RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 HYAL4Q2M3T9 481 aa10.54□□□□□ -0.72
SUPT16H-202ENST00000552829 AARS2Q5JTZ9 985 aaKnown RBP10.54□□□□□ -0.72
SUPT16H-202ENST00000552829 CTSL3PQ5NE16 218 aa10.54□□□□□ -0.72
SUPT16H-202ENST00000552829 UBAP2Q5T6F2 1119 aaKnown RBP10.54□□□□□ -0.72
SUPT16H-202ENST00000552829 NDUFAF5Q5TEU4 345 aa10.54□□□□□ -0.72
SUPT16H-202ENST00000552829 BRICD5Q6PL45 260 aa10.54□□□□□ -0.72
SUPT16H-202ENST00000552829 QSOX2Q6ZRP7 698 aa10.54□□□□□ -0.72
SUPT16H-202ENST00000552829 ADCK2Q7Z695 626 aa10.54□□□□□ -0.72
SUPT16H-202ENST00000552829 SLC22A16Q86VW1 577 aa10.54□□□□□ -0.72
SUPT16H-202ENST00000552829 TMEM156Q8N614 296 aa10.54□□□□□ -0.72
SUPT16H-202ENST00000552829 EIF1ADQ8N9N8 165 aaKnown RBP10.54□□□□□ -0.72
SUPT16H-202ENST00000552829 CAMKVQ8NCB2 501 aa10.54□□□□□ -0.72
SUPT16H-202ENST00000552829 FBXO15Q8NCQ5 510 aaPredicted RBP10.54□□□□□ -0.72
SUPT16H-202ENST00000552829 ZCCHC10Q8TBK6 192 aa10.54□□□□□ -0.72
SUPT16H-202ENST00000552829 PEX13Q92968 403 aa10.54□□□□□ -0.72
SUPT16H-202ENST00000552829 BIRC8Q96P09 236 aa10.54□□□□□ -0.72
SUPT16H-202ENST00000552829 RAB6BQ9NRW1 208 aa10.54□□□□□ -0.72
SUPT16H-202ENST00000552829 CATSPERZQ9NTU4 200 aa10.54□□□□□ -0.72
SUPT16H-202ENST00000552829 KCMF1Q9P0J7 381 aa10.54□□□□□ -0.72
SUPT16H-202ENST00000552829 PCDHGB3Q9Y5G1 929 aa10.54□□□□□ -0.72
SUPT16H-202ENST00000552829 CUBNO60494 3623 aa10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 HEATR5AQ86XA9 2040 aa10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 ZNF860A6NHJ4 632 aa10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 ZNF839A8K0R7 811 aa10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 CLCA1A8K7I4 914 aa10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 RNF212BA8MTL3 300 aa10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 ACOT7O00154 380 aa10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 TP73O15350 636 aa10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 CD3EAPO15446 510 aaKnown RBP10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 CHST10O43529 356 aa10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 LCMT2O60294 686 aaKnown RBP10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 BANF1O75531 89 aa10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 ZNF189O75820 626 aaPredicted RBP10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 GABRA1P14867 456 aa10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 ENDOUP21128 410 aaKnown RBP10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 HRH2P25021 359 aa10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 STIP1P31948 543 aaKnown RBP10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 MAGEA5P43359 124 aa10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 SSR4P51571 173 aa10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 CLCN2P51788 898 aa10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 GPR143P51810 404 aa10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 PLGLB1Q02325 96 aa10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 CAV1Q03135 178 aa10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 CDH17Q12864 832 aa10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 MORF4L2Q15014 288 aa10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 UAP1Q16222 522 aaPredicted RBP10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 LINC00523Q86TU6 105 aa10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 SLC26A11Q86WA9 606 aa10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 GPALPP1Q8IXQ4 340 aa10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 PPIL6Q8IXY8 311 aa10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 CYP4X1Q8N118 509 aa10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 FAM109AQ8N4B1 249 aa10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 NAXEQ8NCW5 288 aa10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 ARMC2Q8NEN0 867 aa10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 B3GNT7Q8NFL0 401 aa10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 UHMK1Q8TAS1 419 aaKnown RBP10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 LINC01560Q8TB33 94 aa10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 SARAFQ96BY9 339 aa10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 Q96MF0 132 aa10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 PTCHD1Q96NR3 888 aa10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 ATG10Q9H0Y0 220 aa10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 ETNK1Q9HBU6 452 aa10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 SAYSD1Q9NPB0 183 aa10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 GALPQ9UBC7 116 aa10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 ACAD8Q9UKU7 415 aa10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 YARS2Q9Y2Z4 477 aaKnown RBP10.53□□□□□ -0.72
SUPT16H-202ENST00000552829 TRBV11-1A0A0K0K1C0 115 aa10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 TUBAL3A6NHL2 446 aa10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 SMAD7O15105 426 aaKnown RBP10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 SLC16A5O15375 505 aa10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 PRKNO60260 465 aaPredicted RBP10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 GALR3O60755 368 aaPredicted RBP10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 B4GALT2O60909 372 aa10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 CATP04040 527 aaKnown RBP10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 CELA3AP09093 270 aa10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 CNR1P21554 472 aa10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 JAK1P23458 1154 aa10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 HSD17B3P37058 310 aa10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 GRIA1P42261 906 aa10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 SKIV2L2P42285 1042 aaKnown RBP10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 PRAMEP78395 509 aa10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 KCNJ11Q14654 390 aa10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 KLHL38Q2WGJ6 581 aa10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 ACSBG2Q5FVE4 666 aa10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 XKR6Q5GH73 641 aa10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 HP1BP3Q5SSJ5 553 aaPredicted RBP10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 WLSQ5T9L3 541 aa10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 ASPGQ86U10 573 aa10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 KIF18BQ86Y91 864 aa10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 P3H2Q8IVL5 708 aa10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 ULK2Q8IYT8 1036 aa10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 MPP5Q8N3R9 675 aa10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 MREGQ8N565 214 aa10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 NAT8LQ8N9F0 302 aa10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 SLC13A3Q8WWT9 602 aa10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 LRRC46Q96FV0 321 aa10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 ZIM3Q96PE6 472 aa10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 TXLNGYQ9BZA5 131 aa10.52□□□□□ -0.73
SUPT16H-202ENST00000552829 FAM129AQ9BZQ8 928 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms