RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 CIDEBQ9UHD4 219 aa16.58■□□□□ 0.25
SHOX-204ENST00000554971 MAPRE3Q9UPY8 281 aa16.58■□□□□ 0.25
SHOX-204ENST00000554971 HEATR5BQ9P2D3 2071 aa16.58■□□□□ 0.24
SHOX-204ENST00000554971 A0A1W2PQM1 296 aa16.58■□□□□ 0.24
SHOX-204ENST00000554971 CXCR6O00574 342 aa16.58■□□□□ 0.24
SHOX-204ENST00000554971 PDYNP01213 254 aa16.58■□□□□ 0.24
SHOX-204ENST00000554971 PNLIPP16233 465 aa16.58■□□□□ 0.24
SHOX-204ENST00000554971 TRPC1P48995 793 aa16.58■□□□□ 0.24
SHOX-204ENST00000554971 ABHD18Q0P651 414 aa16.58■□□□□ 0.24
SHOX-204ENST00000554971 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.58■□□□□ 0.24
SHOX-204ENST00000554971 SUSD1Q6UWL2 747 aa16.58■□□□□ 0.24
SHOX-204ENST00000554971 MSRB3Q8IXL7 192 aa16.58■□□□□ 0.24
SHOX-204ENST00000554971 ATL1Q8WXF7 558 aa16.58■□□□□ 0.24
SHOX-204ENST00000554971 STARD8Q92502 1023 aa16.58■□□□□ 0.24
SHOX-204ENST00000554971 TMBIM1Q969X1 311 aa16.58■□□□□ 0.24
SHOX-204ENST00000554971 TBC1D20Q96BZ9 403 aa16.58■□□□□ 0.24
SHOX-204ENST00000554971 FBXL8Q96CD0 374 aa16.58■□□□□ 0.24
SHOX-204ENST00000554971 FCRL1Q96LA6 429 aa16.58■□□□□ 0.24
SHOX-204ENST00000554971 PAIP1Q9H074 479 aaKnown RBP16.58■□□□□ 0.24
SHOX-204ENST00000554971 SLC25A37Q9NYZ2 338 aa16.58■□□□□ 0.24
SHOX-204ENST00000554971 USP22Q9UPT9 525 aa16.58■□□□□ 0.24
SHOX-204ENST00000554971 RHPN2P1A8MT19 583 aa16.57■□□□□ 0.24
SHOX-204ENST00000554971 G3V2T6 193 aa16.57■□□□□ 0.24
SHOX-204ENST00000554971 PSIP1O75475 530 aaKnown RBP16.57■□□□□ 0.24
SHOX-204ENST00000554971 C1orf105O95561 183 aa16.57■□□□□ 0.24
SHOX-204ENST00000554971 GP1BAP07359 652 aa16.57■□□□□ 0.24
SHOX-204ENST00000554971 FTH1P19P0C7X4 201 aa16.57■□□□□ 0.24
SHOX-204ENST00000554971 THRBP10828 461 aa16.57■□□□□ 0.24
SHOX-204ENST00000554971 ALDH4A1P30038 563 aa16.57■□□□□ 0.24
SHOX-204ENST00000554971 DUSP3P51452 185 aaPredicted RBP16.57■□□□□ 0.24
SHOX-204ENST00000554971 CSTF3Q12996 717 aaKnown RBP16.57■□□□□ 0.24
SHOX-204ENST00000554971 BIRC2Q13490 618 aa16.57■□□□□ 0.24
SHOX-204ENST00000554971 CPSF6Q16630 551 aaKnown RBP eCLIP16.57■□□□□ 0.24
SHOX-204ENST00000554971 RFX4Q33E94 735 aa16.57■□□□□ 0.24
SHOX-204ENST00000554971 RBM48Q5RL73 367 aaKnown RBP16.57■□□□□ 0.24
SHOX-204ENST00000554971 KLHDC8AQ8IYD2 350 aa16.57■□□□□ 0.24
SHOX-204ENST00000554971 Q8N9G6 341 aaPredicted RBP16.57■□□□□ 0.24
SHOX-204ENST00000554971 OR6C4Q8NGE1 309 aa16.57■□□□□ 0.24
SHOX-204ENST00000554971 FIG4Q92562 907 aa16.57■□□□□ 0.24
SHOX-204ENST00000554971 REXO5Q96IC2 774 aaKnown RBP16.57■□□□□ 0.24
SHOX-204ENST00000554971 FERD3LQ96RJ6 166 aa16.57■□□□□ 0.24
SHOX-204ENST00000554971 RBM4BQ9BQ04 359 aaKnown RBP16.57■□□□□ 0.24
SHOX-204ENST00000554971 CPPED1Q9BRF8 314 aaPredicted RBP16.57■□□□□ 0.24
SHOX-204ENST00000554971 RBM4Q9BWF3 364 aaKnown RBP16.57■□□□□ 0.24
SHOX-204ENST00000554971 PIF1Q9H611 641 aa16.57■□□□□ 0.24
SHOX-204ENST00000554971 IGHV1OR21-1A0A087WYE8 117 aa16.57■□□□□ 0.24
SHOX-204ENST00000554971 ARHGEF33A8MVX0 844 aa16.57■□□□□ 0.24
SHOX-204ENST00000554971 SNAP29O95721 258 aa16.57■□□□□ 0.24
SHOX-204ENST00000554971 HSD3B1P14060 373 aa16.57■□□□□ 0.24
SHOX-204ENST00000554971 PRPS1L1P21108 318 aa16.57■□□□□ 0.24
SHOX-204ENST00000554971 HSD3B2P26439 372 aa16.57■□□□□ 0.24
SHOX-204ENST00000554971 GPR3P46089 330 aa16.57■□□□□ 0.24
SHOX-204ENST00000554971 BDKRB1P46663 353 aa16.57■□□□□ 0.24
SHOX-204ENST00000554971 RPS6KA3P51812 740 aa16.57■□□□□ 0.24
SHOX-204ENST00000554971 C21orf58P58505 322 aa16.57■□□□□ 0.24
SHOX-204ENST00000554971 CFHR1Q03591 330 aa16.57■□□□□ 0.24
SHOX-204ENST00000554971 SRSF11Q05519 484 aaKnown RBP16.57■□□□□ 0.24
SHOX-204ENST00000554971 SGO1Q5FBB7 561 aa16.57■□□□□ 0.24
SHOX-204ENST00000554971 NKAIN2Q5VXU1 208 aa16.57■□□□□ 0.24
SHOX-204ENST00000554971 UNC5DQ6UXZ4 953 aa16.57■□□□□ 0.24
SHOX-204ENST00000554971 TMPRSS9Q7Z410 1059 aa16.57■□□□□ 0.24
SHOX-204ENST00000554971 CLEC4FQ8N1N0 589 aa16.57■□□□□ 0.24
SHOX-204ENST00000554971 OR52E1Q8NGJ3 308 aa16.57■□□□□ 0.24
SHOX-204ENST00000554971 FAM162AQ96A26 154 aa16.57■□□□□ 0.24
SHOX-204ENST00000554971 SLC47A1Q96FL8 570 aa16.57■□□□□ 0.24
SHOX-204ENST00000554971 MVB12BQ9H7P6 319 aa16.57■□□□□ 0.24
SHOX-204ENST00000554971 UCK1Q9HA47 277 aa16.57■□□□□ 0.24
SHOX-204ENST00000554971 TMEM9Q9P0T7 183 aa16.57■□□□□ 0.24
SHOX-204ENST00000554971 PLAGL1Q9UM63 463 aa16.57■□□□□ 0.24
SHOX-204ENST00000554971 HEBP2Q9Y5Z4 205 aa16.57■□□□□ 0.24
SHOX-204ENST00000554971 SPTBP11277 2137 aa16.56■□□□□ 0.24
SHOX-204ENST00000554971 LILRA5A6NI73 299 aa16.56■□□□□ 0.24
SHOX-204ENST00000554971 CREG1O75629 220 aa16.56■□□□□ 0.24
SHOX-204ENST00000554971 JUPP14923 745 aa16.56■□□□□ 0.24
SHOX-204ENST00000554971 NELFEP18615 380 aaKnown RBP16.56■□□□□ 0.24
SHOX-204ENST00000554971 SDHBP21912 280 aa16.56■□□□□ 0.24
SHOX-204ENST00000554971 GZMMP51124 257 aa16.56■□□□□ 0.24
SHOX-204ENST00000554971 CLDN6P56747 220 aa16.56■□□□□ 0.24
SHOX-204ENST00000554971 PTCHD3Q3KNS1 767 aa16.56■□□□□ 0.24
SHOX-204ENST00000554971 CCDC157Q569K6 752 aa16.56■□□□□ 0.24
SHOX-204ENST00000554971 FRG2Q64ET8 278 aa16.56■□□□□ 0.24
SHOX-204ENST00000554971 DHRS4L2Q6PKH6 230 aa16.56■□□□□ 0.24
SHOX-204ENST00000554971 RBM12BQ8IXT5 1001 aaKnown RBP16.56■□□□□ 0.24
SHOX-204ENST00000554971 LMNTD1Q8N9Z9 388 aa16.56■□□□□ 0.24
SHOX-204ENST00000554971 AVL9Q8NBF6 648 aa16.56■□□□□ 0.24
SHOX-204ENST00000554971 RSC1A1Q92681 617 aa16.56■□□□□ 0.24
SHOX-204ENST00000554971 TMIGD2Q96BF3 282 aa16.56■□□□□ 0.24
SHOX-204ENST00000554971 FAM120BQ96EK7 910 aaKnown RBP16.56■□□□□ 0.24
SHOX-204ENST00000554971 FBXL20Q96IG2 436 aa16.56■□□□□ 0.24
SHOX-204ENST00000554971 FRG2BQ96QU4 278 aa16.56■□□□□ 0.24
SHOX-204ENST00000554971 SLC38A3Q99624 504 aa16.56■□□□□ 0.24
SHOX-204ENST00000554971 NPLQ9BXD5 320 aaPredicted RBP16.56■□□□□ 0.24
SHOX-204ENST00000554971 TRIT1Q9H3H1 467 aaKnown RBP16.56■□□□□ 0.24
SHOX-204ENST00000554971 SERHLQ9NQF3 203 aa16.56■□□□□ 0.24
SHOX-204ENST00000554971 PCDHB14Q9Y5E9 798 aa16.56■□□□□ 0.24
SHOX-204ENST00000554971 PCDHGA1Q9Y5H4 931 aa16.56■□□□□ 0.24
SHOX-204ENST00000554971 AP1M2Q9Y6Q5 423 aa16.56■□□□□ 0.24
SHOX-204ENST00000554971 COLEC10Q9Y6Z7 277 aa16.56■□□□□ 0.24
SHOX-204ENST00000554971 RFPL3O75679 317 aa16.55■□□□□ 0.24
SHOX-204ENST00000554971 CST1P01037 141 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms