RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 PLPP1O14494 284 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 VILLO15195 856 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 ACOX3O15254 700 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 TNFSF14O43557 240 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 OR1F1O43749 312 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 CPSF4O95639 269 aaKnown RBP6.96□□□□□ -1.3
ATXN3-221ENST00000553498 GSNP06396 782 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 ZNF10P21506 573 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-221ENST00000553498 UQCRC2P22695 453 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 TPP2P29144 1249 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-221ENST00000553498 CD6P30203 668 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 MAT2AP31153 395 aaKnown RBP6.96□□□□□ -1.3
ATXN3-221ENST00000553498 ACSL1P33121 698 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 KDELR2P33947 212 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 ACTR1BP42025 376 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 FRKP42685 505 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-221ENST00000553498 CDKN2CP42773 168 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 ANXA11P50995 505 aaKnown RBP6.96□□□□□ -1.3
ATXN3-221ENST00000553498 ALDH3A2P51648 485 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 SH3BGRP55822 239 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-221ENST00000553498 ACTR1AP61163 376 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 YBX1P67809 324 aaKnown RBP6.96□□□□□ -1.3
ATXN3-221ENST00000553498 TUBA4AP68366 448 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 SIM2Q14190 667 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-221ENST00000553498 SLC9A5Q14940 896 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 RGNQ15493 299 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 SF1Q15637 639 aaKnown RBP6.96□□□□□ -1.3
ATXN3-221ENST00000553498 LEXMQ3ZCV2 418 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 GTDC1Q4AE62 458 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 OR4C11Q6IEV9 310 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 ZNF425Q6IV72 752 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 KRT80Q6KB66 452 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 ALKBH2Q6NS38 261 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 ZCCHC8Q6NZY4 707 aaKnown RBP6.96□□□□□ -1.3
ATXN3-221ENST00000553498 BHLHB9Q6PI77 547 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 DNAJC14Q6Y2X3 702 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-221ENST00000553498 CBLL1Q75N03 491 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 CCDC80Q76M96 950 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 EIF3MQ7L2H7 374 aaKnown RBP6.96□□□□□ -1.3
ATXN3-221ENST00000553498 AMIGO2Q86SJ2 522 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 FAM124AQ86V42 546 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 IQCHQ86VS3 1027 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 ANKRD46Q86W74 232 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 CARM1Q86X55 608 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 ZC3H7AQ8IWR0 971 aaKnown RBP6.96□□□□□ -1.3
ATXN3-221ENST00000553498 CHERPQ8IWX8 916 aaKnown RBP6.96□□□□□ -1.3
ATXN3-221ENST00000553498 ZZZ3Q8IYH5 903 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 SDR16C5Q8N3Y7 309 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 GALNT4Q8N4A0 578 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 RNF175Q8N4F7 328 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 MFSD9Q8NBP5 474 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 ZNF740Q8NDX6 193 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 CADM4Q8NFZ8 388 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 OR2L5Q8NG80 312 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 CDC26Q8NHZ8 85 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 PSMA8Q8TAA3 256 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 GPBAR1Q8TDU6 330 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 CREB3L4Q8TEY5 395 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 LCN9Q8WX39 176 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 GFM2Q969S9 779 aaKnown RBP6.96□□□□□ -1.3
ATXN3-221ENST00000553498 MIEF2Q96C03 454 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 TM4SF18Q96CE8 201 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 AURKBQ96GD4 344 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-221ENST00000553498 TRAPPC9Q96Q05 1148 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 SEPHS2Q99611 448 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 RBM4BQ9BQ04 359 aaKnown RBP6.96□□□□□ -1.3
ATXN3-221ENST00000553498 IER2Q9BTL4 223 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 ACAT2Q9BWD1 397 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 RBM4Q9BWF3 364 aaKnown RBP6.96□□□□□ -1.3
ATXN3-221ENST00000553498 ZNF717Q9BY31 904 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-221ENST00000553498 NLNQ9BYT8 704 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 TRIM8Q9BZR9 551 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 SLC6A17Q9H1V8 727 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 CHST8Q9H2A9 424 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 SEMA6AQ9H2E6 1030 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 SPNS1Q9H2V7 528 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 SRMSQ9H3Y6 488 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 IL1RAPQ9NPH3 570 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 PRDM8Q9NQV8 689 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 GPR27Q9NS67 375 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 PNPLA3Q9NST1 481 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 LYARQ9NX58 379 aaKnown RBP6.96□□□□□ -1.3
ATXN3-221ENST00000553498 SMPD3Q9NY59 655 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-221ENST00000553498 TBC1D29Q9UFV1 150 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 PLAGL1Q9UM63 463 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 OAZ3Q9UMX2 235 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 DUSP12Q9UNI6 340 aa6.96□□□□□ -1.3
ATXN3-221ENST00000553498 FAF1Q9UNN5 650 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-221ENST00000553498 EXO1Q9UQ84 846 aaKnown RBP6.96□□□□□ -1.3
ATXN3-221ENST00000553498 CFAP20Q9Y6A4 193 aaKnown RBP6.96□□□□□ -1.3
ATXN3-221ENST00000553498 A0A0A6YYD5 115 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 SPTY2D1-AS1A0A0U1RR47 76 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 SMIM31A0A1B0GVY4 71 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 A0A1W2PPC4 97 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 C7orf72A4D263 438 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 SHISA7A6NL88 538 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 OR52A4PA6NMU1 304 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 GNGT2O14610 69 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 PDPK1O15530 556 aa6.95□□□□□ -1.3
ATXN3-221ENST00000553498 NOBOXO60393 691 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms