N819 430 aa14.02□□□□□ -0.17
XRCC3-210ENST00000554974 ARMC2Q8NEN0 867 aa14.02□□□□□ -0.17
XRCC3-210ENST00000554974 C16orf52Q8NHV5 167 aa14.02□□□□□ -0.17
XRCC3-210ENST00000554974 EPB41L4BQ9H329 900 aa14.02□□□□□ -0.17
XRCC3-210ENST00000554974 LIN28AQ9H9Z2 209 aaKnown RBP14.02□□□□□ -0.17
XRCC3-210ENST00000554974 POPDC3Q9HBV1 291 aa14.02□□□□□ -0.17
XRCC3-210ENST00000554974 PNO1Q9NRX1 252 aaKnown RBP14.02□□□□□ -0.17
XRCC3-210ENST00000554974 DEPPQ9NTK1 212 aa14.02□□□□□ -0.17
XRCC3-210ENST00000554974 KCMF1Q9P0J7 381 aa14.02□□□□□ -0.17
XRCC3-210ENST00000554974 TXNDC16Q9P2K2 825 aa14.02□□□□□ -0.17
XRCC3-210ENST00000554974 PHF3Q92576 2039 aaKnown RBP14.02□□□□□ -0.17
XRCC3-210ENST00000554974 FAM166BA8MTA8 275 aa14.01□□□□□ -0.17
XRCC3-210ENST00000554974 RIPK2O43353 540 aa14.01□□□□□ -0.17
XRCC3-210ENST00000554974 PRKNO60260 465 aaPredicted RBP14.01□□□□□ -0.17
XRCC3-210ENST00000554974 TOXO94900 526 aa14.01□□□□□ -0.17
XRCC3-210ENST00000554974 SMIM10L1P0DMW3 83 aa14.01□□□□□ -0.17
XRCC3-210ENST00000554974 CHRNB4P30926 498 aa14.01□□□□□ -0.17
XRCC3-210ENST00000554974 HNRNPFP52597 415 aaKnown RBP14.01□□□□□ -0.17
XRCC3-210ENST00000554974 TAS2R39P59534 338 aa14.01□□□□□ -0.17
XRCC3-210ENST00000554974 VSNL1P62760 191 aa14.01□□□□□ -0.17
XRCC3-210ENST00000554974 POU4F1Q01851 419 aa14.01□□□□□ -0.17
XRCC3-210ENST00000554974 RBBP5Q15291 538 aaKnown RBP14.01□□□□□ -0.17
XRCC3-210ENST00000554974 ZKSCAN8Q15776 578 aaPredicted RBP14.01□□□□□ -0.17
XRCC3-210ENST00000554974 EMC4Q5J8M3 183 aa14.01□□□□□ -0.17
XRCC3-210ENST00000554974 ARHGAP11AQ6P4F7 1023 aa14.01□□□□□ -0.17
XRCC3-210ENST00000554974 TMEM200AQ86VY9 491 aa14.01□□□□□ -0.17
XRCC3-210ENST00000554974 THOC6Q86W42 341 aaKnown RBP14.01□□□□□ -0.17
XRCC3-210ENST00000554974 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.01□□□□□ -0.17
XRCC3-210ENST00000554974 TMEM52Q8NDY8 209 aa14.01□□□□□ -0.17
XRCC3-210ENST00000554974 CREB3L4Q8TEY5 395 aa14.01□□□□□ -0.17
XRCC3-210ENST00000554974 SLC44A1Q8WWI5 657 aa14.01□□□□□ -0.17
XRCC3-210ENST00000554974 ATL1Q8WXF7 558 aa14.01□□□□□ -0.17
XRCC3-210ENST00000554974 NRGNQ92686 78 aa14.01□□□□□ -0.17
XRCC3-210ENST00000554974 RND1Q92730 232 aa14.01□□□□□ -0.17
XRCC3-210ENST00000554974 NCLNQ969V3 563 aa14.01□□□□□ -0.17
XRCC3-210ENST00000554974 VMP1Q96GC9 406 aa14.01□□□□□ -0.17
XRCC3-210ENST00000554974 SMIM10Q96HG1 83 aa14.01□□□□□ -0.17
XRCC3-210ENST00000554974 SEC16BQ96JE7 1060 aa14.01□□□□□ -0.17
XRCC3-210ENST00000554974 AIF1LQ9BQI0 150 aa14.01□□□□□ -0.17
XRCC3-210ENST00000554974 TRIM54Q9BYV2 358 aa14.01□□□□□ -0.17
XRCC3-210ENST00000554974 DEFB127Q9H1M4 99 aa14.01□□□□□ -0.17
XRCC3-210ENST00000554974 TP63Q9H3D4 680 aaPredicted RBP14.01□□□□□ -0.17
XRCC3-210ENST00000554974 PELI2Q9HAT8 420 aa14.01□□□□□ -0.17
XRCC3-210ENST00000554974 PLSCR2Q9NRY7 297 aa14.01□□□□□ -0.17
XRCC3-210ENST00000554974 MTO1Q9Y2Z2 717 aaKnown RBP14.01□□□□□ -0.17
XRCC3-210ENST00000554974 DYRK1BQ9Y463 629 aa14.01□□□□□ -0.17
XRCC3-210ENST00000554974 DNAJC13O75165 2243 aa14□□□□□ -0.17
XRCC3-210ENST00000554974 HRNRQ86YZ3 2850 aaPredicted RBP14□□□□□ -0.17
XRCC3-210ENST00000554974 A0A087WUV0 522 aaPredicted RBP14□□□□□ -0.17
XRCC3-210ENST00000554974 NPEPPSL1A6NEC2 478 aa14□□□□□ -0.17
XRCC3-210ENST00000554974 URADA6NGE7 173 aa14□□□□□ -0.17
XRCC3-210ENST00000554974 G3V3Y1 287 aa14□□□□□ -0.17
XRCC3-210ENST00000554974 FAM155BO75949 473 aa14□□□□□ -0.17
XRCC3-210ENST00000554974 OR2J2O76002 312 aa14□□□□□ -0.17
XRCC3-210ENST00000554974 ENO2P09104 434 aaPredicted RBP14□□□□□ -0.17
XRCC3-210ENST00000554974 ZNF37AP17032 561 aaPredicted RBP14□□□□□ -0.17
XRCC3-210ENST00000554974 SAT1P21673 171 aa14□□□□□ -0.17
XRCC3-210ENST00000554974 MSX1P28360 303 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms