RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 ATP2C2O75185 946 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 SPAG7O75391 227 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 CELA2AP08217 269 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 SRCP12931 536 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 PTPN3P26045 913 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 CD38P28907 300 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 SSTR1P30872 391 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 STX2P32856 288 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 RPA3P35244 121 aaPredicted RBP4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 MAGEA6P43360 314 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 CCR10P46092 362 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 RGS7P49802 495 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 CRYBB1P53674 252 aaPredicted RBP4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 CDH6P55285 790 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 NANOS3P60323 173 aaKnown RBP4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 NCALDP61601 193 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 YWHAZP63104 245 aaKnown RBP4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 ELF3P78545 371 aaPredicted RBP4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 ELP6Q0PNE2 266 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 BNIP1Q12981 228 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 CHIT1Q13231 466 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 SNTB1Q13884 538 aaKnown RBP4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 PCLAFQ15004 111 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 PDK2Q15119 407 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 RPE65Q16518 533 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 CA9Q16790 459 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 SOWAHAQ2M3V2 549 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 GOLGA7BQ2TAP0 167 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 DCAF4L1Q3SXM0 396 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 SYTL3Q4VX76 610 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 SLC39A12Q504Y0 691 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 HEPHL1Q6MZM0 1159 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 KLC3Q6P597 504 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 TMEM81Q6P7N7 255 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 SH2D5Q6ZV89 423 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 MOB3CQ70IA8 216 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 SLC24A5Q71RS6 500 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 CCDC80Q76M96 950 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 SPATA21Q7Z572 469 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 ADCK2Q7Z695 626 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 ACOT1Q86TX2 421 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 ECHDC2Q86YB7 292 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 IL17RCQ8NAC3 791 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 ATAD1Q8NBU5 361 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 FBXO36Q8NEA4 188 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 CADM4Q8NFZ8 388 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 WIPF2Q8TF74 440 aaPredicted RBP4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 DUSP19Q8WTR2 217 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 PYROXD1Q8WU10 500 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 TEKT4Q8WW24 435 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 DYDC1Q8WWB3 177 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 IGFBPL1Q8WX77 278 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 C18orf25Q96B23 403 aaPredicted RBP4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 FAF2Q96CS3 445 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 SNRNP25Q9BV90 132 aaKnown RBP4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 MRPL1Q9BYD6 325 aaKnown RBP4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 WNT5BQ9H1J7 359 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 PLAC1Q9HBJ0 212 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 THSD1Q9NS62 852 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 GPATCH2LQ9NWQ4 482 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 NKIRAS1Q9NYS0 192 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 SENP1Q9P0U3 644 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 PSMC3IPQ9P2W1 217 aaPredicted RBP4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 TUBGCP4Q9UGJ1 667 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 LEF1Q9UJU2 399 aaPredicted RBP4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 ARL2BPQ9Y2Y0 163 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 RAP2CQ9Y3L5 183 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 ASB3Q9Y575 518 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 SNX9Q9Y5X1 595 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 TEX264Q9Y6I9 313 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 ARHGEF17Q96PE2 2063 aaPredicted RBP4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 LAMA1P25391 3075 aa4.99□□□□□ -1.61
MTHFD1-206ENST00000554353 C2orf16Q68DN1 1984 aa4.98□□□□□ -1.61
MTHFD1-206ENST00000554353 CACNA1HO95180 2353 aa4.98□□□□□ -1.61
MTHFD1-206ENST00000554353 TDRD15B5MCY1 1934 aaKnown RBP4.98□□□□□ -1.61
MTHFD1-206ENST00000554353 MTCL1Q9Y4B5 1905 aaKnown RBP4.98□□□□□ -1.61
MTHFD1-206ENST00000554353 A8MZ25 164 aa4.98□□□□□ -1.61
MTHFD1-206ENST00000554353 LOC730098B7Z3J9 87 aa4.98□□□□□ -1.61
MTHFD1-206ENST00000554353 H0YHG0 523 aa4.98□□□□□ -1.61
MTHFD1-206ENST00000554353 SLC33A1O00400 549 aaPredicted RBP4.98□□□□□ -1.61
MTHFD1-206ENST00000554353 PIRO00625 290 aa4.98□□□□□ -1.61
MTHFD1-206ENST00000554353 ANGPT2O15123 496 aa4.98□□□□□ -1.61
MTHFD1-206ENST00000554353 CHADO15335 359 aa4.98□□□□□ -1.61
MTHFD1-206ENST00000554353 VEGFDO43915 354 aa4.98□□□□□ -1.61
MTHFD1-206ENST00000554353 CYTIPO60759 359 aa4.98□□□□□ -1.61
MTHFD1-206ENST00000554353 EDF1O60869 148 aaKnown RBP4.98□□□□□ -1.61
MTHFD1-206ENST00000554353 GRAP2O75791 330 aa4.98□□□□□ -1.61
MTHFD1-206ENST00000554353 PIAS1O75925 651 aa4.98□□□□□ -1.61
MTHFD1-206ENST00000554353 DARSP14868 501 aaKnown RBP4.98□□□□□ -1.61
MTHFD1-206ENST00000554353 ELK3P41970 407 aa4.98□□□□□ -1.61
MTHFD1-206ENST00000554353 SLC15A1P46059 708 aa4.98□□□□□ -1.61
MTHFD1-206ENST00000554353 PITPNBP48739 271 aa4.98□□□□□ -1.61
MTHFD1-206ENST00000554353 DHPSP49366 369 aaPredicted RBP4.98□□□□□ -1.61
MTHFD1-206ENST00000554353 CLCNKBP51801 687 aa4.98□□□□□ -1.61
MTHFD1-206ENST00000554353 ARSFP54793 590 aa4.98□□□□□ -1.61
MTHFD1-206ENST00000554353 TMPRSS3P57727 454 aa4.98□□□□□ -1.61
MTHFD1-206ENST00000554353 TRA2BP62995 288 aaKnown RBP4.98□□□□□ -1.61
MTHFD1-206ENST00000554353 IL9RQ01113 521 aa4.98□□□□□ -1.61
MTHFD1-206ENST00000554353 SLC18A2Q05940 514 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms